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The map label for this gene is waaF [H]

Identifier: 238897063

GI number: 238897063

Start: 5059041

End: 5060099

Strand: Direct

Name: waaF [H]

Synonym: KP1_5314

Alternate gene names: 238897063

Gene position: 5059041-5060099 (Clockwise)

Preceding gene: 238897062

Following gene: 238897064

Centisome position: 96.39

GC content: 61.19

Gene sequence:

>1059_bases
ATGAAAATATTGGTGGTAGGCCCGTCTTGGGTGGGCGACATGATGATGTCGCAAAGTCTTTATCGTACGCTCAGGGCGCG
CTATCCCCAGGCGATTATCGACGTGATGGCGCCAGCCTGGTGCCGTCCGTTGCTTTCGCGCATGCCGGAAGTGAACGAAG
CGATCCCGATGCCGCTGGGTCACGGCGCGCTGGCTATCGGCGAACGCCGTAAGCTCGGCCACAGCCTGCGCGAACGTCGC
TACGATCGCGCTTACGTGCTGCCGAACTCGTTTAAATCGGCATTAGTCCCTTTCTTTGCCAATATCCCGCTGCGCACCGG
CTGGCGCGGCGAGATGCGCTACGGACTGCTCAACGACGCCCGGGTGCTGGACAAAGACGCCTGGCCGCTGATGGTGGAAC
GCTACGTGGCGCTGGCCTACGACAACGGCGTGATGCGCTGCGCCAAAGATCTGCCGCAGCCGCTGCTGTGGCCGCAGCTG
CAGGTCAACGAAGGGGAAAAGTCGCAGGCCTGCAGCGCTTTTAACCTGTCCTACGATCGGCCGATCGTCGGCTTCTGCCC
CGGTGCGGAGTTCGGCCCGGCCAAACGCTGGCCGCACTATCACTATGCTGCGCTGGCGAAAAAGCTTATCGACGATGGCT
ATCAGATTGCGCTTTTCGGCTCGGCGAAAGATAACGAGGCCGGCAAAGAGATCATCGCCGCCCTCAGCAGCGAGCAGCAG
GCCTGGTGCCGTAATCTGGCGGGTGAAACCCAGCTGGAGCAGGCGGTCATTCTGATCGCCGCCTGTAAAGCTGTAGTGAC
TAACGATTCGGGGCTGATGCACGTCGCCGCGGCGCTGGACCGCCCGCTGGTGGCGCTGTATGGCCCGAGCAGTCCGGACT
TTACCCCGCCGCTGTCGCATAAAGCGCGGGTTATCCGTCTGATTACCGGCTACCACAAGGTGCGCAAAGGCGATGCCGCC
GAAGGCTATCATCAGAGCCTGATCGACATCACCCCAGAACGCGTCCTGCAAGAGCTAAACGAACTGTTAGCGGAAAAAAC
CGAGCACGAGGAAGCGTAA

Upstream 100 bases:

>100_bases
TAACCTGCGCAAAGCGGGCTATGACAAACCGTTCAAAACCGTTGCCGAAGGCGTAACGGAATATATGGCCTGGCTAAACC
GCGACGCGTAAGAAACAAGC

Downstream 100 bases:

>100_bases
CGGATGCGGGTATTGATCGTTAAAACCTCCTCCATGGGCGACGTGCTGCACACGCTGCCCGCGCTAACCGACGCCGCGCA
GGCTATCCCCGGCATCCGCT

Product: ADP-heptose:LPS heptosyltransferase II

Products: NA

Alternate protein names: ADP-heptose--LPS heptosyltransferase II [H]

Number of amino acids: Translated: 352; Mature: 352

Protein sequence:

>352_residues
MKILVVGPSWVGDMMMSQSLYRTLRARYPQAIIDVMAPAWCRPLLSRMPEVNEAIPMPLGHGALAIGERRKLGHSLRERR
YDRAYVLPNSFKSALVPFFANIPLRTGWRGEMRYGLLNDARVLDKDAWPLMVERYVALAYDNGVMRCAKDLPQPLLWPQL
QVNEGEKSQACSAFNLSYDRPIVGFCPGAEFGPAKRWPHYHYAALAKKLIDDGYQIALFGSAKDNEAGKEIIAALSSEQQ
AWCRNLAGETQLEQAVILIAACKAVVTNDSGLMHVAAALDRPLVALYGPSSPDFTPPLSHKARVIRLITGYHKVRKGDAA
EGYHQSLIDITPERVLQELNELLAEKTEHEEA

Sequences:

>Translated_352_residues
MKILVVGPSWVGDMMMSQSLYRTLRARYPQAIIDVMAPAWCRPLLSRMPEVNEAIPMPLGHGALAIGERRKLGHSLRERR
YDRAYVLPNSFKSALVPFFANIPLRTGWRGEMRYGLLNDARVLDKDAWPLMVERYVALAYDNGVMRCAKDLPQPLLWPQL
QVNEGEKSQACSAFNLSYDRPIVGFCPGAEFGPAKRWPHYHYAALAKKLIDDGYQIALFGSAKDNEAGKEIIAALSSEQQ
AWCRNLAGETQLEQAVILIAACKAVVTNDSGLMHVAAALDRPLVALYGPSSPDFTPPLSHKARVIRLITGYHKVRKGDAA
EGYHQSLIDITPERVLQELNELLAEKTEHEEA
>Mature_352_residues
MKILVVGPSWVGDMMMSQSLYRTLRARYPQAIIDVMAPAWCRPLLSRMPEVNEAIPMPLGHGALAIGERRKLGHSLRERR
YDRAYVLPNSFKSALVPFFANIPLRTGWRGEMRYGLLNDARVLDKDAWPLMVERYVALAYDNGVMRCAKDLPQPLLWPQL
QVNEGEKSQACSAFNLSYDRPIVGFCPGAEFGPAKRWPHYHYAALAKKLIDDGYQIALFGSAKDNEAGKEIIAALSSEQQ
AWCRNLAGETQLEQAVILIAACKAVVTNDSGLMHVAAALDRPLVALYGPSSPDFTPPLSHKARVIRLITGYHKVRKGDAA
EGYHQSLIDITPERVLQELNELLAEKTEHEEA

Specific function: Lipopolysaccharide core biosynthesis. [C]

COG id: COG0859

COG function: function code M; ADP-heptose:LPS heptosyltransferase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the glycosyltransferase 9 family [H]

Homologues:

Organism=Escherichia coli, GI1790050, Length=346, Percent_Identity=87.8612716763006, Blast_Score=648, Evalue=0.0,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002201
- InterPro:   IPR011910 [H]

Pfam domain/function: PF01075 Glyco_transf_9 [H]

EC number: 2.-.-.- [C]

Molecular weight: Translated: 39290; Mature: 39290

Theoretical pI: Translated: 8.12; Mature: 8.12

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.7 %Cys     (Translated Protein)
3.1 %Met     (Translated Protein)
4.8 %Cys+Met (Translated Protein)
1.7 %Cys     (Mature Protein)
3.1 %Met     (Mature Protein)
4.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKILVVGPSWVGDMMMSQSLYRTLRARYPQAIIDVMAPAWCRPLLSRMPEVNEAIPMPLG
CEEEEECCHHHHHHHHHHHHHHHHHHHCHHHHHHHHCHHHHHHHHHHCCCCHHCCCCCCC
HGALAIGERRKLGHSLRERRYDRAYVLPNSFKSALVPFFANIPLRTGWRGEMRYGLLNDA
CCCHHHHHHHHHHHHHHHHHCCCEEECCCHHHHHHHHHHHCCCCCCCCCCCCEECCCCCC
RVLDKDAWPLMVERYVALAYDNGVMRCAKDLPQPLLWPQLQVNEGEKSQACSAFNLSYDR
HHHCCCCCHHHHHHHHHHHHCCCHHHHHHHCCCCCCCCCEECCCCCHHHHHHHCCCCCCC
PIVGFCPGAEFGPAKRWPHYHYAALAKKLIDDGYQIALFGSAKDNEAGKEIIAALSSEQQ
CEEEECCCCCCCCCCCCCCHHHHHHHHHHHCCCCEEEEEECCCCCHHHHHHHHHHCCHHH
AWCRNLAGETQLEQAVILIAACKAVVTNDSGLMHVAAALDRPLVALYGPSSPDFTPPLSH
HHHHHCCCCHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHCCCEEEEECCCCCCCCCCCCH
KARVIRLITGYHKVRKGDAAEGYHQSLIDITPERVLQELNELLAEKTEHEEA
HHHHHHHHHHHHHHHCCCCCCHHHHHHHHCCHHHHHHHHHHHHHHHHCCCCC
>Mature Secondary Structure
MKILVVGPSWVGDMMMSQSLYRTLRARYPQAIIDVMAPAWCRPLLSRMPEVNEAIPMPLG
CEEEEECCHHHHHHHHHHHHHHHHHHHCHHHHHHHHCHHHHHHHHHHCCCCHHCCCCCCC
HGALAIGERRKLGHSLRERRYDRAYVLPNSFKSALVPFFANIPLRTGWRGEMRYGLLNDA
CCCHHHHHHHHHHHHHHHHHCCCEEECCCHHHHHHHHHHHCCCCCCCCCCCCEECCCCCC
RVLDKDAWPLMVERYVALAYDNGVMRCAKDLPQPLLWPQLQVNEGEKSQACSAFNLSYDR
HHHCCCCCHHHHHHHHHHHHCCCHHHHHHHCCCCCCCCCEECCCCCHHHHHHHCCCCCCC
PIVGFCPGAEFGPAKRWPHYHYAALAKKLIDDGYQIALFGSAKDNEAGKEIIAALSSEQQ
CEEEECCCCCCCCCCCCCCHHHHHHHHHHHCCCCEEEEEECCCCCHHHHHHHHHHCCHHH
AWCRNLAGETQLEQAVILIAACKAVVTNDSGLMHVAAALDRPLVALYGPSSPDFTPPLSH
HHHHHCCCCHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHCCCEEEEECCCCCCCCCCCCH
KARVIRLITGYHKVRKGDAAEGYHQSLIDITPERVLQELNELLAEKTEHEEA
HHHHHHHHHHHHHHHCCCCCCHHHHHHHHCCHHHHHHHHHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8041620; 9278503; 2198271; 8478319 [H]