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The map label for this gene is yiiR [H]

Identifier: 238897105

GI number: 238897105

Start: 5100171

End: 5100599

Strand: Reverse

Name: yiiR [H]

Synonym: KP1_5360

Alternate gene names: 238897105

Gene position: 5100599-5100171 (Counterclockwise)

Preceding gene: 238897108

Following gene: 238897097

Centisome position: 97.18

GC content: 61.31

Gene sequence:

>429_bases
ATGACCCTACAGCAGTGGTTATTCTCAATTAAAGGGCGCATTGGCCGCCGCGATTTCTGGATCTGGATTGCCATCTGGCT
GGTGACCATGAGCGCCCTGTTTACCCTGGCAGGCAGCAATCTGCTCAACCTGCAGACGGCGGCGTTTATTATCGTCTGCC
TGCTGTGGCCGACGGCGGCGGTGGTGGTCAAGCGGCTGCACGATCGCGGCAAATCCGGGCTGTGGGCGCTGCTGATGGTT
CTGGCGTGGATGCTGCTGGCGGGGAACTGGTCGATGTTGCCGCAGGTCTGGCAGTGGGGCGTCGGGCGCTTTGTGCCGAC
GCTGATTATCGTCATGATGCTGATCGACCTGGGGGCGTTTGTCGGCACCCAGGGCGAGAATAAGTTCGGCAAGGAGACCC
AGGACGTGCGCTGGAAAGCGGACGCCTGA

Upstream 100 bases:

>100_bases
TTTTTTTGCCTGCTGACGATTAAATCGGGAAGCGCGGCGCTTGTCAAAAAGTCACGACGCCAGGGTAAACTACGCAGACG
ATGATGATAAGGAAAAACGC

Downstream 100 bases:

>100_bases
TTACCAGTAGTGCTCCGCCGTCATATGGCCCGGCCGGCGACGCAGATGTTTGGTCATCTGCCGGGTCTCTTTTAACAGCT
GTTGGGTATCGCGCACCATT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 142; Mature: 141

Protein sequence:

>142_residues
MTLQQWLFSIKGRIGRRDFWIWIAIWLVTMSALFTLAGSNLLNLQTAAFIIVCLLWPTAAVVVKRLHDRGKSGLWALLMV
LAWMLLAGNWSMLPQVWQWGVGRFVPTLIIVMMLIDLGAFVGTQGENKFGKETQDVRWKADA

Sequences:

>Translated_142_residues
MTLQQWLFSIKGRIGRRDFWIWIAIWLVTMSALFTLAGSNLLNLQTAAFIIVCLLWPTAAVVVKRLHDRGKSGLWALLMV
LAWMLLAGNWSMLPQVWQWGVGRFVPTLIIVMMLIDLGAFVGTQGENKFGKETQDVRWKADA
>Mature_141_residues
TLQQWLFSIKGRIGRRDFWIWIAIWLVTMSALFTLAGSNLLNLQTAAFIIVCLLWPTAAVVVKRLHDRGKSGLWALLMVL
AWMLLAGNWSMLPQVWQWGVGRFVPTLIIVMMLIDLGAFVGTQGENKFGKETQDVRWKADA

Specific function: Unknown

COG id: COG3152

COG function: function code S; Predicted membrane protein

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI1790355, Length=141, Percent_Identity=78.7234042553192, Blast_Score=236, Evalue=6e-64,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR008523 [H]

Pfam domain/function: PF05656 DUF805 [H]

EC number: NA

Molecular weight: Translated: 16147; Mature: 16015

Theoretical pI: Translated: 11.03; Mature: 11.03

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
4.9 %Met     (Translated Protein)
5.6 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
4.3 %Met     (Mature Protein)
5.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTLQQWLFSIKGRIGRRDFWIWIAIWLVTMSALFTLAGSNLLNLQTAAFIIVCLLWPTAA
CCHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHH
VVVKRLHDRGKSGLWALLMVLAWMLLAGNWSMLPQVWQWGVGRFVPTLIIVMMLIDLGAF
HHHHHHHHCCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
VGTQGENKFGKETQDVRWKADA
HCCCCCCCCCCCCCCCCCCCCC
>Mature Secondary Structure 
TLQQWLFSIKGRIGRRDFWIWIAIWLVTMSALFTLAGSNLLNLQTAAFIIVCLLWPTAA
CHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHH
VVVKRLHDRGKSGLWALLMVLAWMLLAGNWSMLPQVWQWGVGRFVPTLIIVMMLIDLGAF
HHHHHHHHCCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
VGTQGENKFGKETQDVRWKADA
HCCCCCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]