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The map label for this gene is yidE [C]

Identifier: 238897195

GI number: 238897195

Start: 5193873

End: 5195534

Strand: Reverse

Name: yidE [C]

Synonym: KP1_5465

Alternate gene names: 238897195

Gene position: 5195534-5193873 (Counterclockwise)

Preceding gene: 238897196

Following gene: 238897193

Centisome position: 98.99

GC content: 60.53

Gene sequence:

>1662_bases
ATGAGTGAGATAGCATTGACGGTCAGCGTGCTGGCGCTGGTGGCGGTAGTGGGGTTGTGGATCGGCAATGTCAAAATCCG
CGGCGTCGGCTTTGGCATTGGCGGCGTCCTGTTTGGCGGGATTATTGTCGGCCACTTTGTCGATCAGGCAGGGGTCACCC
TCAGCAGCCCGATGCTGCATTTTATTCAGGAATTCGGCTTGATCCTGTTTGTCTACACCATCGGTATTCAGGTGGGGCCG
GGCTTTTTCGCCTCGCTGCGGGTCTCAGGCCTGCGGCTCAATCTGTTCGCTATCCTGATCGTTATCCTCGGCGGCCTGGT
GACCGCGGTGCTGCATAAGCTGTTCAATATTCCTCTCCCGGTGGTGCTCGGTATCTTCTCCGGTGCGGTGACCAACACGC
CGGCGCTGGGGGCCGGGCAGCAAATTCTGCGCGATCTCGGCGTACCGTTCGAGGTGGTCGATCAAATGGGGATGAGCTAC
GCGATGGCGTATCCGTTCGGCATCTGCGGCATTCTGCTGACCATGTGGCTGGTGCGTCTGTTCTTTCGCATCAATGTCGA
GAAAGAGGCCCAGCGGTTTGAGGAGAGCAGCGGTAACGGCCACGCCCATTTGCACACCATTAACGTGCGGGTGGAGAACC
CCAACCTCAACCAGATGGCGATTCAGGATGTGCCGATGCTCAATAGCGACAACATCGTCTGTTCGCGGCTGAAGCGTGGC
GAGCTGTTGATGGTGCCTGCGCCGGGCACCCTTATCCAGGCTGGCGACCTGCTGCACCTGGTGGGGCGACCTGAGGATTT
GCACAATGCGCAGCTGGTGATAGGCCAGGAGGTGGCGACCTCGCTGTCGACGCGCGGCACCGATCTGAAAGTGGAGCGGG
TGGTGGTCACTAACGAAAAAGTGCTGGGGAAGAAAATACGCGATCTGCACGTTAAACAGCGCTATGACGTAGTGATCTCC
CGGCTTAACCGGGCAGGCGTCGAGCTGGTAGCCAGCAGCAGCGCCAGCCTGCAGTTTGGTGACATCCTCAATCTGGTCGG
CCGTCCGGAGGCAATTGACGCCGTGGCCGCCGAACTGGGTAACGCTCAGCAGAAGCTGCAGCAGGTCCAGATGCTGCCGG
TGTTTATCGGCATCGGACTCGGGGTACTGCTGGGATCTATCCCGTTGTTTATTCCCGGCTTCCCTGCCGCATTGAAGCTG
GGACTGGCCGGTGGGCCGCTGATTATGGCGCTGATCCTTGGGCGTATCGGCAGTATCGGCAAGCTGTACTGGTTTATGCC
GCCGAGCGCCAACCTGGCGCTGCGCGAGCTGGGGATAGTGCTGTTTCTGGCGGTGGTCGGGCTAAAATCGGGGGGTGACT
TTGTCGCCACCCTGACCCAGGGCGATGGTCTGAGCTGGATCGCTTACGGCATTTTCATCACCGCCATCCCGCTGCTGACG
GTGGGCGTCCTCGCGCGCATGCTGGCGAAAATGAACTATCTGACGCTGTGCGGCATGCTGGCCGGCTCCATGACTGACCC
GCCGGCGCTGGCCTTCGCCAACAACCTGCACGCCACCAGCGGCGCAGCGGCGCTCTCTTACGCCACCGTCTATCCGCTGG
TGATGTTCCTGCGCATTATCACCCCGCAGCTACTCGCCGTGCTGTTCTGGGGGCTAAGCTAG

Upstream 100 bases:

>100_bases
GTATCTTACTCCATGATTATTGTGCGCCAGGCGGCATACAATCCACCTGGCAGCGGTCATAATCCCTGTAGTTAATGGTG
TTATTCACAGGGACGGTACC

Downstream 100 bases:

>100_bases
CGGGCTTTGCGCCTGGACGCGGCGCAGGTGATAGTCCACCTGATACTCGCTGGCGTTGCGGAACATGACCGAATAGTTAA
GAAACTCGCCGCTGTCGCTG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 553; Mature: 552

Protein sequence:

>553_residues
MSEIALTVSVLALVAVVGLWIGNVKIRGVGFGIGGVLFGGIIVGHFVDQAGVTLSSPMLHFIQEFGLILFVYTIGIQVGP
GFFASLRVSGLRLNLFAILIVILGGLVTAVLHKLFNIPLPVVLGIFSGAVTNTPALGAGQQILRDLGVPFEVVDQMGMSY
AMAYPFGICGILLTMWLVRLFFRINVEKEAQRFEESSGNGHAHLHTINVRVENPNLNQMAIQDVPMLNSDNIVCSRLKRG
ELLMVPAPGTLIQAGDLLHLVGRPEDLHNAQLVIGQEVATSLSTRGTDLKVERVVVTNEKVLGKKIRDLHVKQRYDVVIS
RLNRAGVELVASSSASLQFGDILNLVGRPEAIDAVAAELGNAQQKLQQVQMLPVFIGIGLGVLLGSIPLFIPGFPAALKL
GLAGGPLIMALILGRIGSIGKLYWFMPPSANLALRELGIVLFLAVVGLKSGGDFVATLTQGDGLSWIAYGIFITAIPLLT
VGVLARMLAKMNYLTLCGMLAGSMTDPPALAFANNLHATSGAAALSYATVYPLVMFLRIITPQLLAVLFWGLS

Sequences:

>Translated_553_residues
MSEIALTVSVLALVAVVGLWIGNVKIRGVGFGIGGVLFGGIIVGHFVDQAGVTLSSPMLHFIQEFGLILFVYTIGIQVGP
GFFASLRVSGLRLNLFAILIVILGGLVTAVLHKLFNIPLPVVLGIFSGAVTNTPALGAGQQILRDLGVPFEVVDQMGMSY
AMAYPFGICGILLTMWLVRLFFRINVEKEAQRFEESSGNGHAHLHTINVRVENPNLNQMAIQDVPMLNSDNIVCSRLKRG
ELLMVPAPGTLIQAGDLLHLVGRPEDLHNAQLVIGQEVATSLSTRGTDLKVERVVVTNEKVLGKKIRDLHVKQRYDVVIS
RLNRAGVELVASSSASLQFGDILNLVGRPEAIDAVAAELGNAQQKLQQVQMLPVFIGIGLGVLLGSIPLFIPGFPAALKL
GLAGGPLIMALILGRIGSIGKLYWFMPPSANLALRELGIVLFLAVVGLKSGGDFVATLTQGDGLSWIAYGIFITAIPLLT
VGVLARMLAKMNYLTLCGMLAGSMTDPPALAFANNLHATSGAAALSYATVYPLVMFLRIITPQLLAVLFWGLS
>Mature_552_residues
SEIALTVSVLALVAVVGLWIGNVKIRGVGFGIGGVLFGGIIVGHFVDQAGVTLSSPMLHFIQEFGLILFVYTIGIQVGPG
FFASLRVSGLRLNLFAILIVILGGLVTAVLHKLFNIPLPVVLGIFSGAVTNTPALGAGQQILRDLGVPFEVVDQMGMSYA
MAYPFGICGILLTMWLVRLFFRINVEKEAQRFEESSGNGHAHLHTINVRVENPNLNQMAIQDVPMLNSDNIVCSRLKRGE
LLMVPAPGTLIQAGDLLHLVGRPEDLHNAQLVIGQEVATSLSTRGTDLKVERVVVTNEKVLGKKIRDLHVKQRYDVVISR
LNRAGVELVASSSASLQFGDILNLVGRPEAIDAVAAELGNAQQKLQQVQMLPVFIGIGLGVLLGSIPLFIPGFPAALKLG
LAGGPLIMALILGRIGSIGKLYWFMPPSANLALRELGIVLFLAVVGLKSGGDFVATLTQGDGLSWIAYGIFITAIPLLTV
GVLARMLAKMNYLTLCGMLAGSMTDPPALAFANNLHATSGAAALSYATVYPLVMFLRIITPQLLAVLFWGLS

Specific function: Unknown

COG id: COG2985

COG function: function code R; Predicted permease

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 2 RCK C-terminal domains [H]

Homologues:

Organism=Escherichia coli, GI87082315, Length=552, Percent_Identity=85.3260869565217, Blast_Score=926, Evalue=0.0,
Organism=Escherichia coli, GI1787071, Length=561, Percent_Identity=22.8163992869875, Blast_Score=126, Evalue=3e-30,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006037
- InterPro:   IPR023018
- InterPro:   IPR006512 [H]

Pfam domain/function: PF06826 Asp-Al_Ex; PF02080 TrkA_C [H]

EC number: NA

Molecular weight: Translated: 58901; Mature: 58770

Theoretical pI: Translated: 9.04; Mature: 9.04

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
3.1 %Met     (Translated Protein)
3.6 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
2.9 %Met     (Mature Protein)
3.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSEIALTVSVLALVAVVGLWIGNVKIRGVGFGIGGVLFGGIIVGHFVDQAGVTLSSPMLH
CCCHHHHHHHHHHHHHHHHHHCCEEEEEEECCHHHHHHHHHHHHHHHHHCCCEECHHHHH
FIQEFGLILFVYTIGIQVGPGFFASLRVSGLRLNLFAILIVILGGLVTAVLHKLFNIPLP
HHHHHHHHHHHHHHHHCCCCCCEEHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCHH
VVLGIFSGAVTNTPALGAGQQILRDLGVPFEVVDQMGMSYAMAYPFGICGILLTMWLVRL
HHHHHHHCCCCCCCCCCCHHHHHHHCCCCHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHH
FFRINVEKEAQRFEESSGNGHAHLHTINVRVENPNLNQMAIQDVPMLNSDNIVCSRLKRG
HHHCCCHHHHHHHHHCCCCCCEEEEEEEEEEECCCCCCEECCCCCCCCCCCHHHHHCCCC
ELLMVPAPGTLIQAGDLLHLVGRPEDLHNAQLVIGQEVATSLSTRGTDLKVERVVVTNEK
CEEEECCCCCEECCCCEEEECCCCCCCCCCEEEEHHHHHHHHHCCCCCEEEEEEEEECHH
VLGKKIRDLHVKQRYDVVISRLNRAGVELVASSSASLQFGDILNLVGRPEAIDAVAAELG
HHHHHHHHHHHHHHHHHHHHHHHHHCCEEEECCCCCEEHHHHHHHCCCCHHHHHHHHHHC
NAQQKLQQVQMLPVFIGIGLGVLLGSIPLFIPGFPAALKLGLAGGPLIMALILGRIGSIG
CHHHHHHHHHHHHHHHHHHHHHHHCCCHHHCCCCHHHHHCCCCCCHHHHHHHHHCCCCCC
KLYWFMPPSANLALRELGIVLFLAVVGLKSGGDFVATLTQGDGLSWIAYGIFITAIPLLT
EEEEECCCCCCHHHHHHHHHHHHHHHHCCCCCCEEEEEECCCCCHHHHHHHHHHHHHHHH
VGVLARMLAKMNYLTLCGMLAGSMTDPPALAFANNLHATSGAAALSYATVYPLVMFLRII
HHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHH
TPQLLAVLFWGLS
HHHHHHHHHHCCC
>Mature Secondary Structure 
SEIALTVSVLALVAVVGLWIGNVKIRGVGFGIGGVLFGGIIVGHFVDQAGVTLSSPMLH
CCHHHHHHHHHHHHHHHHHHCCEEEEEEECCHHHHHHHHHHHHHHHHHCCCEECHHHHH
FIQEFGLILFVYTIGIQVGPGFFASLRVSGLRLNLFAILIVILGGLVTAVLHKLFNIPLP
HHHHHHHHHHHHHHHHCCCCCCEEHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCHH
VVLGIFSGAVTNTPALGAGQQILRDLGVPFEVVDQMGMSYAMAYPFGICGILLTMWLVRL
HHHHHHHCCCCCCCCCCCHHHHHHHCCCCHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHH
FFRINVEKEAQRFEESSGNGHAHLHTINVRVENPNLNQMAIQDVPMLNSDNIVCSRLKRG
HHHCCCHHHHHHHHHCCCCCCEEEEEEEEEEECCCCCCEECCCCCCCCCCCHHHHHCCCC
ELLMVPAPGTLIQAGDLLHLVGRPEDLHNAQLVIGQEVATSLSTRGTDLKVERVVVTNEK
CEEEECCCCCEECCCCEEEECCCCCCCCCCEEEEHHHHHHHHHCCCCCEEEEEEEEECHH
VLGKKIRDLHVKQRYDVVISRLNRAGVELVASSSASLQFGDILNLVGRPEAIDAVAAELG
HHHHHHHHHHHHHHHHHHHHHHHHHCCEEEECCCCCEEHHHHHHHCCCCHHHHHHHHHHC
NAQQKLQQVQMLPVFIGIGLGVLLGSIPLFIPGFPAALKLGLAGGPLIMALILGRIGSIG
CHHHHHHHHHHHHHHHHHHHHHHHCCCHHHCCCCHHHHHCCCCCCHHHHHHHHHCCCCCC
KLYWFMPPSANLALRELGIVLFLAVVGLKSGGDFVATLTQGDGLSWIAYGIFITAIPLLT
EEEEECCCCCCHHHHHHHHHHHHHHHHCCCCCCEEEEEECCCCCHHHHHHHHHHHHHHHH
VGVLARMLAKMNYLTLCGMLAGSMTDPPALAFANNLHATSGAAALSYATVYPLVMFLRII
HHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHH
TPQLLAVLFWGLS
HHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: NA