Click here to switch to the map view.

The map label for this gene is yfbF [H]

Identifier: 238896943

GI number: 238896943

Start: 4916742

End: 4917725

Strand: Reverse

Name: yfbF [H]

Synonym: KP1_5184

Alternate gene names: 238896943

Gene position: 4917725-4916742 (Counterclockwise)

Preceding gene: 238896944

Following gene: 238896942

Centisome position: 93.7

GC content: 60.37

Gene sequence:

>984_bases
ATGCTTACTTACCCTCCCGTGAAGAAGGTCTCGGTGGTTATCCCGGTTTATAACGAACAGGATAGCCTGCCGGAACTGCT
TCGTCGTTCGGATGCCGCCTGCGCCACCCTGGGGCGGCAATATGAAATTCTGTTGATCGACGATGGCAGCAGCGACGATT
CCGCGCGCATGCTCACCGAAGCCGCCGAGGCGGAAGGCAGCCACGTCGTCGCCGTGCTGTTAAACCGTAACTACGGCCAG
CACTCGGCGATCATGGCCGGCTTCAGCCATGTAACCGGCGATCTGATTATTACCCTCGACGCCGACCTGCAAAACCCGCC
GGAGGAGATCCCGCGGCTGGTGGCGAAGGCTGATGAAGGTTACGACGTGGTGGGCACTGTCCGCCAGAACCGTCAGGACA
GCATCTTCCGTAAAACCGCGTCGAAGATGATCAACCGCCTGATCCAGCGCACCACCGGCAAAGCGATGGGCGACTACGGC
TGCATGCTGCGCGCTTACCGCCGCCATATCATCGACGCCATGCTCAACTGCCATGAGCGCAGCACCTTTATCCCGATCCT
GGCGAATACCTTCGCCCGGCGCGCGGTGGAGATCCCGGTGATGCACGCCGAGCGCGAATTCGGCGACTCCAAATACAGCT
TCATGCGCCTGATCAACCTGATGTACGACCTGGTGACCTGTCTGACCACCACGCCGCTGCGTCTGCTCAGCATTTTCGGC
AGCGTGATTGCCCTGCTGGGCTTCGCCTTCGGCCTGCTGCTGGTGGTGCTGCGTCTGGCCTTTGGCCCGCAGTGGGCGGC
GGAAGGGGTGTTTATGCTCTTCGCCGTGCTGTTCATGTTCATCGGCGCCCAGTTTGTCGGTATGGGCCTGCTCGGGGAGT
ATATCGGCCGCATCTATAACGACGTGCGCGCCCGCCCCCGCTACTTTATTCAACGTGTTGTTCGCCAGCCGGAAACGGCA
TCTAAAGAGGAAGATCGTTCATGA

Upstream 100 bases:

>100_bases
AACAGCGCCCGCATCTGCTCTCTCCCGTTGTTCCCGGATATGACCGATGACGATGTCACTCGCGTTATCTCCGCACTGCG
CCAGTTGTCAGGACGTTGAT

Downstream 100 bases:

>100_bases
AAGCCGTAGTCTTCGCTTATCACGATATGGGCTGCACCGGTATCCAGTCCCTGCTGGACGCCGGGTATGATATCGCTGCT
ATTTTCACCCACCCGGATAA

Product: undecaprenyl phosphate 4-deoxy-4-formamido-L-arabinose transferase

Products: NA

Alternate protein names: Undecaprenyl-phosphate Ara4FN transferase; Ara4FN transferase [H]

Number of amino acids: Translated: 327; Mature: 327

Protein sequence:

>327_residues
MLTYPPVKKVSVVIPVYNEQDSLPELLRRSDAACATLGRQYEILLIDDGSSDDSARMLTEAAEAEGSHVVAVLLNRNYGQ
HSAIMAGFSHVTGDLIITLDADLQNPPEEIPRLVAKADEGYDVVGTVRQNRQDSIFRKTASKMINRLIQRTTGKAMGDYG
CMLRAYRRHIIDAMLNCHERSTFIPILANTFARRAVEIPVMHAEREFGDSKYSFMRLINLMYDLVTCLTTTPLRLLSIFG
SVIALLGFAFGLLLVVLRLAFGPQWAAEGVFMLFAVLFMFIGAQFVGMGLLGEYIGRIYNDVRARPRYFIQRVVRQPETA
SKEEDRS

Sequences:

>Translated_327_residues
MLTYPPVKKVSVVIPVYNEQDSLPELLRRSDAACATLGRQYEILLIDDGSSDDSARMLTEAAEAEGSHVVAVLLNRNYGQ
HSAIMAGFSHVTGDLIITLDADLQNPPEEIPRLVAKADEGYDVVGTVRQNRQDSIFRKTASKMINRLIQRTTGKAMGDYG
CMLRAYRRHIIDAMLNCHERSTFIPILANTFARRAVEIPVMHAEREFGDSKYSFMRLINLMYDLVTCLTTTPLRLLSIFG
SVIALLGFAFGLLLVVLRLAFGPQWAAEGVFMLFAVLFMFIGAQFVGMGLLGEYIGRIYNDVRARPRYFIQRVVRQPETA
SKEEDRS
>Mature_327_residues
MLTYPPVKKVSVVIPVYNEQDSLPELLRRSDAACATLGRQYEILLIDDGSSDDSARMLTEAAEAEGSHVVAVLLNRNYGQ
HSAIMAGFSHVTGDLIITLDADLQNPPEEIPRLVAKADEGYDVVGTVRQNRQDSIFRKTASKMINRLIQRTTGKAMGDYG
CMLRAYRRHIIDAMLNCHERSTFIPILANTFARRAVEIPVMHAEREFGDSKYSFMRLINLMYDLVTCLTTTPLRLLSIFG
SVIALLGFAFGLLLVVLRLAFGPQWAAEGVFMLFAVLFMFIGAQFVGMGLLGEYIGRIYNDVRARPRYFIQRVVRQPETA
SKEEDRS

Specific function: Catalyzes the transfer of 4-deoxy-4-formamido-L- arabinose from UDP to undecaprenyl phosphate. The modified arabinose is attached to lipid A and is required for resistance to polymyxin and cationic antimicrobial peptides [H]

COG id: COG0463

COG function: function code M; Glycosyltransferases involved in cell wall biogenesis

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the glycosyltransferase 2 family [H]

Homologues:

Organism=Homo sapiens, GI4503363, Length=241, Percent_Identity=28.2157676348548, Blast_Score=98, Evalue=1e-20,
Organism=Escherichia coli, GI1788588, Length=325, Percent_Identity=83.3846153846154, Blast_Score=576, Evalue=1e-166,
Organism=Escherichia coli, GI1788692, Length=312, Percent_Identity=32.0512820512821, Blast_Score=169, Evalue=2e-43,
Organism=Caenorhabditis elegans, GI71999402, Length=242, Percent_Identity=25.2066115702479, Blast_Score=71, Evalue=6e-13,
Organism=Saccharomyces cerevisiae, GI6325441, Length=228, Percent_Identity=24.5614035087719, Blast_Score=68, Evalue=3e-12,
Organism=Drosophila melanogaster, GI24585265, Length=236, Percent_Identity=27.9661016949153, Blast_Score=91, Evalue=1e-18,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR022857
- InterPro:   IPR001173 [H]

Pfam domain/function: PF00535 Glycos_transf_2 [H]

EC number: =2.7.8.30 [H]

Molecular weight: Translated: 36680; Mature: 36680

Theoretical pI: Translated: 7.54; Mature: 7.54

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
4.0 %Met     (Translated Protein)
5.2 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
4.0 %Met     (Mature Protein)
5.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLTYPPVKKVSVVIPVYNEQDSLPELLRRSDAACATLGRQYEILLIDDGSSDDSARMLTE
CCCCCCCCCEEEEEEECCCCCCHHHHHHHCCHHHHHCCCCEEEEEEECCCCCHHHHHHHH
AAEAEGSHVVAVLLNRNYGQHSAIMAGFSHVTGDLIITLDADLQNPPEEIPRLVAKADEG
HHHCCCCEEEEEEEECCCCHHHHHHHHHHHCCCCEEEEEECCCCCCHHHHHHHHHHCCCC
YDVVGTVRQNRQDSIFRKTASKMINRLIQRTTGKAMGDYGCMLRAYRRHIIDAMLNCHER
CCHHHHHHCCHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHC
STFIPILANTFARRAVEIPVMHAEREFGDSKYSFMRLINLMYDLVTCLTTTPLRLLSIFG
CCHHHHHHHHHHHHHHHCCHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
SVIALLGFAFGLLLVVLRLAFGPQWAAEGVFMLFAVLFMFIGAQFVGMGLLGEYIGRIYN
HHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
DVRARPRYFIQRVVRQPETASKEEDRS
HHHCCHHHHHHHHHHCCCCCCCCCCCC
>Mature Secondary Structure
MLTYPPVKKVSVVIPVYNEQDSLPELLRRSDAACATLGRQYEILLIDDGSSDDSARMLTE
CCCCCCCCCEEEEEEECCCCCCHHHHHHHCCHHHHHCCCCEEEEEEECCCCCHHHHHHHH
AAEAEGSHVVAVLLNRNYGQHSAIMAGFSHVTGDLIITLDADLQNPPEEIPRLVAKADEG
HHHCCCCEEEEEEEECCCCHHHHHHHHHHHCCCCEEEEEECCCCCCHHHHHHHHHHCCCC
YDVVGTVRQNRQDSIFRKTASKMINRLIQRTTGKAMGDYGCMLRAYRRHIIDAMLNCHER
CCHHHHHHCCHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHC
STFIPILANTFARRAVEIPVMHAEREFGDSKYSFMRLINLMYDLVTCLTTTPLRLLSIFG
CCHHHHHHHHHHHHHHHCCHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
SVIALLGFAFGLLLVVLRLAFGPQWAAEGVFMLFAVLFMFIGAQFVGMGLLGEYIGRIYN
HHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
DVRARPRYFIQRVVRQPETASKEEDRS
HHHCCHHHHHHHHHHCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: NA