Click here to switch to the map view.

The map label for this gene is yhhN [H]

Identifier: 238896931

GI number: 238896931

Start: 4904323

End: 4904949

Strand: Direct

Name: yhhN [H]

Synonym: KP1_5171

Alternate gene names: 238896931

Gene position: 4904323-4904949 (Clockwise)

Preceding gene: 238896929

Following gene: 238896932

Centisome position: 93.44

GC content: 61.08

Gene sequence:

>627_bases
ATGCTTTGGTCATTTATTGCTGTCTGTTTCTCCGCATGGCTTTATGTCGATGCATCCTATCGTGGGCCGGCATGGCGACG
CTGGGTTTTCAAACCTGTCACCCTGATTCTGTTGCTGTTACTGGCCTGGCAGGCGCCGATGTTCAATGCCATCAGCTATC
TGGTGCTGGCTGGCCTGTGCGCCTCGCTGCTCGGCGACGCCCTGACCCTGCTGCCGCGCCAGCGGGTGATGTACGCGGTG
GGCGCTTTCTTCCTGTCACATCTGCTGTATACCATCTGGTTCGCCAGCCAGCTGACGCTGTCGTTCTTCTGGCCGCTGCC
GCTGGTGCTGCTGGTATTCGGCGCCCTGCTAATGGCGGTGATCTGGAGTCGGCTGGAAGAGATGAAAATGCCGGTGCTGA
CCTTTATCGGAATGACGCTGGTAATGGTCTGGCTGGCCGGCGAGCTGTGGTTTGCCCGCCCCACCAACACCCCGCTGTCC
GGTTTCGCCGGCGCAGCCCTGCTGCTGCTGAGCAATGCCGTGTGGCTGGTGAGCCACTATCGTCGCCGCTTCCGCGCCGA
TAACGCCATCGCCGCCGCGTTCTACTTTGCCGGCCACTTCCTGATCGTGCGCGCGCTGTACCTGTAA

Upstream 100 bases:

>100_bases
TCGGGAATAACATTGTCATCTGCTACGCCAAACCACTACACTGAGTTGTAGCATCACGCATCCGTAACTTTCTTTATGAT
AACAGATACAGGGACTTACT

Downstream 100 bases:

>100_bases
TTTAGTCCTTGACTCTGGAGTCGACTCCAGAGTGTATCCTACGGCTAATGAGAAAATTATCATTTCCCGGAGGGTGCCAT
GTCGACTCCAGACGCGCAGG

Product: putative enzyme

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 208; Mature: 208

Protein sequence:

>208_residues
MLWSFIAVCFSAWLYVDASYRGPAWRRWVFKPVTLILLLLLAWQAPMFNAISYLVLAGLCASLLGDALTLLPRQRVMYAV
GAFFLSHLLYTIWFASQLTLSFFWPLPLVLLVFGALLMAVIWSRLEEMKMPVLTFIGMTLVMVWLAGELWFARPTNTPLS
GFAGAALLLLSNAVWLVSHYRRRFRADNAIAAAFYFAGHFLIVRALYL

Sequences:

>Translated_208_residues
MLWSFIAVCFSAWLYVDASYRGPAWRRWVFKPVTLILLLLLAWQAPMFNAISYLVLAGLCASLLGDALTLLPRQRVMYAV
GAFFLSHLLYTIWFASQLTLSFFWPLPLVLLVFGALLMAVIWSRLEEMKMPVLTFIGMTLVMVWLAGELWFARPTNTPLS
GFAGAALLLLSNAVWLVSHYRRRFRADNAIAAAFYFAGHFLIVRALYL
>Mature_208_residues
MLWSFIAVCFSAWLYVDASYRGPAWRRWVFKPVTLILLLLLAWQAPMFNAISYLVLAGLCASLLGDALTLLPRQRVMYAV
GAFFLSHLLYTIWFASQLTLSFFWPLPLVLLVFGALLMAVIWSRLEEMKMPVLTFIGMTLVMVWLAGELWFARPTNTPLS
GFAGAALLLLSNAVWLVSHYRRRFRADNAIAAAFYFAGHFLIVRALYL

Specific function: Unknown

COG id: COG3714

COG function: function code S; Predicted membrane protein

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the TMEM86 family [H]

Homologues:

Organism=Escherichia coli, GI1789878, Length=208, Percent_Identity=84.1346153846154, Blast_Score=306, Evalue=9e-85,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR012506 [H]

Pfam domain/function: PF07947 YhhN [H]

EC number: NA

Molecular weight: Translated: 23665; Mature: 23665

Theoretical pI: Translated: 10.23; Mature: 10.23

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
3.8 %Met     (Translated Protein)
4.8 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
3.8 %Met     (Mature Protein)
4.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLWSFIAVCFSAWLYVDASYRGPAWRRWVFKPVTLILLLLLAWQAPMFNAISYLVLAGLC
CHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHH
ASLLGDALTLLPRQRVMYAVGAFFLSHLLYTIWFASQLTLSFFWPLPLVLLVFGALLMAV
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
IWSRLEEMKMPVLTFIGMTLVMVWLAGELWFARPTNTPLSGFAGAALLLLSNAVWLVSHY
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHH
RRRFRADNAIAAAFYFAGHFLIVRALYL
HHHHCCCHHHHHHHHHHHHHHHHHHHHC
>Mature Secondary Structure
MLWSFIAVCFSAWLYVDASYRGPAWRRWVFKPVTLILLLLLAWQAPMFNAISYLVLAGLC
CHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHH
ASLLGDALTLLPRQRVMYAVGAFFLSHLLYTIWFASQLTLSFFWPLPLVLLVFGALLMAV
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
IWSRLEEMKMPVLTFIGMTLVMVWLAGELWFARPTNTPLSGFAGAALLLLSNAVWLVSHY
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHH
RRRFRADNAIAAAFYFAGHFLIVRALYL
HHHHCCCHHHHHHHHHHHHHHHHHHHHC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]