Click here to switch to the map view.

The map label for this gene is tusC [H]

Identifier: 238896826

GI number: 238896826

Start: 4791339

End: 4791698

Strand: Reverse

Name: tusC [H]

Synonym: KP1_5056

Alternate gene names: 238896826

Gene position: 4791698-4791339 (Counterclockwise)

Preceding gene: 238896827

Following gene: 238896825

Centisome position: 91.3

GC content: 59.72

Gene sequence:

>360_bases
ATGAAACGTGTGGCTTTTGTATTTTCCTCTGCGCCGCACGGCAGCGCCGCCGGCAGGGAAGGCCTCGATGCCTTATTAGC
AACCTCCGCGCTCACCGACGATATTGGCGTGTTTTTTGTGGGCGACGGCGTGTTTCAGCTCTTACCCGAACAGCGGCCTG
GCGCTGTGCTGGCCCGCGACTACATCGCTACCTTTAAATTGCTGTCGCTATATGATATCGACCAGTGCTGGCTGTGCGCC
GACTCAGCGCGAGAGCGCGGCCTGGATCCCGCGACCCCGTGGGTGGTGGATGTCGAATGCCTGGCGCCGGATGCCCTGCG
CGCCCGTCTGCATGAATATGATGTGATTTTGCGTTTCTGA

Upstream 100 bases:

>100_bases
TCGCTCTGCCTGGCCACAATTTGCAGCCGGGTTTTACCTTGAGCGGGCTCGGCGCGCTAGCGGAAGCGGCGCTTACTTGC
GATCGGATGGTGCAGTTCTG

Downstream 100 bases:

>100_bases
GGCCCCCATGCTCCATACGCTCAGTGTTTCCCCCTGGCATGCCGACATCGCAGCGATGCTTCGTTTGATGGAGCACGGCG
ACGATCTGGTACTACTGTCT

Product: sulfur relay protein TusC

Products: NA

Alternate protein names: tRNA 2-thiouridine synthesizing protein C [H]

Number of amino acids: Translated: 119; Mature: 119

Protein sequence:

>119_residues
MKRVAFVFSSAPHGSAAGREGLDALLATSALTDDIGVFFVGDGVFQLLPEQRPGAVLARDYIATFKLLSLYDIDQCWLCA
DSARERGLDPATPWVVDVECLAPDALRARLHEYDVILRF

Sequences:

>Translated_119_residues
MKRVAFVFSSAPHGSAAGREGLDALLATSALTDDIGVFFVGDGVFQLLPEQRPGAVLARDYIATFKLLSLYDIDQCWLCA
DSARERGLDPATPWVVDVECLAPDALRARLHEYDVILRF
>Mature_119_residues
MKRVAFVFSSAPHGSAAGREGLDALLATSALTDDIGVFFVGDGVFQLLPEQRPGAVLARDYIATFKLLSLYDIDQCWLCA
DSARERGLDPATPWVVDVECLAPDALRARLHEYDVILRF

Specific function: Part of a sulfur-relay system required for 2-thiolation of 5-methylaminomethyl-2-thiouridine (mnm(5)s(2)U) at tRNA wobble positions [H]

COG id: COG2923

COG function: function code P; Uncharacterized protein involved in the oxidation of intracellular sulfur

Gene ontology:

Cell location: Cytoplasm [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the dsrF/tusC family [H]

Homologues:

Organism=Escherichia coli, GI1789742, Length=119, Percent_Identity=77.3109243697479, Blast_Score=188, Evalue=8e-50,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003787
- InterPro:   IPR017462 [H]

Pfam domain/function: PF02635 DrsE [H]

EC number: NA

Molecular weight: Translated: 13056; Mature: 13056

Theoretical pI: Translated: 4.49; Mature: 4.49

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.5 %Cys     (Translated Protein)
0.8 %Met     (Translated Protein)
3.4 %Cys+Met (Translated Protein)
2.5 %Cys     (Mature Protein)
0.8 %Met     (Mature Protein)
3.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKRVAFVFSSAPHGSAAGREGLDALLATSALTDDIGVFFVGDGVFQLLPEQRPGAVLARD
CCEEEEEEECCCCCCCCCHHHHHHHHHHHHCCCCCEEEEECCCHHEECCCCCCCCHHHHH
YIATFKLLSLYDIDQCWLCADSARERGLDPATPWVVDVECLAPDALRARLHEYDVILRF
HHHHHHHHHHCCCCHHEEECCHHHHCCCCCCCCEEEEEHCCCCHHHHHHHHHHEEEEEC
>Mature Secondary Structure
MKRVAFVFSSAPHGSAAGREGLDALLATSALTDDIGVFFVGDGVFQLLPEQRPGAVLARD
CCEEEEEEECCCCCCCCCHHHHHHHHHHHHCCCCCEEEEECCCHHEECCCCCCCCHHHHH
YIATFKLLSLYDIDQCWLCADSARERGLDPATPWVVDVECLAPDALRARLHEYDVILRF
HHHHHHHHHHCCCCHHEEECCHHHHCCCCCCCCEEEEEHCCCCHHHHHHHHHHEEEEEC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA