| Definition | Eubacterium eligens ATCC 27750 chromosome, complete genome. |
|---|---|
| Accession | NC_012778 |
| Length | 2,144,190 |
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The map label for this gene is 238916040
Identifier: 238916040
GI number: 238916040
Start: 78320
End: 79390
Strand: Direct
Name: 238916040
Synonym: EUBELI_00073
Alternate gene names: NA
Gene position: 78320-79390 (Clockwise)
Preceding gene: 238916038
Following gene: 238916041
Centisome position: 3.65
GC content: 40.71
Gene sequence:
>1071_bases ATGGGTGAAAATGTGTGGGATTTCAGGAAGCGGCTGACATTGCTTTTTGGCAGTGCCGTTATTATTGCGGTGGTTTTCTT TATATTCAAGGTGCTTTTTTATTATGTGTGGCCGTTCATGCTTGCATTCTGTTTTGCGGTGCTGCTTCAGAAGCCGATAG TGGGGCTGGCGAAACTTTTAAGGGAGAAAAAGACTCTTGCTGCGAGTATAGTTGTAACAATGGTGACGCTTATAATTCTT TCAGTGCTGTTGTATGTCGGTTATATGGCGTTTCGCGAACTTAAAGATTTCATAGCTAATTTTGATGAGAACATTAACAG CCTTGATGGGCAGTTTAAGCTTGTATGCTGCCGTATTGATGGCTGGATTAAGTTGAAAGAAGGCTGCAGTTACGCATTTT TTGAAAAATGTAAAGGGATAATTATAGATGGAGACGGACAGCAGATGTTCTTTACAATTATGAGAAAACATTCTGTTCCG GTTATAACATGGTGCGTTATGGCGGTTGCCGGACTTGTGGTGTGCTTTATTGGAACGATATATGCGGCGGCTGGAATTGA GAAGTACAGAAGCTGGCGGGAGAACACTATATTTAAGGGCGAAGTCGGGGCGGTGCATGTGGGACTTCGCAATTTGATAA ATGTATATTTCAGGGTGCAGCTTATTATAATGTCGATAAATATTGTGGTGTGTTCAACAGCATTTTTAATGATAGGCAAT CCTTATGCGATTCTTCTTGGTGTGCTGACTGGGATTATTGACGCACTTCCGATATTTGGTACGGGAACAGTACTGATACC ATGGGCTGTGGGAAGCCTGCTTTTCGGACATGTGAAAAATGCGGTGATTCTTGTGGTGTTGTATATTGTCACATATTTTG TGAGGGAGATTATGGAGTCAAAATGTATGGGTGACAGAATGGGAATTGCACCATTTACAATGCTTGCGGTTATATATATC GGGATACTTGTGTATGGGGTTGTCGGATTTATTCTTGGACCAATATCATATTGTATAATAAAAGCACTTGTTCTTTACTT GAAAAGCATTTTAGAACATGATAAACTCTAG
Upstream 100 bases:
>100_bases ACATGCGTTTTAATAATTAATCAACAACATTCGGCGAATAAATGTCCCAGCCACGCACACACTAATTAAACGATAAGTAT TAGCAGGTGTGAGGTGGCAT
Downstream 100 bases:
>100_bases TGGTGCCGTCAATGGCAGGCGGACAATGCGAAGCAGCATTCGCATCAGGCTCCGTATGAAACGGGTCTGTAATGTCATAG AAAGAGGTTTATTATGGCAG
Product: hypothetical protein
Products: NA
Alternate protein names: ORF2 [H]
Number of amino acids: Translated: 356; Mature: 355
Protein sequence:
>356_residues MGENVWDFRKRLTLLFGSAVIIAVVFFIFKVLFYYVWPFMLAFCFAVLLQKPIVGLAKLLREKKTLAASIVVTMVTLIIL SVLLYVGYMAFRELKDFIANFDENINSLDGQFKLVCCRIDGWIKLKEGCSYAFFEKCKGIIIDGDGQQMFFTIMRKHSVP VITWCVMAVAGLVVCFIGTIYAAAGIEKYRSWRENTIFKGEVGAVHVGLRNLINVYFRVQLIIMSINIVVCSTAFLMIGN PYAILLGVLTGIIDALPIFGTGTVLIPWAVGSLLFGHVKNAVILVVLYIVTYFVREIMESKCMGDRMGIAPFTMLAVIYI GILVYGVVGFILGPISYCIIKALVLYLKSILEHDKL
Sequences:
>Translated_356_residues MGENVWDFRKRLTLLFGSAVIIAVVFFIFKVLFYYVWPFMLAFCFAVLLQKPIVGLAKLLREKKTLAASIVVTMVTLIIL SVLLYVGYMAFRELKDFIANFDENINSLDGQFKLVCCRIDGWIKLKEGCSYAFFEKCKGIIIDGDGQQMFFTIMRKHSVP VITWCVMAVAGLVVCFIGTIYAAAGIEKYRSWRENTIFKGEVGAVHVGLRNLINVYFRVQLIIMSINIVVCSTAFLMIGN PYAILLGVLTGIIDALPIFGTGTVLIPWAVGSLLFGHVKNAVILVVLYIVTYFVREIMESKCMGDRMGIAPFTMLAVIYI GILVYGVVGFILGPISYCIIKALVLYLKSILEHDKL >Mature_355_residues GENVWDFRKRLTLLFGSAVIIAVVFFIFKVLFYYVWPFMLAFCFAVLLQKPIVGLAKLLREKKTLAASIVVTMVTLIILS VLLYVGYMAFRELKDFIANFDENINSLDGQFKLVCCRIDGWIKLKEGCSYAFFEKCKGIIIDGDGQQMFFTIMRKHSVPV ITWCVMAVAGLVVCFIGTIYAAAGIEKYRSWRENTIFKGEVGAVHVGLRNLINVYFRVQLIIMSINIVVCSTAFLMIGNP YAILLGVLTGIIDALPIFGTGTVLIPWAVGSLLFGHVKNAVILVVLYIVTYFVREIMESKCMGDRMGIAPFTMLAVIYIG ILVYGVVGFILGPISYCIIKALVLYLKSILEHDKL
Specific function: Unknown
COG id: COG0628
COG function: function code R; Predicted permease
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the UPF0118 (perM) family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR014227 - InterPro: IPR002549 [H]
Pfam domain/function: PF01594 UPF0118 [H]
EC number: NA
Molecular weight: Translated: 39870; Mature: 39739
Theoretical pI: Translated: 9.04; Mature: 9.04
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.8 %Cys (Translated Protein) 3.7 %Met (Translated Protein) 6.5 %Cys+Met (Translated Protein) 2.8 %Cys (Mature Protein) 3.4 %Met (Mature Protein) 6.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGENVWDFRKRLTLLFGSAVIIAVVFFIFKVLFYYVWPFMLAFCFAVLLQKPIVGLAKLL CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH REKKTLAASIVVTMVTLIILSVLLYVGYMAFRELKDFIANFDENINSLDGQFKLVCCRID HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHCCCCCEEEEEEECC GWIKLKEGCSYAFFEKCKGIIIDGDGQQMFFTIMRKHSVPVITWCVMAVAGLVVCFIGTI CCEEECCCCCHHHHHHCCCEEEECCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHH YAAAGIEKYRSWRENTIFKGEVGAVHVGLRNLINVYFRVQLIIMSINIVVCSTAFLMIGN HHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC PYAILLGVLTGIIDALPIFGTGTVLIPWAVGSLLFGHVKNAVILVVLYIVTYFVREIMES HHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH KCMGDRMGIAPFTMLAVIYIGILVYGVVGFILGPISYCIIKALVLYLKSILEHDKL HHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure GENVWDFRKRLTLLFGSAVIIAVVFFIFKVLFYYVWPFMLAFCFAVLLQKPIVGLAKLL CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH REKKTLAASIVVTMVTLIILSVLLYVGYMAFRELKDFIANFDENINSLDGQFKLVCCRID HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHCCCCCEEEEEEECC GWIKLKEGCSYAFFEKCKGIIIDGDGQQMFFTIMRKHSVPVITWCVMAVAGLVVCFIGTI CCEEECCCCCHHHHHHCCCEEEECCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHH YAAAGIEKYRSWRENTIFKGEVGAVHVGLRNLINVYFRVQLIIMSINIVVCSTAFLMIGN HHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC PYAILLGVLTGIIDALPIFGTGTVLIPWAVGSLLFGHVKNAVILVVLYIVTYFVREIMES HHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH KCMGDRMGIAPFTMLAVIYIGILVYGVVGFILGPISYCIIKALVLYLKSILEHDKL HHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 7678007 [H]