Click here to switch to the map view.

The map label for this gene is atpH [H]

Identifier: 238897242

GI number: 238897242

Start: 5242612

End: 5243145

Strand: Reverse

Name: atpH [H]

Synonym: KP1_5518

Alternate gene names: 238897242

Gene position: 5243145-5242612 (Counterclockwise)

Preceding gene: 238897243

Following gene: 238897241

Centisome position: 99.9

GC content: 51.5

Gene sequence:

>534_bases
ATGTCTGAATTTGTAACGGTAGCTCGCCCCTACGCCAAAGCAGCTTTTGACTTTGCCGTCGAACACAACAGTGTTGAACG
CTGGCAGGATATGCTGGCGTTTGCCGCCGAAGTGACCAAAAACGACCAAATGGCAGAGCTTCTCTCCGGTGCTTTGGCGC
CGGAAACGCTCTCAGAAGCGTTTATCGCTATCTGCGGCGAGCAACTCGACGAAAATGGCCAGAACCTGATTAAGGTGATG
GCGGAAAATAATCGTCTGAAGGTGCTCCCGGACGTTCTTGAGCAATTCATTCACCTGCGCGCGGCCAGTGAGGCCATCGC
AGAGGTAGAAGTAATATCTGCCAACCAACTGAGTGATGAACAGCTTGCCAGGATCGTCAGCGCGATGGAAAAACGTCTGT
CACGCAAAGTTAAGCTGAATTGCAAAATCGATAAGTCTGTTATGGCAGGTATTATCATCCGTGCGGGTGATATGGTCATT
GATGGCAGCGTACGCGGCCGTCTTGAGCGCCTTGCAGACGTCTTGCAGTCTTAA

Upstream 100 bases:

>100_bases
TTGCTGGCGCCGAGAAGATCATCGAACGTTCCGTGGATGAAGCTGCTAACAGCGACATCGTGGATAAACTTGTCGCTGAA
CTGTAAGGAGGGAGGGGCTG

Downstream 100 bases:

>100_bases
GGGGACTGGAGCATGCAACTGAATTCCACCGAAATCAGCGAACTGATCAAGCAGCGCATTGCTCAGTTCAATGTTGTGAG
CGAAGCTCATAACGAAGGTA

Product: F0F1 ATP synthase subunit delta

Products: ADP; phosphate; H+

Alternate protein names: ATP synthase F(1) sector subunit delta; F-type ATPase subunit delta; F-ATPase subunit delta [H]

Number of amino acids: Translated: 177; Mature: 176

Protein sequence:

>177_residues
MSEFVTVARPYAKAAFDFAVEHNSVERWQDMLAFAAEVTKNDQMAELLSGALAPETLSEAFIAICGEQLDENGQNLIKVM
AENNRLKVLPDVLEQFIHLRAASEAIAEVEVISANQLSDEQLARIVSAMEKRLSRKVKLNCKIDKSVMAGIIIRAGDMVI
DGSVRGRLERLADVLQS

Sequences:

>Translated_177_residues
MSEFVTVARPYAKAAFDFAVEHNSVERWQDMLAFAAEVTKNDQMAELLSGALAPETLSEAFIAICGEQLDENGQNLIKVM
AENNRLKVLPDVLEQFIHLRAASEAIAEVEVISANQLSDEQLARIVSAMEKRLSRKVKLNCKIDKSVMAGIIIRAGDMVI
DGSVRGRLERLADVLQS
>Mature_176_residues
SEFVTVARPYAKAAFDFAVEHNSVERWQDMLAFAAEVTKNDQMAELLSGALAPETLSEAFIAICGEQLDENGQNLIKVMA
ENNRLKVLPDVLEQFIHLRAASEAIAEVEVISANQLSDEQLARIVSAMEKRLSRKVKLNCKIDKSVMAGIIIRAGDMVID
GSVRGRLERLADVLQS

Specific function: This protein is part of the stalk that links CF(0) to CF(1). It either transmits conformational changes from CF(0) to CF(1) or is implicated in proton conduction [H]

COG id: COG0712

COG function: function code C; F0F1-type ATP synthase, delta subunit (mitochondrial oligomycin sensitivity protein)

Gene ontology:

Cell location: Cell inner membrane; Peripheral membrane protein [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the ATPase delta chain family [H]

Homologues:

Organism=Escherichia coli, GI1790173, Length=177, Percent_Identity=88.135593220339, Blast_Score=323, Evalue=6e-90,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000711
- InterPro:   IPR020781 [H]

Pfam domain/function: PF00213 OSCP [H]

EC number: 3.6.3.14

Molecular weight: Translated: 19531; Mature: 19400

Theoretical pI: Translated: 4.68; Mature: 4.68

Prosite motif: PS00389 ATPASE_DELTA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
4.0 %Met     (Translated Protein)
5.1 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
3.4 %Met     (Mature Protein)
4.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSEFVTVARPYAKAAFDFAVEHNSVERWQDMLAFAAEVTKNDQMAELLSGALAPETLSEA
CCCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCHHHHHHHHCCCCHHHHHHH
FIAICGEQLDENGQNLIKVMAENNRLKVLPDVLEQFIHLRAASEAIAEVEVISANQLSDE
HHHHHHHHHCCCHHHHHHHHHCCCCEEECHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHH
QLARIVSAMEKRLSRKVKLNCKIDKSVMAGIIIRAGDMVIDGSVRGRLERLADVLQS
HHHHHHHHHHHHHHHHHHEECEECHHHHHHHHHCCCCEEECCHHHHHHHHHHHHHCC
>Mature Secondary Structure 
SEFVTVARPYAKAAFDFAVEHNSVERWQDMLAFAAEVTKNDQMAELLSGALAPETLSEA
CCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCHHHHHHHHCCCCHHHHHHH
FIAICGEQLDENGQNLIKVMAENNRLKVLPDVLEQFIHLRAASEAIAEVEVISANQLSDE
HHHHHHHHHCCCHHHHHHHHHCCCCEEECHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHH
QLARIVSAMEKRLSRKVKLNCKIDKSVMAGIIIRAGDMVIDGSVRGRLERLADVLQS
HHHHHHHHHHHHHHHHHHEECEECHHHHHHHHHCCCCEEECCHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: Borate; diphosphate; HCO3- [C]

Metal ions: Co2+; Fe2+; Mn2+; Zn2+ [C]

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: ATP; H2O; H+

Specific reaction: ATP + H2O + H+(in) = ADP + phosphate + H+(out)

General reaction: Phosphorous acid anhydride hydrolysis [C]

Inhibitor: Ca2+; CN-; Efrapeptin; Ethidiumbromide; Guanidines analogs; Oligomycin; Quercetin; Trialkyl tin derivatives; Venturicidin [C]

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: NA