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The map label for this gene is yicI [H]

Identifier: 238897120

GI number: 238897120

Start: 5117914

End: 5120232

Strand: Reverse

Name: yicI [H]

Synonym: KP1_5378

Alternate gene names: 238897120

Gene position: 5120232-5117914 (Counterclockwise)

Preceding gene: 238897121

Following gene: 238897119

Centisome position: 97.56

GC content: 60.63

Gene sequence:

>2319_bases
ATGAAAATCAGTGATGGAAACTGGCTCATTCAACCAGGGCTCAACCTGATCCAACCCGTACAGGTTTACGAGGTGGAGCA
GCAGGGGAATGAAATGGTGGTCTATGCCGCGCCGCGCGATGTCCGCGAACGCGCCTGGCAGCTGGATACGCCATTGTTCA
CCCTGCGCTTTTTCTCGCCTCAGGAAGGGATAATCGGCGTGCGCATGGAGCACTTTCAGGGCGCGCTGGATAACGGTCCG
CACTATCCGCTGAACGTGCAGAAAGACGTCCATGTCGAAATAGAAAATACGGCCGGGTTCGCTGAGCTGAAAAGCGGCAG
CCTCAGCGTGCGGGTGACTAAAGGCGAATTCTGGGCGCTGGATTTTCTGCGCGACGGCGTGCGTATCACCGGTAGCCAGC
TAAAAAACAACGGCTACGTGCAGGATAGTAAGACCCAGCGCAACTACATGTTTGAGCGCCTCGACCTCGGCGTCGGCGAA
ACCGTCTACGGCCTCGGCGAGCGCTTTACCGCCCTGGTGCGCAACGGCCAGACGGTAGAAACCTGGAACGAGGACGGCGG
CACCAGCACCGAGCAATCCTACAAAAATATCCCGTTCTATCTGACCAACCGCGGCTACGGCGTGCTGGTCAACCATCCGC
AGCGCGTCTCCTTCGAGGTGGGCTCGGAGAAAGTCTCTAAAGTCCAGTTCAGCGTTGAAGGCGAATACCTCGAGTACTTC
GTCATCGACGGCCCGACACCGAAAGCGGTGCTTAACCGCTATACGCAGTTCACCGGCCGCCCGGCGCTGCCGCCGGCATG
GTCGTTTGGTCTGTGGCTGACGACCTCGTTCACCACCAACTATGACGAAGCGACGGTGAATAGCTTCATCGACGGTATGG
CTGAGCGCCATCTGCCGCTGCACGTCTTCCACTTCGACTGCTTCTGGATGAAGGCCTTCCAGTGGTGCGATTTTGAATGG
GATCCGCAGACCTTCCCGGACCCGGAAGGGATGATCAAGCGCCTGAAGGCGAAAGGGCTGAAGGTCTGCGTGTGGATCAA
CCCGTACATCGGTCAGCGCTCGCCGGTGTTCAAGGAGCTGAAAGAGAAGGGTTATCTGCTGAAGCGCCCGGACGGTTCGC
TGTGGCAGTGGGATAAGTGGCAGCCGGGGCTGGCGATTTATGACTTCACCAACCCGGAAGCCTGCCAGTGGTACGCCGAC
AAGTTAAAAGGTCTGGTAGCGATGGGGGTCGATTGCTTCAAGACCGACTTCGGCGAGCGTATCCCGACCGACGTCCAGTG
GTTTGACGGTTCCGATCCGCAGAAAATGCACAACCACTACGCCTTCATCTATAACGAGCTGGTGTGGAAGGTGCTGAAAG
AGACCGTCGGCGAGCAGGAGGCGGTGCTGTTCGCCCGCTCCGCCTCGGTGGGCGCGCAGCAGTTCCCGGTGCACTGGGGC
GGCGACTGCTACGCCAACTACGAATCGATGGCGGAAAGCCTGCGCGGCGGGCTGTCGATCGGCATGTCCGGCTTTGGTTT
CTGGAGTCACGATATCGGCGGTTTCGAAAACACCGCGCCGGCCCACGTCTACAAGCGCTGGTGCGCCTTCGGCCTGCTCT
CCAGCCACAGCCGGCTGCACGGCAGCAAATCCTATCGGGTGCCATGGGCCTACGATGACGAGTCCTGCGACGTGGTGCGC
CACTTCACGCAGCTGAAATGCCGCATGATGCCGTATCTCTATCGTCAGGCGGCGCTGGCCAACGAGTGCGGCACGCCGAT
GCTGCGCGCGATGATGCTCGAGTTTCCGGACGATCCGGCCTGCGACTATCTCGACCGCCAGTATATGCTGGGCGATTCGG
TCCTGGTGGCGCCGGTGTTCTCCGAGGCCGGCGAAGTGCAGTTTTATCTGCCGGAAGGGCACTGGACGCATCTGTGGCAT
AACGATGAATTGCCGGGTAGCCGCTGGCATAAGCAGCATCACGATGCACTGAGCCTGCCGGTCTACGTTCGCGACAACAC
CCTGCTGGCGCTGGGCAACAATGACCAGAAGCCGGATTACGCCTGGCATGAGGGCACCGCCTTCCAGCTGTTCCACCTTG
AGGATGGACGCGAGGCACGCTGTGACGTTCCGGCGGCAGACGGCTCGACGATCTTCACCCTGAAGGCCAGGCGCCAGGGC
AACGCCATCGCCGTGAGCGGCGAAGGCGAGGCCCGCGGCTGGACGTTATGTCTGCGCAATATCCCGCAGGTCGCGGGCGT
GCAGGGCGGTACGCAGACCGGTAGCGAATGGGGAGTGGTGGTGAGCGCCGAGGGCAATACGCTGACGATTACGTTGTAA

Upstream 100 bases:

>100_bases
AAAAATGATGGCCGAGCTGGCCGAGGGCGCGCGTCGCAACGAACAAGAATTCACCGCCGCCCCGATCGACAAAGAATGGC
AAAACTAAGAGGACGTTTTA

Downstream 100 bases:

>100_bases
ATAGGTTAACAGCAGCAGCCCTCTTCGCCCGGCGGAGAGGGTTTTTTTATTCCATTTTTGTACAAAAAGTAACGTTCATT
TCATTGTGGTGACTCAGGCC

Product: alpha-xylosidase YicI

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 772; Mature: 772

Protein sequence:

>772_residues
MKISDGNWLIQPGLNLIQPVQVYEVEQQGNEMVVYAAPRDVRERAWQLDTPLFTLRFFSPQEGIIGVRMEHFQGALDNGP
HYPLNVQKDVHVEIENTAGFAELKSGSLSVRVTKGEFWALDFLRDGVRITGSQLKNNGYVQDSKTQRNYMFERLDLGVGE
TVYGLGERFTALVRNGQTVETWNEDGGTSTEQSYKNIPFYLTNRGYGVLVNHPQRVSFEVGSEKVSKVQFSVEGEYLEYF
VIDGPTPKAVLNRYTQFTGRPALPPAWSFGLWLTTSFTTNYDEATVNSFIDGMAERHLPLHVFHFDCFWMKAFQWCDFEW
DPQTFPDPEGMIKRLKAKGLKVCVWINPYIGQRSPVFKELKEKGYLLKRPDGSLWQWDKWQPGLAIYDFTNPEACQWYAD
KLKGLVAMGVDCFKTDFGERIPTDVQWFDGSDPQKMHNHYAFIYNELVWKVLKETVGEQEAVLFARSASVGAQQFPVHWG
GDCYANYESMAESLRGGLSIGMSGFGFWSHDIGGFENTAPAHVYKRWCAFGLLSSHSRLHGSKSYRVPWAYDDESCDVVR
HFTQLKCRMMPYLYRQAALANECGTPMLRAMMLEFPDDPACDYLDRQYMLGDSVLVAPVFSEAGEVQFYLPEGHWTHLWH
NDELPGSRWHKQHHDALSLPVYVRDNTLLALGNNDQKPDYAWHEGTAFQLFHLEDGREARCDVPAADGSTIFTLKARRQG
NAIAVSGEGEARGWTLCLRNIPQVAGVQGGTQTGSEWGVVVSAEGNTLTITL

Sequences:

>Translated_772_residues
MKISDGNWLIQPGLNLIQPVQVYEVEQQGNEMVVYAAPRDVRERAWQLDTPLFTLRFFSPQEGIIGVRMEHFQGALDNGP
HYPLNVQKDVHVEIENTAGFAELKSGSLSVRVTKGEFWALDFLRDGVRITGSQLKNNGYVQDSKTQRNYMFERLDLGVGE
TVYGLGERFTALVRNGQTVETWNEDGGTSTEQSYKNIPFYLTNRGYGVLVNHPQRVSFEVGSEKVSKVQFSVEGEYLEYF
VIDGPTPKAVLNRYTQFTGRPALPPAWSFGLWLTTSFTTNYDEATVNSFIDGMAERHLPLHVFHFDCFWMKAFQWCDFEW
DPQTFPDPEGMIKRLKAKGLKVCVWINPYIGQRSPVFKELKEKGYLLKRPDGSLWQWDKWQPGLAIYDFTNPEACQWYAD
KLKGLVAMGVDCFKTDFGERIPTDVQWFDGSDPQKMHNHYAFIYNELVWKVLKETVGEQEAVLFARSASVGAQQFPVHWG
GDCYANYESMAESLRGGLSIGMSGFGFWSHDIGGFENTAPAHVYKRWCAFGLLSSHSRLHGSKSYRVPWAYDDESCDVVR
HFTQLKCRMMPYLYRQAALANECGTPMLRAMMLEFPDDPACDYLDRQYMLGDSVLVAPVFSEAGEVQFYLPEGHWTHLWH
NDELPGSRWHKQHHDALSLPVYVRDNTLLALGNNDQKPDYAWHEGTAFQLFHLEDGREARCDVPAADGSTIFTLKARRQG
NAIAVSGEGEARGWTLCLRNIPQVAGVQGGTQTGSEWGVVVSAEGNTLTITL
>Mature_772_residues
MKISDGNWLIQPGLNLIQPVQVYEVEQQGNEMVVYAAPRDVRERAWQLDTPLFTLRFFSPQEGIIGVRMEHFQGALDNGP
HYPLNVQKDVHVEIENTAGFAELKSGSLSVRVTKGEFWALDFLRDGVRITGSQLKNNGYVQDSKTQRNYMFERLDLGVGE
TVYGLGERFTALVRNGQTVETWNEDGGTSTEQSYKNIPFYLTNRGYGVLVNHPQRVSFEVGSEKVSKVQFSVEGEYLEYF
VIDGPTPKAVLNRYTQFTGRPALPPAWSFGLWLTTSFTTNYDEATVNSFIDGMAERHLPLHVFHFDCFWMKAFQWCDFEW
DPQTFPDPEGMIKRLKAKGLKVCVWINPYIGQRSPVFKELKEKGYLLKRPDGSLWQWDKWQPGLAIYDFTNPEACQWYAD
KLKGLVAMGVDCFKTDFGERIPTDVQWFDGSDPQKMHNHYAFIYNELVWKVLKETVGEQEAVLFARSASVGAQQFPVHWG
GDCYANYESMAESLRGGLSIGMSGFGFWSHDIGGFENTAPAHVYKRWCAFGLLSSHSRLHGSKSYRVPWAYDDESCDVVR
HFTQLKCRMMPYLYRQAALANECGTPMLRAMMLEFPDDPACDYLDRQYMLGDSVLVAPVFSEAGEVQFYLPEGHWTHLWH
NDELPGSRWHKQHHDALSLPVYVRDNTLLALGNNDQKPDYAWHEGTAFQLFHLEDGREARCDVPAADGSTIFTLKARRQG
NAIAVSGEGEARGWTLCLRNIPQVAGVQGGTQTGSEWGVVVSAEGNTLTITL

Specific function: Can catalyzes the transfer of alpha-xylosyl residue from alpha-xyloside to xylose, glucose, mannose, fructose, maltose, isomaltose, nigerose, kojibiose, sucrose and trehalose [H]

COG id: COG1501

COG function: function code G; Alpha-glucosidases, family 31 of glycosyl hydrolases

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the glycosyl hydrolase 31 family [H]

Homologues:

Organism=Homo sapiens, GI88900491, Length=430, Percent_Identity=29.5348837209302, Blast_Score=162, Evalue=1e-39,
Organism=Homo sapiens, GI38202257, Length=430, Percent_Identity=29.5348837209302, Blast_Score=162, Evalue=1e-39,
Organism=Homo sapiens, GI66346737, Length=438, Percent_Identity=26.7123287671233, Blast_Score=156, Evalue=9e-38,
Organism=Homo sapiens, GI119393895, Length=539, Percent_Identity=22.6345083487941, Blast_Score=139, Evalue=8e-33,
Organism=Homo sapiens, GI119393893, Length=539, Percent_Identity=22.6345083487941, Blast_Score=139, Evalue=8e-33,
Organism=Homo sapiens, GI119393891, Length=539, Percent_Identity=22.6345083487941, Blast_Score=139, Evalue=8e-33,
Organism=Homo sapiens, GI221316699, Length=639, Percent_Identity=23.4741784037559, Blast_Score=135, Evalue=1e-31,
Organism=Homo sapiens, GI157364974, Length=608, Percent_Identity=22.5328947368421, Blast_Score=115, Evalue=1e-25,
Organism=Homo sapiens, GI153791946, Length=402, Percent_Identity=25.8706467661692, Blast_Score=114, Evalue=5e-25,
Organism=Homo sapiens, GI310115361, Length=212, Percent_Identity=28.3018867924528, Blast_Score=90, Evalue=7e-18,
Organism=Escherichia coli, GI2367256, Length=772, Percent_Identity=87.5647668393782, Blast_Score=1442, Evalue=0.0,
Organism=Escherichia coli, GI2367323, Length=548, Percent_Identity=25, Blast_Score=180, Evalue=4e-46,
Organism=Caenorhabditis elegans, GI71991189, Length=429, Percent_Identity=28.4382284382284, Blast_Score=152, Evalue=8e-37,
Organism=Caenorhabditis elegans, GI17560800, Length=432, Percent_Identity=26.6203703703704, Blast_Score=150, Evalue=2e-36,
Organism=Caenorhabditis elegans, GI17560798, Length=432, Percent_Identity=26.6203703703704, Blast_Score=150, Evalue=3e-36,
Organism=Caenorhabditis elegans, GI32563849, Length=193, Percent_Identity=26.4248704663212, Blast_Score=72, Evalue=1e-12,
Organism=Caenorhabditis elegans, GI71985706, Length=242, Percent_Identity=23.9669421487603, Blast_Score=72, Evalue=1e-12,
Organism=Saccharomyces cerevisiae, GI6319706, Length=510, Percent_Identity=23.3333333333333, Blast_Score=115, Evalue=2e-26,
Organism=Drosophila melanogaster, GI24643749, Length=495, Percent_Identity=24.4444444444444, Blast_Score=135, Evalue=2e-31,
Organism=Drosophila melanogaster, GI24643753, Length=495, Percent_Identity=24.4444444444444, Blast_Score=135, Evalue=2e-31,
Organism=Drosophila melanogaster, GI24643751, Length=495, Percent_Identity=24.4444444444444, Blast_Score=135, Evalue=2e-31,
Organism=Drosophila melanogaster, GI24643746, Length=495, Percent_Identity=24.4444444444444, Blast_Score=135, Evalue=2e-31,
Organism=Drosophila melanogaster, GI21357605, Length=495, Percent_Identity=24.4444444444444, Blast_Score=135, Evalue=2e-31,
Organism=Drosophila melanogaster, GI24650054, Length=378, Percent_Identity=26.1904761904762, Blast_Score=110, Evalue=4e-24,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR013785
- InterPro:   IPR011013
- InterPro:   IPR000322
- InterPro:   IPR017853 [H]

Pfam domain/function: PF01055 Glyco_hydro_31 [H]

EC number: NA

Molecular weight: Translated: 87643; Mature: 87643

Theoretical pI: Translated: 5.58; Mature: 5.58

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.7 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
3.9 %Cys+Met (Translated Protein)
1.7 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
3.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKISDGNWLIQPGLNLIQPVQVYEVEQQGNEMVVYAAPRDVRERAWQLDTPLFTLRFFSP
CEECCCCEEECCCCCCCCCEEEEEEECCCCEEEEEECCHHHHHHHHCCCCCEEEEEEECC
QEGIIGVRMEHFQGALDNGPHYPLNVQKDVHVEIENTAGFAELKSGSLSVRVTKGEFWAL
CCCEEEEEHHHHCCCCCCCCCCCEECCCEEEEEEECCCCCEEECCCCEEEEEECCCEEEE
DFLRDGVRITGSQLKNNGYVQDSKTQRNYMFERLDLGVGETVYGLGERFTALVRNGQTVE
HHHHCCCEEECHHHCCCCCCCCCCHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCCEEE
TWNEDGGTSTEQSYKNIPFYLTNRGYGVLVNHPQRVSFEVGSEKVSKVQFSVEGEYLEYF
ECCCCCCCCCHHHHCCCCEEEECCCCEEEECCCCEEEEECCCCCEEEEEEEECCCEEEEE
VIDGPTPKAVLNRYTQFTGRPALPPAWSFGLWLTTSFTTNYDEATVNSFIDGMAERHLPL
EEECCCHHHHHHHHHHHCCCCCCCCCCCCCEEEEEEECCCCCHHHHHHHHHHHHHCCCCE
HVFHFDCFWMKAFQWCDFEWDPQTFPDPEGMIKRLKAKGLKVCVWINPYIGQRSPVFKEL
EEEEEHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHCCCCEEEEEECCCCCCCCHHHHHH
KEKGYLLKRPDGSLWQWDKWQPGLAIYDFTNPEACQWYADKLKGLVAMGVDCFKTDFGER
HHCCCEEECCCCCCCCCCCCCCCEEEEECCCCHHHHHHHHHHHHHHHHCHHHHHHHHHCC
IPTDVQWFDGSDPQKMHNHYAFIYNELVWKVLKETVGEQEAVLFARSASVGAQQFPVHWG
CCCCEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEECCCCCCCCCCEEEC
GDCYANYESMAESLRGGLSIGMSGFGFWSHDIGGFENTAPAHVYKRWCAFGLLSSHSRLH
CCCEECHHHHHHHHCCCEEECCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCHHHC
GSKSYRVPWAYDDESCDVVRHFTQLKCRMMPYLYRQAALANECGTPMLRAMMLEFPDDPA
CCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHCCCCCCC
CDYLDRQYMLGDSVLVAPVFSEAGEVQFYLPEGHWTHLWHNDELPGSRWHKQHHDALSLP
CHHHCCHHCCCCCEEEEEECCCCCCEEEECCCCCEEEEECCCCCCCHHHHHHCCCCEECE
VYVRDNTLLALGNNDQKPDYAWHEGTAFQLFHLEDGREARCDVPAADGSTIFTLKARRQG
EEEECCEEEEECCCCCCCCCCCCCCCEEEEEEECCCCCCCCCCCCCCCCEEEEEEECCCC
NAIAVSGEGEARGWTLCLRNIPQVAGVQGGTQTGSEWGVVVSAEGNTLTITL
CEEEEECCCCCCHHHHHHHCCCHHHCCCCCCCCCCCCCEEEEECCCEEEEEC
>Mature Secondary Structure
MKISDGNWLIQPGLNLIQPVQVYEVEQQGNEMVVYAAPRDVRERAWQLDTPLFTLRFFSP
CEECCCCEEECCCCCCCCCEEEEEEECCCCEEEEEECCHHHHHHHHCCCCCEEEEEEECC
QEGIIGVRMEHFQGALDNGPHYPLNVQKDVHVEIENTAGFAELKSGSLSVRVTKGEFWAL
CCCEEEEEHHHHCCCCCCCCCCCEECCCEEEEEEECCCCCEEECCCCEEEEEECCCEEEE
DFLRDGVRITGSQLKNNGYVQDSKTQRNYMFERLDLGVGETVYGLGERFTALVRNGQTVE
HHHHCCCEEECHHHCCCCCCCCCCHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCCEEE
TWNEDGGTSTEQSYKNIPFYLTNRGYGVLVNHPQRVSFEVGSEKVSKVQFSVEGEYLEYF
ECCCCCCCCCHHHHCCCCEEEECCCCEEEECCCCEEEEECCCCCEEEEEEEECCCEEEEE
VIDGPTPKAVLNRYTQFTGRPALPPAWSFGLWLTTSFTTNYDEATVNSFIDGMAERHLPL
EEECCCHHHHHHHHHHHCCCCCCCCCCCCCEEEEEEECCCCCHHHHHHHHHHHHHCCCCE
HVFHFDCFWMKAFQWCDFEWDPQTFPDPEGMIKRLKAKGLKVCVWINPYIGQRSPVFKEL
EEEEEHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHCCCCEEEEEECCCCCCCCHHHHHH
KEKGYLLKRPDGSLWQWDKWQPGLAIYDFTNPEACQWYADKLKGLVAMGVDCFKTDFGER
HHCCCEEECCCCCCCCCCCCCCCEEEEECCCCHHHHHHHHHHHHHHHHCHHHHHHHHHCC
IPTDVQWFDGSDPQKMHNHYAFIYNELVWKVLKETVGEQEAVLFARSASVGAQQFPVHWG
CCCCEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEECCCCCCCCCCEEEC
GDCYANYESMAESLRGGLSIGMSGFGFWSHDIGGFENTAPAHVYKRWCAFGLLSSHSRLH
CCCEECHHHHHHHHCCCEEECCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCHHHC
GSKSYRVPWAYDDESCDVVRHFTQLKCRMMPYLYRQAALANECGTPMLRAMMLEFPDDPA
CCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHCCCCCCC
CDYLDRQYMLGDSVLVAPVFSEAGEVQFYLPEGHWTHLWHNDELPGSRWHKQHHDALSLP
CHHHCCHHCCCCCEEEEEECCCCCCEEEECCCCCEEEEECCCCCCCHHHHHHCCCCEECE
VYVRDNTLLALGNNDQKPDYAWHEGTAFQLFHLEDGREARCDVPAADGSTIFTLKARRQG
EEEECCEEEEECCCCCCCCCCCCCCCEEEEEEECCCCCCCCCCCCCCCCEEEEEEECCCC
NAIAVSGEGEARGWTLCLRNIPQVAGVQGGTQTGSEWGVVVSAEGNTLTITL
CEEEEECCCCCCHHHHHHHCCCHHHCCCCCCCCCCCCCEEEEECCCEEEEEC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 7686882; 9278503 [H]