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The map label for this gene is nudF [H]

Identifier: 238916033

GI number: 238916033

Start: 70586

End: 71278

Strand: Direct

Name: nudF [H]

Synonym: EUBELI_00066

Alternate gene names: 238916033

Gene position: 70586-71278 (Clockwise)

Preceding gene: 238916032

Following gene: 238916034

Centisome position: 3.29

GC content: 40.69

Gene sequence:

>693_bases
ATGAAATATTTAAGTGAAGAGCAGAATAAATGTTTTGTGGGAACGGGAGAACTTAATAAAGCTGGTGATAGTCTGGCTGT
TTTCCTTGACAAATACGACCCTGATAAATATCAGAATCCATGCAACACTGTGGATACGCTTGTATTTACAAAGGAAGATT
CACAGGTTAAGAGAATTCTTCTTATAAAAAGAGGAAATCATCCATGTATTGGATTGTGGGCGTGTCCGGGAGGCTTTGTT
GAGTTTAAAGAGAATCTATATGATGCGGCTTTAAGAGAGCTTCAGGAGGAAACTGGTCTGCATGATATTGAAGCAGAACA
GCTTAAATCATATGGCGATTATGACCGTGACCCAAGAACAAGGATTATTACAACAGCATTTGTTGCATTGATAGATGAAG
GCAGCCAGAAGGCTCAGGCTGGTGATGATGCAAGAGAGGCCGGATGGTTTGATATATCAGATGAACTGGTTAATAAGACA
GAGGATAAGTCACTTATTAAGGAAGAATGGCTGTGCAGGCTGTCCAATGCTGATAAGAATATTAATATCTGTGCAAGGGT
GGAAGTTACCTATAGAAAAGGTATTCTTAAGAACCGCACATATAAGGTTGTTGACGGCGATGGGCTGGCAGCAGACCATG
CGGCTATTATACTGGAAGGATACCATCATGTTAAGGAGGCATTTAACGCATGA

Upstream 100 bases:

>100_bases
GCAGCTTTAATGAGGTGCTGGATGATTTCATACACAGGAAGTTCTGTGGAGCAAAGGATACAAGAATTAAATGGTTTGGT
GCAGGTAAGGGAGAGAAACG

Downstream 100 bases:

>100_bases
GTGAGAAGATAAAGAAGAACGAGAAAGCTAAGAAGCAGACATGGAGAGCCGGCAATATGCTATATCCTGTGCCTGCTGTT
ATGGTAAGCTGTGCAAGAAA

Product: hypothetical protein

Products: NA

Alternate protein names: ADP-ribose diphosphatase; ADP-ribose phosphohydrolase; Adenosine diphosphoribose pyrophosphatase; ADPR-PPase [H]

Number of amino acids: Translated: 230; Mature: 230

Protein sequence:

>230_residues
MKYLSEEQNKCFVGTGELNKAGDSLAVFLDKYDPDKYQNPCNTVDTLVFTKEDSQVKRILLIKRGNHPCIGLWACPGGFV
EFKENLYDAALRELQEETGLHDIEAEQLKSYGDYDRDPRTRIITTAFVALIDEGSQKAQAGDDAREAGWFDISDELVNKT
EDKSLIKEEWLCRLSNADKNINICARVEVTYRKGILKNRTYKVVDGDGLAADHAAIILEGYHHVKEAFNA

Sequences:

>Translated_230_residues
MKYLSEEQNKCFVGTGELNKAGDSLAVFLDKYDPDKYQNPCNTVDTLVFTKEDSQVKRILLIKRGNHPCIGLWACPGGFV
EFKENLYDAALRELQEETGLHDIEAEQLKSYGDYDRDPRTRIITTAFVALIDEGSQKAQAGDDAREAGWFDISDELVNKT
EDKSLIKEEWLCRLSNADKNINICARVEVTYRKGILKNRTYKVVDGDGLAADHAAIILEGYHHVKEAFNA
>Mature_230_residues
MKYLSEEQNKCFVGTGELNKAGDSLAVFLDKYDPDKYQNPCNTVDTLVFTKEDSQVKRILLIKRGNHPCIGLWACPGGFV
EFKENLYDAALRELQEETGLHDIEAEQLKSYGDYDRDPRTRIITTAFVALIDEGSQKAQAGDDAREAGWFDISDELVNKT
EDKSLIKEEWLCRLSNADKNINICARVEVTYRKGILKNRTYKVVDGDGLAADHAAIILEGYHHVKEAFNA

Specific function: Unknown

COG id: COG1051

COG function: function code F; ADP-ribose pyrophosphatase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 nudix hydrolase domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR020476
- InterPro:   IPR020084
- InterPro:   IPR000086
- InterPro:   IPR015797 [H]

Pfam domain/function: PF00293 NUDIX [H]

EC number: =3.6.1.13 [H]

Molecular weight: Translated: 25955; Mature: 25955

Theoretical pI: Translated: 4.77; Mature: 4.77

Prosite motif: PS00893 NUDIX

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.6 %Cys     (Translated Protein)
0.4 %Met     (Translated Protein)
3.0 %Cys+Met (Translated Protein)
2.6 %Cys     (Mature Protein)
0.4 %Met     (Mature Protein)
3.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKYLSEEQNKCFVGTGELNKAGDSLAVFLDKYDPDKYQNPCNTVDTLVFTKEDSQVKRIL
CCCCCCCCCEEEEECCCCCCCCCEEEEEEECCCCHHHCCCCCHHHEEEEECCCHHEEEEE
LIKRGNHPCIGLWACPGGFVEFKENLYDAALRELQEETGLHDIEAEQLKSYGDYDRDPRT
EEECCCCCEEEEEECCCCHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHCCCCCCCCCH
RIITTAFVALIDEGSQKAQAGDDAREAGWFDISDELVNKTEDKSLIKEEWLCRLSNADKN
HHHHHHHHHHHHCCCCCCCCCCCHHHCCCCCCCHHHHCCCHHHHHHHHHHHHHHCCCCCC
INICARVEVTYRKGILKNRTYKVVDGDGLAADHAAIILEGYHHVKEAFNA
CEEEEEEEEHHHHCHHCCCCEEEECCCCCCCCCHHEEEHHHHHHHHHHCC
>Mature Secondary Structure
MKYLSEEQNKCFVGTGELNKAGDSLAVFLDKYDPDKYQNPCNTVDTLVFTKEDSQVKRIL
CCCCCCCCCEEEEECCCCCCCCCEEEEEEECCCCHHHCCCCCHHHEEEEECCCHHEEEEE
LIKRGNHPCIGLWACPGGFVEFKENLYDAALRELQEETGLHDIEAEQLKSYGDYDRDPRT
EEECCCCCEEEEEECCCCHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHCCCCCCCCCH
RIITTAFVALIDEGSQKAQAGDDAREAGWFDISDELVNKTEDKSLIKEEWLCRLSNADKN
HHHHHHHHHHHHCCCCCCCCCCCHHHCCCCCCCHHHHCCCHHHHHHHHHHHHHHCCCCCC
INICARVEVTYRKGILKNRTYKVVDGDGLAADHAAIILEGYHHVKEAFNA
CEEEEEEEEHHHHCHHCCCCEEEECCCCCCCCCHHEEEHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8688087; 9694840 [H]