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The map label for this gene is rng [H]

Identifier: 238896752

GI number: 238896752

Start: 4732948

End: 4734417

Strand: Reverse

Name: rng [H]

Synonym: KP1_4971

Alternate gene names: 238896752

Gene position: 4734417-4732948 (Counterclockwise)

Preceding gene: 238896753

Following gene: 238896751

Centisome position: 90.2

GC content: 54.9

Gene sequence:

>1470_bases
ATGACGGCTGAATTATTAGTTAACGTAACGCCATCCGAAACGCGCGTTGCGTATATTGATGGCGGTATTCTGCAGGAAAT
CCATATTGAGCGTGAAGCGCGACGCGGAATAGTAGGCAATATCTACAAAGGTCGTGTTAGCCGAGTGCTGCCGGGAATGC
AGGCGGCTTTTGTAGATATTGGTCTGGATAAGGCGGCGTTCCTTCACGCCTCCGATATCATGCCGCATACCGAGTGCGTC
GCCGGTGAGGAGCAAAAGCAGTTTACCGTGCGCGATATTTCGGAGCTGGTGCGCCAGGGCCAGGACCTGATGGTCCAGGT
GGTTAAAGATCCGCTGGGTACCAAAGGCGCGCGTCTGACCACCGATATTACCCTGCCTTCCCGCTATCTGGTCTTTATGC
CAGGCGCCTCCCACGTGGGGGTCTCTCAGCGGATTGAAAGCGAAGCCGAGCGCGAGCGCCTAAAAAAGGTCGTCGCAGAA
TATTGCGATGAGCAGGGCGGGTTTATCATTCGCACCGCTGCGGAAGGCGTTCACGAGCAGGAGATGGCCGCCGATGCCGC
TTATCTTAAGCGCGTATGGACCAAGGTGATGGAGCGCAAAAAGCGCAACCAGACCCGCTATCAGCTGTATGGCGAGCTGG
CTCTGGCCCAGCGCGTGCTGCGTGATTTTGCCGATGCGCAACTGGATCGCATTCGCGTCGACTCGCGCCTGACCTATGAG
GCGTTGCTCGAATTCACCGCCGAATATATCCCGGAAATGACCAGCAAGCTGGAACACTACAGCGGCCGTCAGCCGATATT
CGATCTCTTTGACGTTGAGAACGAAATTCAGCGCGCGCTGGAGCGTAAAGTCGAGCTCAAATCCGGGGGCTATCTGATCA
TCGACCAGACCGAGGCGATGACCACCATCGATATCAACACCGGGGCCTTTGTCGGGCACCGCAATCTTGACGATACGATC
TTCAATACCAACATCGAAGCCACCCAGGCGATAGCCCGCCAGCTACGTTTGCGTAATCTCGGCGGCATTATCATCATTGA
TTTCATTGACATGAACAATGAAGATCACCGTCGACGGGTGTTGCACTCTTTAGAGCAGGCGCTGAGTAAAGATCGGGTGA
AGACCAGCATTAACGGCTTCTCCCAGCTGGGCCTGGTGGAGATGACCCGTAAACGCACCCGTGAAAGCGTGGAGCATGTG
CTGTGCAACGAGTGCCCAACCTGCCACGGACGTGGAACGGTAAAGTCGGTGGAAACGGTGTGCTATGAGATTATGCGTGA
GATCGTCCGCGTACATCATGCTTATGATTCCGATCGCTTCCTGGTCTATGCTTCCCCTGCGGTGGCGGAAACCCTGAAAG
GGGAAGAGTCGCATGCGCTGGCGGAAGTGGAAATCTTTGTCGGCAAGCAGGTGAAGGTACAAATTGAGCCGCTCTATAAT
CAAGAGCAGTTCGATGTGGTTATGATGTAA

Upstream 100 bases:

>100_bases
AGATTAATGGCAGCTATCACGCCGTAGTCGGCTTACCGCTGGTGGAAACGTATGAGTTGCTCAGTAACTTTAACTCACTG
CGTAAAGGAAAGGGATAAAG

Downstream 100 bases:

>100_bases
GACACCGCGTCATTGTGCGGCTGACAAGGAGAGAGGCGTGAGGCGACTGCCCGGGATTTTATTGCTCACCGTGGCAACAT
TGATTGTTATCGTCGCGCTG

Product: ribonuclease G

Products: NA

Alternate protein names: RNase G; Cytoplasmic axial filament protein [H]

Number of amino acids: Translated: 489; Mature: 488

Protein sequence:

>489_residues
MTAELLVNVTPSETRVAYIDGGILQEIHIEREARRGIVGNIYKGRVSRVLPGMQAAFVDIGLDKAAFLHASDIMPHTECV
AGEEQKQFTVRDISELVRQGQDLMVQVVKDPLGTKGARLTTDITLPSRYLVFMPGASHVGVSQRIESEAERERLKKVVAE
YCDEQGGFIIRTAAEGVHEQEMAADAAYLKRVWTKVMERKKRNQTRYQLYGELALAQRVLRDFADAQLDRIRVDSRLTYE
ALLEFTAEYIPEMTSKLEHYSGRQPIFDLFDVENEIQRALERKVELKSGGYLIIDQTEAMTTIDINTGAFVGHRNLDDTI
FNTNIEATQAIARQLRLRNLGGIIIIDFIDMNNEDHRRRVLHSLEQALSKDRVKTSINGFSQLGLVEMTRKRTRESVEHV
LCNECPTCHGRGTVKSVETVCYEIMREIVRVHHAYDSDRFLVYASPAVAETLKGEESHALAEVEIFVGKQVKVQIEPLYN
QEQFDVVMM

Sequences:

>Translated_489_residues
MTAELLVNVTPSETRVAYIDGGILQEIHIEREARRGIVGNIYKGRVSRVLPGMQAAFVDIGLDKAAFLHASDIMPHTECV
AGEEQKQFTVRDISELVRQGQDLMVQVVKDPLGTKGARLTTDITLPSRYLVFMPGASHVGVSQRIESEAERERLKKVVAE
YCDEQGGFIIRTAAEGVHEQEMAADAAYLKRVWTKVMERKKRNQTRYQLYGELALAQRVLRDFADAQLDRIRVDSRLTYE
ALLEFTAEYIPEMTSKLEHYSGRQPIFDLFDVENEIQRALERKVELKSGGYLIIDQTEAMTTIDINTGAFVGHRNLDDTI
FNTNIEATQAIARQLRLRNLGGIIIIDFIDMNNEDHRRRVLHSLEQALSKDRVKTSINGFSQLGLVEMTRKRTRESVEHV
LCNECPTCHGRGTVKSVETVCYEIMREIVRVHHAYDSDRFLVYASPAVAETLKGEESHALAEVEIFVGKQVKVQIEPLYN
QEQFDVVMM
>Mature_488_residues
TAELLVNVTPSETRVAYIDGGILQEIHIEREARRGIVGNIYKGRVSRVLPGMQAAFVDIGLDKAAFLHASDIMPHTECVA
GEEQKQFTVRDISELVRQGQDLMVQVVKDPLGTKGARLTTDITLPSRYLVFMPGASHVGVSQRIESEAERERLKKVVAEY
CDEQGGFIIRTAAEGVHEQEMAADAAYLKRVWTKVMERKKRNQTRYQLYGELALAQRVLRDFADAQLDRIRVDSRLTYEA
LLEFTAEYIPEMTSKLEHYSGRQPIFDLFDVENEIQRALERKVELKSGGYLIIDQTEAMTTIDINTGAFVGHRNLDDTIF
NTNIEATQAIARQLRLRNLGGIIIIDFIDMNNEDHRRRVLHSLEQALSKDRVKTSINGFSQLGLVEMTRKRTRESVEHVL
CNECPTCHGRGTVKSVETVCYEIMREIVRVHHAYDSDRFLVYASPAVAETLKGEESHALAEVEIFVGKQVKVQIEPLYNQ
EQFDVVMM

Specific function: Involved in the processing of the 5'-end of 16S rRNA. Could be involved in chromosome segregation and cell division. It may be one of the components of the cytoplasmic axial filaments bundles or merely regulate the formation of this structure [H]

COG id: COG1530

COG function: function code J; Ribonucleases G and E

Gene ontology:

Cell location: Cytoplasm, cytoskeleton [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 S1 motif domain [H]

Homologues:

Organism=Escherichia coli, GI87082235, Length=489, Percent_Identity=96.7280163599182, Blast_Score=956, Evalue=0.0,
Organism=Escherichia coli, GI1787325, Length=436, Percent_Identity=35.7798165137615, Blast_Score=268, Evalue=5e-73,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR012340
- InterPro:   IPR016027
- InterPro:   IPR003029
- InterPro:   IPR019307
- InterPro:   IPR022967
- InterPro:   IPR004659 [H]

Pfam domain/function: PF10150 RNase_E_G; PF00575 S1 [H]

EC number: 3.1.4.- [C]

Molecular weight: Translated: 55545; Mature: 55414

Theoretical pI: Translated: 5.92; Mature: 5.92

Prosite motif: PS50126 S1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
2.9 %Met     (Translated Protein)
4.1 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
2.7 %Met     (Mature Protein)
3.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTAELLVNVTPSETRVAYIDGGILQEIHIEREARRGIVGNIYKGRVSRVLPGMQAAFVDI
CCCEEEEEECCCCCEEEEECCCHHHHHHHHHHHHCCCCCCHHHHHHHHHCCCCHHHHHCC
GLDKAAFLHASDIMPHTECVAGEEQKQFTVRDISELVRQGQDLMVQVVKDPLGTKGARLT
CCCHHHHEEHHCCCCCHHHHCCCHHHCCHHHHHHHHHHCCHHHHHHHHHCCCCCCCCEEE
TDITLPSRYLVFMPGASHVGVSQRIESEAERERLKKVVAEYCDEQGGFIIRTAAEGVHEQ
EEEECCCCEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEECCCCCHHH
EMAADAAYLKRVWTKVMERKKRNQTRYQLYGELALAQRVLRDFADAQLDRIRVDSRLTYE
HHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHH
ALLEFTAEYIPEMTSKLEHYSGRQPIFDLFDVENEIQRALERKVELKSGGYLIIDQTEAM
HHHHHHHHHHHHHHHHHHHCCCCCCCHHHHCCHHHHHHHHHHHHEECCCCEEEEECCCCE
TTIDINTGAFVGHRNLDDTIFNTNIEATQAIARQLRLRNLGGIIIIDFIDMNNEDHRRRV
EEEEECCCCEEECCCCCCCCCCCCCHHHHHHHHHHHHHCCCCEEEEEEEECCCCHHHHHH
LHSLEQALSKDRVKTSINGFSQLGLVEMTRKRTRESVEHVLCNECPTCHGRGTVKSVETV
HHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHH
CYEIMREIVRVHHAYDSDRFLVYASPAVAETLKGEESHALAEVEIFVGKQVKVQIEPLYN
HHHHHHHHHHHHHCCCCCCEEEEECCHHHHHHCCCCCCCEEEEEEEECCEEEEEEEECCC
QEQFDVVMM
CCCCEEEEC
>Mature Secondary Structure 
TAELLVNVTPSETRVAYIDGGILQEIHIEREARRGIVGNIYKGRVSRVLPGMQAAFVDI
CCEEEEEECCCCCEEEEECCCHHHHHHHHHHHHCCCCCCHHHHHHHHHCCCCHHHHHCC
GLDKAAFLHASDIMPHTECVAGEEQKQFTVRDISELVRQGQDLMVQVVKDPLGTKGARLT
CCCHHHHEEHHCCCCCHHHHCCCHHHCCHHHHHHHHHHCCHHHHHHHHHCCCCCCCCEEE
TDITLPSRYLVFMPGASHVGVSQRIESEAERERLKKVVAEYCDEQGGFIIRTAAEGVHEQ
EEEECCCCEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEECCCCCHHH
EMAADAAYLKRVWTKVMERKKRNQTRYQLYGELALAQRVLRDFADAQLDRIRVDSRLTYE
HHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHH
ALLEFTAEYIPEMTSKLEHYSGRQPIFDLFDVENEIQRALERKVELKSGGYLIIDQTEAM
HHHHHHHHHHHHHHHHHHHCCCCCCCHHHHCCHHHHHHHHHHHHEECCCCEEEEECCCCE
TTIDINTGAFVGHRNLDDTIFNTNIEATQAIARQLRLRNLGGIIIIDFIDMNNEDHRRRV
EEEEECCCCEEECCCCCCCCCCCCCHHHHHHHHHHHHHCCCCEEEEEEEECCCCHHHHHH
LHSLEQALSKDRVKTSINGFSQLGLVEMTRKRTRESVEHVLCNECPTCHGRGTVKSVETV
HHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHH
CYEIMREIVRVHHAYDSDRFLVYASPAVAETLKGEESHALAEVEIFVGKQVKVQIEPLYN
HHHHHHHHHHHHHCCCCCCEEEEECCHHHHHHCCCCCCCEEEEEEEECCEEEEEEEECCC
QEQFDVVMM
CCCCEEEEC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]