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The map label for this gene is dcrB [H]

Identifier: 238896935

GI number: 238896935

Start: 4908533

End: 4909090

Strand: Direct

Name: dcrB [H]

Synonym: KP1_5175

Alternate gene names: 238896935

Gene position: 4908533-4909090 (Clockwise)

Preceding gene: 238896934

Following gene: 238896937

Centisome position: 93.52

GC content: 59.5

Gene sequence:

>558_bases
ATGCGCAATTTGGTTAAATATGTCGGTATTGGCCTGCTGGTGATGGGGCTTGCCGCCTGCGATAACAGCGATTCAAAAGC
GCCAACCGTTGGCGCAGCAGCGGAGAGCAATGCCAGCGGCCAGGCAATCAGCCTGCTGGATGGCAAGCTGAGCTTCACCC
TGCCTGCGGGCATGGCCGACCAGAGCGGCAAACTGGGTACCCAGGCGAACAATATGCACGTCTACTCTGACGCTACCGGC
CAGAAAGCGGTCATCGTCATCGTCGGCGACAGCACCAATGAAGATCTGGCGGTGCTGGCGAAACGCCTGGAAGATCAGCA
GCGCAGCCGCGACCCGCAGCTGCAGGTGGTGAGCAATAAACCGCTGGAGATTAAAGGCCATACCCTGCAGCAGCTGGACA
GCATCATCTCCGCCAAGGGGCAGACCGCCTGGTCTTCCGTGATCCTCGGCAAAGTGGATGACAAGCTGCTGACCCTGCAG
GTCACCCTGCCGGCGGATAACCAGCAGCAGGCGCAGACCGAAGCGGAAAGCATCATCAACACCCTCACCATCCAGTAA

Upstream 100 bases:

>100_bases
GATTTGTCGGCATTACAGCCGAGTTAAAGGTACTCGCGGGCTGATGTGTTAAGATAGCCGGATGAGCCATTAGTGGCCGT
TTATCGAAAGGAAGATGTCA

Downstream 100 bases:

>100_bases
TTACTGGCCTGGTGCGCTGGCCTCCGGTTCGCTAACCGGGGGCCGTTTTTTTAGCCGCCAGCCCAACAGCAGCGCCGCCA
TCACCAGCCCCGCCGCGGCG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 185; Mature: 185

Protein sequence:

>185_residues
MRNLVKYVGIGLLVMGLAACDNSDSKAPTVGAAAESNASGQAISLLDGKLSFTLPAGMADQSGKLGTQANNMHVYSDATG
QKAVIVIVGDSTNEDLAVLAKRLEDQQRSRDPQLQVVSNKPLEIKGHTLQQLDSIISAKGQTAWSSVILGKVDDKLLTLQ
VTLPADNQQQAQTEAESIINTLTIQ

Sequences:

>Translated_185_residues
MRNLVKYVGIGLLVMGLAACDNSDSKAPTVGAAAESNASGQAISLLDGKLSFTLPAGMADQSGKLGTQANNMHVYSDATG
QKAVIVIVGDSTNEDLAVLAKRLEDQQRSRDPQLQVVSNKPLEIKGHTLQQLDSIISAKGQTAWSSVILGKVDDKLLTLQ
VTLPADNQQQAQTEAESIINTLTIQ
>Mature_185_residues
MRNLVKYVGIGLLVMGLAACDNSDSKAPTVGAAAESNASGQAISLLDGKLSFTLPAGMADQSGKLGTQANNMHVYSDATG
QKAVIVIVGDSTNEDLAVLAKRLEDQQRSRDPQLQVVSNKPLEIKGHTLQQLDSIISAKGQTAWSSVILGKVDDKLLTLQ
VTLPADNQQQAQTEAESIINTLTIQ

Specific function: Required for phage C1 adsorption [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Periplasm [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI87082269, Length=185, Percent_Identity=78.3783783783784, Blast_Score=296, Evalue=7e-82,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR014894 [H]

Pfam domain/function: PF08786 DUF1795 [H]

EC number: NA

Molecular weight: Translated: 19525; Mature: 19525

Theoretical pI: Translated: 4.90; Mature: 4.90

Prosite motif: PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
2.7 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
2.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRNLVKYVGIGLLVMGLAACDNSDSKAPTVGAAAESNASGQAISLLDGKLSFTLPAGMAD
CCHHHHHHHHHHHHHHHHHCCCCCCCCCEECCCCCCCCCCCEEEEECCCEEEEECCCCCC
QSGKLGTQANNMHVYSDATGQKAVIVIVGDSTNEDLAVLAKRLEDQQRSRDPQLQVVSNK
CCCCCCCCCCCEEEEECCCCCEEEEEEECCCCCCHHHHHHHHHHHHHHCCCCCEEEECCC
PLEIKGHTLQQLDSIISAKGQTAWSSVILGKVDDKLLTLQVTLPADNQQQAQTEAESIIN
CEEECCCHHHHHHHHHHCCCCCHHHHEEEECCCCEEEEEEEEECCCCHHHHHHHHHHHHH
TLTIQ
HHCCC
>Mature Secondary Structure
MRNLVKYVGIGLLVMGLAACDNSDSKAPTVGAAAESNASGQAISLLDGKLSFTLPAGMAD
CCHHHHHHHHHHHHHHHHHCCCCCCCCCEECCCCCCCCCCCEEEEECCCEEEEECCCCCC
QSGKLGTQANNMHVYSDATGQKAVIVIVGDSTNEDLAVLAKRLEDQQRSRDPQLQVVSNK
CCCCCCCCCCCEEEEECCCCCEEEEEEECCCCCCHHHHHHHHHHHHHHCCCCCEEEECCC
PLEIKGHTLQQLDSIISAKGQTAWSSVILGKVDDKLLTLQVTLPADNQQQAQTEAESIIN
CEEECCCHHHHHHHHHHCCCCCHHHHEEEECCCCEEEEEEEEECCCCHHHHHHHHHHHHH
TLTIQ
HHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8041620; 9278503; 8752353 [H]