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The map label for this gene is gidB [H]

Identifier: 238897247

GI number: 238897247

Start: 5245790

End: 5246413

Strand: Reverse

Name: gidB [H]

Synonym: KP1_5523

Alternate gene names: 238897247

Gene position: 5246413-5245790 (Counterclockwise)

Preceding gene: 238897248

Following gene: 238897246

Centisome position: 99.96

GC content: 55.61

Gene sequence:

>624_bases
GTGCTCAACAAACTTTCTCGTCTGCTGGATGAAGCGGGTATTTCGCTCACCGATCACCAGAAAAATCAGCTGGTGGCTTA
CGTCGGACTGCTCGATAAGTGGAACAAAGCCTATAACCTGACCTCCGTTCGCGATCCGAATGAGATGCTGGTGCGTCATA
TTCTCGACAGCATCATCGTGGCGCCTTATCTGCAGGGCTCGCGCTTTATCGATGTTGGTACGGGCCCGGGGTTGCCGGGG
ATCCCGTTGGCCATCGTATGTCCGGAGTCACATTTCACCCTGCTGGACAGCCTTGGCAAGCGCGTGCGCTTCCTGCGTCA
GGTGCAGCACGAGCTGAAGCTGGATAACGTCACCCCGGTGCAGAGCCGCGTGGAAGCCTTCCCGGCCGAGCCGCCGTTTG
ATGGCGTGATAAGCCGCGCTTTCGCATCGCTTAATGATATGGTGAGCTGGTGCCATCATCTGCCGGCAGCGAATGGTCAC
TTCTATGCGCTCAAAGGGTTAGCGCAAAAAGAAGAAATGGAAAGTCTGCCGGAAGGGTATGACATTGTCGAGGTGATTGA
GCTGCATGTTCCTCGGTTGGAAGGGGAGCGGCACCTGGTGGTGATTAAGCCAAAATCGAGTTAA

Upstream 100 bases:

>100_bases
GCGCTGATTTCCCAGTTGCATAATCAGCGTTCGCCTTTATCATTCATAGCCCGGTAAGCGTTAGCGCCTCCGGGCTCATT
ATTTTTTGAAGGTACTTACC

Downstream 100 bases:

>100_bases
TTTTTATCAAAAAATGTGGAAAAAATGTGGCCCGCGCATGTTACAAAAATAAAGGACGTCCCCCGATATTAACGGGCTGC
ATTTAACCTTGTTTTTACTA

Product: 16S rRNA methyltransferase GidB

Products: NA

Alternate protein names: 16S rRNA 7-methylguanosine methyltransferase; 16S rRNA m7G methyltransferase [H]

Number of amino acids: Translated: 207; Mature: 207

Protein sequence:

>207_residues
MLNKLSRLLDEAGISLTDHQKNQLVAYVGLLDKWNKAYNLTSVRDPNEMLVRHILDSIIVAPYLQGSRFIDVGTGPGLPG
IPLAIVCPESHFTLLDSLGKRVRFLRQVQHELKLDNVTPVQSRVEAFPAEPPFDGVISRAFASLNDMVSWCHHLPAANGH
FYALKGLAQKEEMESLPEGYDIVEVIELHVPRLEGERHLVVIKPKSS

Sequences:

>Translated_207_residues
MLNKLSRLLDEAGISLTDHQKNQLVAYVGLLDKWNKAYNLTSVRDPNEMLVRHILDSIIVAPYLQGSRFIDVGTGPGLPG
IPLAIVCPESHFTLLDSLGKRVRFLRQVQHELKLDNVTPVQSRVEAFPAEPPFDGVISRAFASLNDMVSWCHHLPAANGH
FYALKGLAQKEEMESLPEGYDIVEVIELHVPRLEGERHLVVIKPKSS
>Mature_207_residues
MLNKLSRLLDEAGISLTDHQKNQLVAYVGLLDKWNKAYNLTSVRDPNEMLVRHILDSIIVAPYLQGSRFIDVGTGPGLPG
IPLAIVCPESHFTLLDSLGKRVRFLRQVQHELKLDNVTPVQSRVEAFPAEPPFDGVISRAFASLNDMVSWCHHLPAANGH
FYALKGLAQKEEMESLPEGYDIVEVIELHVPRLEGERHLVVIKPKSS

Specific function: Specifically methylates the N7 position of guanosine in position 527 of 16S rRNA [H]

COG id: COG0357

COG function: function code M; Predicted S-adenosylmethionine-dependent methyltransferase involved in bacterial cell division

Gene ontology:

Cell location: Cytoplasm (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the methyltransferase superfamily. RNA methyltransferase rsmG family [H]

Homologues:

Organism=Escherichia coli, GI1790179, Length=203, Percent_Identity=80.7881773399015, Blast_Score=343, Evalue=6e-96,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003682 [H]

Pfam domain/function: PF02527 GidB [H]

EC number: =2.1.1.170 [H]

Molecular weight: Translated: 23132; Mature: 23132

Theoretical pI: Translated: 6.60; Mature: 6.60

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
2.9 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
2.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLNKLSRLLDEAGISLTDHQKNQLVAYVGLLDKWNKAYNLTSVRDPNEMLVRHILDSIIV
CHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHH
APYLQGSRFIDVGTGPGLPGIPLAIVCPESHFTLLDSLGKRVRFLRQVQHELKLDNVTPV
HHHCCCCEEEECCCCCCCCCCCEEEECCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCHH
QSRVEAFPAEPPFDGVISRAFASLNDMVSWCHHLPAANGHFYALKGLAQKEEMESLPEGY
HHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEHHHHHHHHHHHHCCCCC
DIVEVIELHVPRLEGERHLVVIKPKSS
HHHHHHHHHCCCCCCCCEEEEEECCCC
>Mature Secondary Structure
MLNKLSRLLDEAGISLTDHQKNQLVAYVGLLDKWNKAYNLTSVRDPNEMLVRHILDSIIV
CHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHH
APYLQGSRFIDVGTGPGLPGIPLAIVCPESHFTLLDSLGKRVRFLRQVQHELKLDNVTPV
HHHCCCCEEEECCCCCCCCCCCEEEECCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCHH
QSRVEAFPAEPPFDGVISRAFASLNDMVSWCHHLPAANGHFYALKGLAQKEEMESLPEGY
HHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEHHHHHHHHHHHHCCCCC
DIVEVIELHVPRLEGERHLVVIKPKSS
HHHHHHHHHCCCCCCCCEEEEEECCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA