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The map label for this gene is yicC [H]

Identifier: 238897092

GI number: 238897092

Start: 5085348

End: 5086211

Strand: Direct

Name: yicC [H]

Synonym: KP1_5345

Alternate gene names: 238897092

Gene position: 5085348-5086211 (Clockwise)

Preceding gene: 238897084

Following gene: 238897093

Centisome position: 96.89

GC content: 57.06

Gene sequence:

>864_bases
ATGATCCGCAGTATGACCGCCTATGCCCGCCGTGAAATCAAGGGTGACTGGGGTAGCGCCGCATGGGAGCTGCGCTCGGT
AAACCAGCGCTATCTGGAAACGTACTTCCGCCTGCCGGAGCAGTTCCGTAGTCTGGAGCCCGTGGTACGCGAGCGCATTC
GCGCCCGCCTGACTCGCGGTAAAGTCGAATGCACCTTGCGTTTTGAACAAGATCCCAGCGCTCAGGGTGAACTCATCCTC
AACGAAAAGCTGGCTAAACAGCTGGTAAACGCTGCCAACTGGGTGAAAATGCAGAGCGATGAAGGGGAAATCAACCCGGT
TGATATCCTGCGCTGGCCGGGCGTGATGGCCGCCAAAGAGCAGGATCTCGACGCCATCGCCGCCGACATTCTGGCCGCTC
TTGACGGCGCGCTGGACGACTTCATCGTCGCCCGCGAAACGGAAGGCCAGGCCCTGAAAGCGCTTATCGAGCAGCGGCTT
GAAGGCGTGAGCGGCGAAGTGGCGAAAGTTCGCGCTCATATGCCGGAAATTCTCCAGTGGCAGCGCGAGCGCCTGGTCGC
CAAGCTGGAAGATGCGGAAGTACAGCTGGAAAATAACCGCCTTGAGCAAGAGCTGGTGCTGATGGCGCAGCGTATCGACG
TTGCCGAAGAACTGGACCGTCTCGAAGCGCACGTTAAAGAGACCTATAACATTCTGAAGAAGAAAGAAGCTGTGGGTCGC
CGTCTCGACTTTATGATGCAGGAGTTCAACCGTGAATCGAACACCCTGGCGTCAAAATCGATTAACGCCGAGGTGACCAA
CTCCGCGATTGAGCTGAAGGTACTCATCGAGCAAATGCGCGAGCAAATCCAGAATATCGAGTAA

Upstream 100 bases:

>100_bases
TAAAACAATCGTCCTTGAAGTATTTCATCACTATTCCTGTTAAGTCACCGCCCGCACGGCTATAATCCTTGCATTCATTA
TTACGAAAACAGGAACGCCT

Downstream 100 bases:

>100_bases
CGCTTTCTCGTTTGTTAATGTATTTCGGTATCCAGGGCCATGATAAATCATGGCCTTTTTATTTATCTCTCTCACGGGCG
AATGATAAGAATCTACTTAT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 287; Mature: 287

Protein sequence:

>287_residues
MIRSMTAYARREIKGDWGSAAWELRSVNQRYLETYFRLPEQFRSLEPVVRERIRARLTRGKVECTLRFEQDPSAQGELIL
NEKLAKQLVNAANWVKMQSDEGEINPVDILRWPGVMAAKEQDLDAIAADILAALDGALDDFIVARETEGQALKALIEQRL
EGVSGEVAKVRAHMPEILQWQRERLVAKLEDAEVQLENNRLEQELVLMAQRIDVAEELDRLEAHVKETYNILKKKEAVGR
RLDFMMQEFNRESNTLASKSINAEVTNSAIELKVLIEQMREQIQNIE

Sequences:

>Translated_287_residues
MIRSMTAYARREIKGDWGSAAWELRSVNQRYLETYFRLPEQFRSLEPVVRERIRARLTRGKVECTLRFEQDPSAQGELIL
NEKLAKQLVNAANWVKMQSDEGEINPVDILRWPGVMAAKEQDLDAIAADILAALDGALDDFIVARETEGQALKALIEQRL
EGVSGEVAKVRAHMPEILQWQRERLVAKLEDAEVQLENNRLEQELVLMAQRIDVAEELDRLEAHVKETYNILKKKEAVGR
RLDFMMQEFNRESNTLASKSINAEVTNSAIELKVLIEQMREQIQNIE
>Mature_287_residues
MIRSMTAYARREIKGDWGSAAWELRSVNQRYLETYFRLPEQFRSLEPVVRERIRARLTRGKVECTLRFEQDPSAQGELIL
NEKLAKQLVNAANWVKMQSDEGEINPVDILRWPGVMAAKEQDLDAIAADILAALDGALDDFIVARETEGQALKALIEQRL
EGVSGEVAKVRAHMPEILQWQRERLVAKLEDAEVQLENNRLEQELVLMAQRIDVAEELDRLEAHVKETYNILKKKEAVGR
RLDFMMQEFNRESNTLASKSINAEVTNSAIELKVLIEQMREQIQNIE

Specific function: Unknown

COG id: COG1561

COG function: function code S; Uncharacterized stress-induced protein

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0701 family [H]

Homologues:

Organism=Escherichia coli, GI1790075, Length=287, Percent_Identity=94.0766550522648, Blast_Score=527, Evalue=1e-151,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005229
- InterPro:   IPR013551
- InterPro:   IPR013527 [H]

Pfam domain/function: PF08340 DUF1732; PF03755 YicC_N [H]

EC number: NA

Molecular weight: Translated: 33026; Mature: 33026

Theoretical pI: Translated: 4.78; Mature: 4.78

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
3.1 %Met     (Translated Protein)
3.5 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
3.1 %Met     (Mature Protein)
3.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIRSMTAYARREIKGDWGSAAWELRSVNQRYLETYFRLPEQFRSLEPVVRERIRARLTRG
CCCCHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHCC
KVECTLRFEQDPSAQGELILNEKLAKQLVNAANWVKMQSDEGEINPVDILRWPGVMAAKE
CEEEEEEECCCCCCCCCEEHHHHHHHHHHHHHHHEEEECCCCCCCCHHHEECCCCHHCCH
QDLDAIAADILAALDGALDDFIVARETEGQALKALIEQRLEGVSGEVAKVRAHMPEILQW
HHHHHHHHHHHHHHHHHHHHHHHEECCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHH
QRERLVAKLEDAEVQLENNRLEQELVLMAQRIDVAEELDRLEAHVKETYNILKKKEAVGR
HHHHHHHHHHHHHHEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
RLDFMMQEFNRESNTLASKSINAEVTNSAIELKVLIEQMREQIQNIE
HHHHHHHHHCCHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MIRSMTAYARREIKGDWGSAAWELRSVNQRYLETYFRLPEQFRSLEPVVRERIRARLTRG
CCCCHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHCC
KVECTLRFEQDPSAQGELILNEKLAKQLVNAANWVKMQSDEGEINPVDILRWPGVMAAKE
CEEEEEEECCCCCCCCCEEHHHHHHHHHHHHHHHEEEECCCCCCCCHHHEECCCCHHCCH
QDLDAIAADILAALDGALDDFIVARETEGQALKALIEQRLEGVSGEVAKVRAHMPEILQW
HHHHHHHHHHHHHHHHHHHHHHHEECCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHH
QRERLVAKLEDAEVQLENNRLEQELVLMAQRIDVAEELDRLEAHVKETYNILKKKEAVGR
HHHHHHHHHHHHHHEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
RLDFMMQEFNRESNTLASKSINAEVTNSAIELKVLIEQMREQIQNIE
HHHHHHHHHCCHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 2664418; 7686882; 9278503; 1925027 [H]