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The map label for this gene is ysaB [H]

Identifier: 238897024

GI number: 238897024

Start: 5016919

End: 5017233

Strand: Reverse

Name: ysaB [H]

Synonym: KP1_5271

Alternate gene names: 238897024

Gene position: 5017233-5016919 (Counterclockwise)

Preceding gene: 238897026

Following gene: 238897023

Centisome position: 95.59

GC content: 56.19

Gene sequence:

>315_bases
GTGGAGGAGAACGTGGTGAAAGGTGTTGTTTCCGTCATGCTGGTGCTGCTCCTCGCGGGCTGCAGCGAGACCGTCTCCCC
GCCGACGCAAAAAGCGCAGCGCGCTCGTATTACGCCGCAAACCACGCTCAATATGGCGCAGCTTTGCAAGGATCAGGCGG
CTATCCGCTATAACACGCAAACGCAGCTCGTTGACGTGAACCACTTTGAACAATTCCAGGCGAGCTATGAGCTTTCTGGC
CGTACCGGCAAGAATGAGCGTTTCATCTGTTCCTTTGACCCGGACGGCCAGTTTATGCATCTTTCGATGCGCTGA

Upstream 100 bases:

>100_bases
ATTAGTCTGAGTTTTCGGTCACAGACTTGTCGCAGTTTCATGATATTCGCAAAATACCTGTAATACTGAATCTTTAAGAT
AACAACTTGCTAACAAGGCG

Downstream 100 bases:

>100_bases
ATCGACCCCGCCTGGCGTAAATTTCGTCCGTTTTCCTGAAACAACGCCGTTTCGTACTGTATATCTCGCAGCCAGCGGGT
ATACTGACTCCTTCCTTTAA

Product: putative outer membrane protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 104; Mature: 104

Protein sequence:

>104_residues
MEENVVKGVVSVMLVLLLAGCSETVSPPTQKAQRARITPQTTLNMAQLCKDQAAIRYNTQTQLVDVNHFEQFQASYELSG
RTGKNERFICSFDPDGQFMHLSMR

Sequences:

>Translated_104_residues
MEENVVKGVVSVMLVLLLAGCSETVSPPTQKAQRARITPQTTLNMAQLCKDQAAIRYNTQTQLVDVNHFEQFQASYELSG
RTGKNERFICSFDPDGQFMHLSMR
>Mature_104_residues
MEENVVKGVVSVMLVLLLAGCSETVSPPTQKAQRARITPQTTLNMAQLCKDQAAIRYNTQTQLVDVNHFEQFQASYELSG
RTGKNERFICSFDPDGQFMHLSMR

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell membrane; Lipid-anchor (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI87082291, Length=92, Percent_Identity=57.6086956521739, Blast_Score=116, Evalue=3e-28,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 11697; Mature: 11697

Theoretical pI: Translated: 7.35; Mature: 7.35

Prosite motif: PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.9 %Cys     (Translated Protein)
4.8 %Met     (Translated Protein)
7.7 %Cys+Met (Translated Protein)
2.9 %Cys     (Mature Protein)
4.8 %Met     (Mature Protein)
7.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MEENVVKGVVSVMLVLLLAGCSETVSPPTQKAQRARITPQTTLNMAQLCKDQAAIRYNTQ
CCCHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHCCCCCHHHHHHHHHHHHCCEEEECCC
TQLVDVNHFEQFQASYELSGRTGKNERFICSFDPDGQFMHLSMR
EEEEECHHHHHHHHHEECCCCCCCCCCEEEEECCCCCEEEEECC
>Mature Secondary Structure
MEENVVKGVVSVMLVLLLAGCSETVSPPTQKAQRARITPQTTLNMAQLCKDQAAIRYNTQ
CCCHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHCCCCCHHHHHHHHHHHHCCEEEECCC
TQLVDVNHFEQFQASYELSGRTGKNERFICSFDPDGQFMHLSMR
EEEEECHHHHHHHHHEECCCCCCCCCCEEEEECCCCCEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: NA