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The map label for this gene is yhjK [H]

Identifier: 238896977

GI number: 238896977

Start: 4956121

End: 4958094

Strand: Reverse

Name: yhjK [H]

Synonym: KP1_5220

Alternate gene names: 238896977

Gene position: 4958094-4956121 (Counterclockwise)

Preceding gene: 238896978

Following gene: 238896976

Centisome position: 94.47

GC content: 61.2

Gene sequence:

>1974_bases
ATGGCGATGGTCGCGAGCGTGTCCATGGCCTTTGTATTGGTTTTTTGTACTATTTTGCTGTTTCACTTTGTGCAACAGAG
TCGCTTTACCACGGCCACGCAGTTAGAAAGTATCGCGCGATCCGTTCGCGAACCGCTGTCTGCGGCTATTCTGAAAGCCG
ATATTCCGGAAGCGGAAGCCATTTTAAGCCGTATCCAGCCTGCTGGCATCGTCAGCCGGGCGGATGTGGTATTGCCGAAC
CAGTTCCAGGCGCTGCGGATGCGATTTATCCCCGAGCGGCCGGTGCCGGTAACCGTCACCCGGCTGTTTGAACTGCCGGT
GCAGATTTCGCTGCCCATTTATTCGCTGGAGCGGCCGGCCAACCCGCAGCCGCTGGCCTATCTGGTGCTGCAGGCCGACT
CCTATCGCATGTATAAATTCGTCATGAGCGCCCTTGCTACGTTAGTGACTGCTTACTTACTTCTGGTGCTGATGCTGACG
GTGGCGCTCACCTGGTGCATCAACCGGCTGATGGTTCGCCCTCTGCGGCGTATCGCCCGCGAGCTGAACGATCTCTCCCA
GCAGGAGCGTCTTGGCCATCAGCTGACCCTGCCGCGCCTGCACCATGACGACGAGATCGGTATGCTGGTGCGTAGCTATA
ACCGCAACCAGCAGAGCCTGGTCCGCCAGCATGATGAGCTGTCCATCCAGTCGACCCGCTTCCCGGTCTCCGAGCTGCCG
AATAAAGCCTTTTTGCTGGCGATGCTGGAGCAGACGGTGGCCCGCCCGCAGAGCGCCGCGCTGATCGTCGTCGCCTGTGA
AACCCTGCAGGACGCCGCCGGGGTCCTCAAGGAGAGTCAGCGCGAAATGCTGCTCCTGACGCTGGTGGAGAAGCTGCGGG
CCGCGATCCCGCCGCAGATGGTGCTGGCTCAGGTGAGCGGGTATGACTTCGCGATTCTCGCCGATGGCCTCGCCGAACCA
TGGCAGGCGGTAACGTTAAGTAAGCAAGTGCTCACTATTATTAATGAGCGTTTACCGCTGCATGGGCTGCAGCTGCGCCC
CTACGCCAGCGTCGGGATCGCCATGTTCCACGCCGGGCTCAGCGCCGAGCAGTTTTACCGGCGCGCGGTGTCGGCCGCCG
TCACCGCACGACGTAAAGGCAAAAACCAGATCGAGTTCTTCGATCCCGAGCAGATGGAAAAGGCTCAGCGCCGCCTGATG
GAAGAGCACGACATTATGACCGCGCTCGATAACCAGCAGTTCGCGATCTGGCTGCAGCCGCAGGTGGCCTGCGCCAGCGG
CGAGATCTGCGGCGCCGAGGTACTGCTGCGCCAGCGGCAGGCGGATGGCAGCTGGTCGCTACCGCCGGCGCTGATTGAAC
GTATTGAATCCTGCGGGCTGATTATCCCGGTCGGCTACTGGGTAATGGAAGAGGCCTGCCGCCAGCTTGCGGCCTGGCAA
AGCCAGGGGATTATGCTGCCGCTGTCGGTCAATGTTTCGCTGCTCCAGCTGCTGGAGCATGACCGCGGCGAGGAGATGCT
AAAGCTGATCGCCCGCTACCGCATCGCCCCGGGCACCCTCATCCTCGAGGTGACGGAGAGCTGCCGGATGGACGATCCGC
AGGATGTGATGGCGCGGTTGCGACCGCTGCGCGAGGCCGGGGTACAGATTGCGCTGGATGATTTTGGCATGGGTTATGCC
GGGTTGCACCAGCTGCAGCAGATGAAAGCTCTGCCGGTGGATATTCTGAAAATCGATAAAGTATTCATCGATATGCTGCC
GGAGGATGTCAGCATGGTGCCGGCGATGATCCAGCTCGCGCGCGGCCTGTCGCTGCGTATCGTGGCGGAAGGGGTGGAGA
ACGACGCCCAGCGCCGCTGGTTGCAAGCCGCCGGCGTCGAGGTGCTCCAGGGCCATCTGTTCGGTTGCGCTTTGCCGCAG
GAGGCATTCAGCGCGCGCTATCTCTCCCCGGTTCGGGAGGATGAAAATTTGTAA

Upstream 100 bases:

>100_bases
CAGCCTGAAACGACCGGGATTGAAGGATTGATACCGGGTATGTATTCAGTATCAGTGGAGAACACCGTTGCGCGTCAGCC
GTTCACTTACAATCAAACAG

Downstream 100 bases:

>100_bases
ATGTTTTGTTGACTTGTGCGAGTCAGCTCAAAGATTTTAACAATTGCGTTGCACTTTCGGCGTTAGTTATTTCTGAAATG
TTTCCAGGGTGTTATTTTTA

Product: putative phosphodiesterase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 657; Mature: 656

Protein sequence:

>657_residues
MAMVASVSMAFVLVFCTILLFHFVQQSRFTTATQLESIARSVREPLSAAILKADIPEAEAILSRIQPAGIVSRADVVLPN
QFQALRMRFIPERPVPVTVTRLFELPVQISLPIYSLERPANPQPLAYLVLQADSYRMYKFVMSALATLVTAYLLLVLMLT
VALTWCINRLMVRPLRRIARELNDLSQQERLGHQLTLPRLHHDDEIGMLVRSYNRNQQSLVRQHDELSIQSTRFPVSELP
NKAFLLAMLEQTVARPQSAALIVVACETLQDAAGVLKESQREMLLLTLVEKLRAAIPPQMVLAQVSGYDFAILADGLAEP
WQAVTLSKQVLTIINERLPLHGLQLRPYASVGIAMFHAGLSAEQFYRRAVSAAVTARRKGKNQIEFFDPEQMEKAQRRLM
EEHDIMTALDNQQFAIWLQPQVACASGEICGAEVLLRQRQADGSWSLPPALIERIESCGLIIPVGYWVMEEACRQLAAWQ
SQGIMLPLSVNVSLLQLLEHDRGEEMLKLIARYRIAPGTLILEVTESCRMDDPQDVMARLRPLREAGVQIALDDFGMGYA
GLHQLQQMKALPVDILKIDKVFIDMLPEDVSMVPAMIQLARGLSLRIVAEGVENDAQRRWLQAAGVEVLQGHLFGCALPQ
EAFSARYLSPVREDENL

Sequences:

>Translated_657_residues
MAMVASVSMAFVLVFCTILLFHFVQQSRFTTATQLESIARSVREPLSAAILKADIPEAEAILSRIQPAGIVSRADVVLPN
QFQALRMRFIPERPVPVTVTRLFELPVQISLPIYSLERPANPQPLAYLVLQADSYRMYKFVMSALATLVTAYLLLVLMLT
VALTWCINRLMVRPLRRIARELNDLSQQERLGHQLTLPRLHHDDEIGMLVRSYNRNQQSLVRQHDELSIQSTRFPVSELP
NKAFLLAMLEQTVARPQSAALIVVACETLQDAAGVLKESQREMLLLTLVEKLRAAIPPQMVLAQVSGYDFAILADGLAEP
WQAVTLSKQVLTIINERLPLHGLQLRPYASVGIAMFHAGLSAEQFYRRAVSAAVTARRKGKNQIEFFDPEQMEKAQRRLM
EEHDIMTALDNQQFAIWLQPQVACASGEICGAEVLLRQRQADGSWSLPPALIERIESCGLIIPVGYWVMEEACRQLAAWQ
SQGIMLPLSVNVSLLQLLEHDRGEEMLKLIARYRIAPGTLILEVTESCRMDDPQDVMARLRPLREAGVQIALDDFGMGYA
GLHQLQQMKALPVDILKIDKVFIDMLPEDVSMVPAMIQLARGLSLRIVAEGVENDAQRRWLQAAGVEVLQGHLFGCALPQ
EAFSARYLSPVREDENL
>Mature_656_residues
AMVASVSMAFVLVFCTILLFHFVQQSRFTTATQLESIARSVREPLSAAILKADIPEAEAILSRIQPAGIVSRADVVLPNQ
FQALRMRFIPERPVPVTVTRLFELPVQISLPIYSLERPANPQPLAYLVLQADSYRMYKFVMSALATLVTAYLLLVLMLTV
ALTWCINRLMVRPLRRIARELNDLSQQERLGHQLTLPRLHHDDEIGMLVRSYNRNQQSLVRQHDELSIQSTRFPVSELPN
KAFLLAMLEQTVARPQSAALIVVACETLQDAAGVLKESQREMLLLTLVEKLRAAIPPQMVLAQVSGYDFAILADGLAEPW
QAVTLSKQVLTIINERLPLHGLQLRPYASVGIAMFHAGLSAEQFYRRAVSAAVTARRKGKNQIEFFDPEQMEKAQRRLME
EHDIMTALDNQQFAIWLQPQVACASGEICGAEVLLRQRQADGSWSLPPALIERIESCGLIIPVGYWVMEEACRQLAAWQS
QGIMLPLSVNVSLLQLLEHDRGEEMLKLIARYRIAPGTLILEVTESCRMDDPQDVMARLRPLREAGVQIALDDFGMGYAG
LHQLQQMKALPVDILKIDKVFIDMLPEDVSMVPAMIQLARGLSLRIVAEGVENDAQRRWLQAAGVEVLQGHLFGCALPQE
AFSARYLSPVREDENL

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 HAMP domain [H]

Homologues:

Organism=Escherichia coli, GI226510982, Length=635, Percent_Identity=68.6614173228347, Blast_Score=915, Evalue=0.0,
Organism=Escherichia coli, GI87081921, Length=430, Percent_Identity=30.2325581395349, Blast_Score=186, Evalue=6e-48,
Organism=Escherichia coli, GI1787541, Length=437, Percent_Identity=28.8329519450801, Blast_Score=169, Evalue=5e-43,
Organism=Escherichia coli, GI87081743, Length=242, Percent_Identity=36.7768595041322, Blast_Score=149, Evalue=4e-37,
Organism=Escherichia coli, GI1790496, Length=262, Percent_Identity=31.6793893129771, Blast_Score=123, Evalue=4e-29,
Organism=Escherichia coli, GI87081845, Length=234, Percent_Identity=33.7606837606838, Blast_Score=120, Evalue=2e-28,
Organism=Escherichia coli, GI1786507, Length=257, Percent_Identity=33.0739299610895, Blast_Score=113, Evalue=5e-26,
Organism=Escherichia coli, GI87082096, Length=251, Percent_Identity=32.2709163346614, Blast_Score=109, Evalue=6e-25,
Organism=Escherichia coli, GI1788502, Length=259, Percent_Identity=31.6602316602317, Blast_Score=106, Evalue=4e-24,
Organism=Escherichia coli, GI1788849, Length=279, Percent_Identity=29.7491039426523, Blast_Score=105, Evalue=7e-24,
Organism=Escherichia coli, GI87081980, Length=255, Percent_Identity=30.5882352941176, Blast_Score=102, Evalue=9e-23,
Organism=Escherichia coli, GI1787055, Length=263, Percent_Identity=25.8555133079848, Blast_Score=81, Evalue=2e-16,
Organism=Escherichia coli, GI1787410, Length=154, Percent_Identity=29.2207792207792, Blast_Score=65, Evalue=2e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001054
- InterPro:   IPR000160
- InterPro:   IPR001633
- InterPro:   IPR003660 [H]

Pfam domain/function: PF00563 EAL; PF00990 GGDEF; PF00672 HAMP [H]

EC number: NA

Molecular weight: Translated: 73700; Mature: 73569

Theoretical pI: Translated: 6.31; Mature: 6.31

Prosite motif: PS50885 HAMP ; PS50883 EAL ; PS50887 GGDEF

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
4.0 %Met     (Translated Protein)
5.3 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
3.8 %Met     (Mature Protein)
5.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAMVASVSMAFVLVFCTILLFHFVQQSRFTTATQLESIARSVREPLSAAILKADIPEAEA
CCHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHH
ILSRIQPAGIVSRADVVLPNQFQALRMRFIPERPVPVTVTRLFELPVQISLPIYSLERPA
HHHHCCCCCCCCCCCEECCCHHHHHHHHHCCCCCCCHHHHHHHHCCEEEECCCEECCCCC
NPQPLAYLVLQADSYRMYKFVMSALATLVTAYLLLVLMLTVALTWCINRLMVRPLRRIAR
CCCCEEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
ELNDLSQQERLGHQLTLPRLHHDDEIGMLVRSYNRNQQSLVRQHDELSIQSTRFPVSELP
HHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHCCCCHHHHHHHHHCCCCCCCCCCHHHCC
NKAFLLAMLEQTVARPQSAALIVVACETLQDAAGVLKESQREMLLLTLVEKLRAAIPPQM
CHHHHHHHHHHHHCCCCCCEEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHH
VLAQVSGYDFAILADGLAEPWQAVTLSKQVLTIINERLPLHGLQLRPYASVGIAMFHAGL
HHHHHCCCCEEEEECCCCCCHHHHHHHHHHHHHHHHCCCCCCCEECCHHHHHHHHHHCCC
SAEQFYRRAVSAAVTARRKGKNQIEFFDPEQMEKAQRRLMEEHDIMTALDNQQFAIWLQP
CHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCEEEEEECC
QVACASGEICGAEVLLRQRQADGSWSLPPALIERIESCGLIIPVGYWVMEEACRQLAAWQ
CEEECCCCCHHHHHHHHHHCCCCCCCCCHHHHHHHHHCCEEEEHHHHHHHHHHHHHHHHH
SQGIMLPLSVNVSLLQLLEHDRGEEMLKLIARYRIAPGTLILEVTESCRMDDPQDVMARL
HCCEEEEEECCHHHHHHHHCCCHHHHHHHHHHHCCCCCCEEEEEHHHCCCCCHHHHHHHH
RPLREAGVQIALDDFGMGYAGLHQLQQMKALPVDILKIDKVFIDMLPEDVSMVPAMIQLA
HHHHHCCCEEEECCCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHH
RGLSLRIVAEGVENDAQRRWLQAAGVEVLQGHLFGCALPQEAFSARYLSPVREDENL
CCCEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCCCCCCC
>Mature Secondary Structure 
AMVASVSMAFVLVFCTILLFHFVQQSRFTTATQLESIARSVREPLSAAILKADIPEAEA
CHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHH
ILSRIQPAGIVSRADVVLPNQFQALRMRFIPERPVPVTVTRLFELPVQISLPIYSLERPA
HHHHCCCCCCCCCCCEECCCHHHHHHHHHCCCCCCCHHHHHHHHCCEEEECCCEECCCCC
NPQPLAYLVLQADSYRMYKFVMSALATLVTAYLLLVLMLTVALTWCINRLMVRPLRRIAR
CCCCEEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
ELNDLSQQERLGHQLTLPRLHHDDEIGMLVRSYNRNQQSLVRQHDELSIQSTRFPVSELP
HHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHCCCCHHHHHHHHHCCCCCCCCCCHHHCC
NKAFLLAMLEQTVARPQSAALIVVACETLQDAAGVLKESQREMLLLTLVEKLRAAIPPQM
CHHHHHHHHHHHHCCCCCCEEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHH
VLAQVSGYDFAILADGLAEPWQAVTLSKQVLTIINERLPLHGLQLRPYASVGIAMFHAGL
HHHHHCCCCEEEEECCCCCCHHHHHHHHHHHHHHHHCCCCCCCEECCHHHHHHHHHHCCC
SAEQFYRRAVSAAVTARRKGKNQIEFFDPEQMEKAQRRLMEEHDIMTALDNQQFAIWLQP
CHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCEEEEEECC
QVACASGEICGAEVLLRQRQADGSWSLPPALIERIESCGLIIPVGYWVMEEACRQLAAWQ
CEEECCCCCHHHHHHHHHHCCCCCCCCCHHHHHHHHHCCEEEEHHHHHHHHHHHHHHHHH
SQGIMLPLSVNVSLLQLLEHDRGEEMLKLIARYRIAPGTLILEVTESCRMDDPQDVMARL
HCCEEEEEECCHHHHHHHHCCCHHHHHHHHHHHCCCCCCEEEEEHHHCCCCCHHHHHHHH
RPLREAGVQIALDDFGMGYAGLHQLQQMKALPVDILKIDKVFIDMLPEDVSMVPAMIQLA
HHHHHCCCEEEECCCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHH
RGLSLRIVAEGVENDAQRRWLQAAGVEVLQGHLFGCALPQEAFSARYLSPVREDENL
CCCEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 8041620; 9278503; 10493123 [H]