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The map label for this gene is spsC [H]

Identifier: 238916046

GI number: 238916046

Start: 85018

End: 86208

Strand: Direct

Name: spsC [H]

Synonym: EUBELI_00079

Alternate gene names: 238916046

Gene position: 85018-86208 (Clockwise)

Preceding gene: 238916045

Following gene: 238916047

Centisome position: 3.97

GC content: 39.8

Gene sequence:

>1191_bases
ATGAATATTTTATTTTCACCACCAGATATAACCGAGGAAGAGATTCAGGCAGTTTCTGAGGCTTTAAGGTCAGGATGGAT
TACAACAGGTCCAAGAACTAAAGAGTTTGAAAGAAATATTGCTCAGTTTACAGGCTGTAACAGGGCGGCATGTCTCAATT
CAGCTACAGCATGTCTTGAGACTGCACTCCGCCTGTTAGGAATCGGTGAGGGCGATGAGGTTATTGTACCGGCATACACT
TATACAGCATCTGCAAGTGTCGTTGCGCATGTTAATGCAAAGCTTGTTCTTATTGATGTTGAAAAGGACACATATCACCT
TGATTATGACGCGCTTGAAGCTGCAATTAATGAGAGTACCAAGGCTGTAATACCTGTAGATATAGGTGGTGTTATGGTTG
ACTATGACAGGATAAGAAAGATTGTCGAGAGTAAAAAGAATATATTTAAGGCTTCAACACCCCTTCAGGAGGCACTTGGC
AGAGTTGCAATTGTTGCTGATTCTGCACATGGTTTCGGAGCAAGTGAGGGTGGTGTTATGAGTGGAATGAAGGCTGACTT
TACAAGCTTTTCATTTCATGCAGTCAAGAACCTTACAACAGCAGAAGGCGGAGCTCTTACATGGAGAAGTATTCCGGGAG
TTGATGATGAGGATATATATAAGCAGATAATGCTTTACTCACTTCACGGACAGTCTAAGGATGCGCTTGCAAAGACTAAG
CTTGGTGCATGGGAATATGATATCAAAGGAACTTATTACAAATGTAACATGACTGATATTATGGCTTCTATTGGGCTTGT
ACAGCTTAAGAGATATCCGGGACTTCTTAAGAGAAGAAGAGATATAATTGAGAGATATACACAAGGGATTGCAGCCGATG
ATGTGGATATTATGAAGCATTTTACAGATGAATATACTTCAAGTGGTCATCTGTATCTTGTAAGGCTTCTTGGAAAGGAT
GTTAAGGAGCGTAATGAACTGATTACAAGACTTGCTGAGGCAGGTGTTGCAACTAATGTACATTATAAGCCGCTTCCAAT
GCATACGGCATATAAGAACATGGGATTTGATATTAAGGATTTTCCACATTCATATAATATGTATCGTAATGAGATTACAC
TGCCGCTTCATACATGTCTTACTGATGAACAGGTAGAATATGTAATAGAGCAGTTTAACAGAATGAAATAA

Upstream 100 bases:

>100_bases
GAGGTACCCAGGAGACTACAACACAGGTACAGGTTCCAACAGTCACTCCTGCAACAACAAAGTCATCTACAAAGCAGAGT
ACGAAAAGGAGATAAGAGTT

Downstream 100 bases:

>100_bases
TCGGACATTAGTTATACAACAACAAAAAGGGGATTGATTACGATGGAGTTAAGACCATGGCAGCTTCTTCCTGATGAAAT
GAGAACTAAGGAAGTAAGAA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 396; Mature: 396

Protein sequence:

>396_residues
MNILFSPPDITEEEIQAVSEALRSGWITTGPRTKEFERNIAQFTGCNRAACLNSATACLETALRLLGIGEGDEVIVPAYT
YTASASVVAHVNAKLVLIDVEKDTYHLDYDALEAAINESTKAVIPVDIGGVMVDYDRIRKIVESKKNIFKASTPLQEALG
RVAIVADSAHGFGASEGGVMSGMKADFTSFSFHAVKNLTTAEGGALTWRSIPGVDDEDIYKQIMLYSLHGQSKDALAKTK
LGAWEYDIKGTYYKCNMTDIMASIGLVQLKRYPGLLKRRRDIIERYTQGIAADDVDIMKHFTDEYTSSGHLYLVRLLGKD
VKERNELITRLAEAGVATNVHYKPLPMHTAYKNMGFDIKDFPHSYNMYRNEITLPLHTCLTDEQVEYVIEQFNRMK

Sequences:

>Translated_396_residues
MNILFSPPDITEEEIQAVSEALRSGWITTGPRTKEFERNIAQFTGCNRAACLNSATACLETALRLLGIGEGDEVIVPAYT
YTASASVVAHVNAKLVLIDVEKDTYHLDYDALEAAINESTKAVIPVDIGGVMVDYDRIRKIVESKKNIFKASTPLQEALG
RVAIVADSAHGFGASEGGVMSGMKADFTSFSFHAVKNLTTAEGGALTWRSIPGVDDEDIYKQIMLYSLHGQSKDALAKTK
LGAWEYDIKGTYYKCNMTDIMASIGLVQLKRYPGLLKRRRDIIERYTQGIAADDVDIMKHFTDEYTSSGHLYLVRLLGKD
VKERNELITRLAEAGVATNVHYKPLPMHTAYKNMGFDIKDFPHSYNMYRNEITLPLHTCLTDEQVEYVIEQFNRMK
>Mature_396_residues
MNILFSPPDITEEEIQAVSEALRSGWITTGPRTKEFERNIAQFTGCNRAACLNSATACLETALRLLGIGEGDEVIVPAYT
YTASASVVAHVNAKLVLIDVEKDTYHLDYDALEAAINESTKAVIPVDIGGVMVDYDRIRKIVESKKNIFKASTPLQEALG
RVAIVADSAHGFGASEGGVMSGMKADFTSFSFHAVKNLTTAEGGALTWRSIPGVDDEDIYKQIMLYSLHGQSKDALAKTK
LGAWEYDIKGTYYKCNMTDIMASIGLVQLKRYPGLLKRRRDIIERYTQGIAADDVDIMKHFTDEYTSSGHLYLVRLLGKD
VKERNELITRLAEAGVATNVHYKPLPMHTAYKNMGFDIKDFPHSYNMYRNEITLPLHTCLTDEQVEYVIEQFNRMK

Specific function: Unknown

COG id: COG0399

COG function: function code M; Predicted pyridoxal phosphate-dependent enzyme apparently involved in regulation of cell wall biogenesis

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the degT/dnrJ/eryC1 family [H]

Homologues:

Organism=Escherichia coli, GI145693159, Length=393, Percent_Identity=32.5699745547074, Blast_Score=192, Evalue=3e-50,
Organism=Escherichia coli, GI2367285, Length=350, Percent_Identity=27.4285714285714, Blast_Score=123, Evalue=2e-29,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000653
- InterPro:   IPR015424
- InterPro:   IPR015421
- InterPro:   IPR015422 [H]

Pfam domain/function: PF01041 DegT_DnrJ_EryC1 [H]

EC number: NA

Molecular weight: Translated: 44146; Mature: 44146

Theoretical pI: Translated: 5.98; Mature: 5.98

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
3.0 %Met     (Translated Protein)
4.3 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
3.0 %Met     (Mature Protein)
4.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNILFSPPDITEEEIQAVSEALRSGWITTGPRTKEFERNIAQFTGCNRAACLNSATACLE
CCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHCCCCHHHHHHHHHHHHH
TALRLLGIGEGDEVIVPAYTYTASASVVAHVNAKLVLIDVEKDTYHLDYDALEAAINEST
HHHHHHCCCCCCCEEEEEEEEECCCEEEEEECEEEEEEEECCCCEECCHHHHHHHHCCCC
KAVIPVDIGGVMVDYDRIRKIVESKKNIFKASTPLQEALGRVAIVADSAHGFGASEGGVM
CEEEEEECCCEEECHHHHHHHHHHHHHHEECCCCHHHHCCCEEEEEECCCCCCCCCCCCC
SGMKADFTSFSFHAVKNLTTAEGGALTWRSIPGVDDEDIYKQIMLYSLHGQSKDALAKTK
CCCCCCCCCCHHHHHHCCCCCCCCEEEECCCCCCCHHHHHHHHHHHHCCCCCCHHHHHHH
LGAWEYDIKGTYYKCNMTDIMASIGLVQLKRYPGLLKRRRDIIERYTQGIAADDVDIMKH
CCCEEEECCCEEEECCHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHCCCCCCCHHHHHH
FTDEYTSSGHLYLVRLLGKDVKERNELITRLAEAGVATNVHYKPLPMHTAYKNMGFDIKD
HHHHHCCCCCEEEEEHHCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHCCCCHHC
FPHSYNMYRNEITLPLHTCLTDEQVEYVIEQFNRMK
CCCCHHHHHCEEEEEHHHHCCHHHHHHHHHHHHCCC
>Mature Secondary Structure
MNILFSPPDITEEEIQAVSEALRSGWITTGPRTKEFERNIAQFTGCNRAACLNSATACLE
CCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHCCCCHHHHHHHHHHHHH
TALRLLGIGEGDEVIVPAYTYTASASVVAHVNAKLVLIDVEKDTYHLDYDALEAAINEST
HHHHHHCCCCCCCEEEEEEEEECCCEEEEEECEEEEEEEECCCCEECCHHHHHHHHCCCC
KAVIPVDIGGVMVDYDRIRKIVESKKNIFKASTPLQEALGRVAIVADSAHGFGASEGGVM
CEEEEEECCCEEECHHHHHHHHHHHHHHEECCCCHHHHCCCEEEEEECCCCCCCCCCCCC
SGMKADFTSFSFHAVKNLTTAEGGALTWRSIPGVDDEDIYKQIMLYSLHGQSKDALAKTK
CCCCCCCCCCHHHHHHCCCCCCCCEEEECCCCCCCHHHHHHHHHHHHCCCCCCHHHHHHH
LGAWEYDIKGTYYKCNMTDIMASIGLVQLKRYPGLLKRRRDIIERYTQGIAADDVDIMKH
CCCEEEECCCEEEECCHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHCCCCCCCHHHHHH
FTDEYTSSGHLYLVRLLGKDVKERNELITRLAEAGVATNVHYKPLPMHTAYKNMGFDIKD
HHHHHCCCCCEEEEEHHCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHCCCCHHC
FPHSYNMYRNEITLPLHTCLTDEQVEYVIEQFNRMK
CCCCHHHHHCEEEEEHHHHCCHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 7934828; 9384377 [H]