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The map label for this gene is yhbH [C]

Identifier: 238896710

GI number: 238896710

Start: 4686096

End: 4686383

Strand: Direct

Name: yhbH [C]

Synonym: KP1_4925

Alternate gene names: 238896710

Gene position: 4686096-4686383 (Clockwise)

Preceding gene: 238896709

Following gene: 238896711

Centisome position: 89.28

GC content: 46.53

Gene sequence:

>288_bases
ATGCAGCTCAACATTACAGGACACAACGTCGAAATTACGCCTGCGATGCGCGAATTCGTTACGGCGAAGTTCAGCAAGCT
GGAGCAATTTTTCGACCGGATCAATCAGGTCTATATTGTGTTAAAAGTAGAGAAAGTGACGCAAATTGCGGACGCGAATC
TGCATGTCAACGGTGGCGAAATCCATGCCAGTGCGGAAGGGCAGGATATGTATGCGGCTGTCGATGGTCTTATCGACAAG
CTGGCAAGACAGTTAACGAAGCACAAAGATAAACTAAAACAACACTAA

Upstream 100 bases:

>100_bases
GTGGCGCGCCGCACTGTCGCGAAGTACAGAGAGTCTTTATCCATCCCGCCGTCAAACCAGCGTAAACAACTGGTCTGACA
TAACCGATAAGGAAGACACT

Downstream 100 bases:

>100_bases
TTGTCCGGGCCCCCTTGCGCCCGCCGCTGGATATCATCGGCGACGGGCGCGGGGGCGCTCAGGTGAAATTATGATGAACA
ACGATTCGGCTCTACAACTG

Product: putative sigma(54) modulation protein

Products: NA

Alternate protein names: ORF95 [H]

Number of amino acids: Translated: 95; Mature: 95

Protein sequence:

>95_residues
MQLNITGHNVEITPAMREFVTAKFSKLEQFFDRINQVYIVLKVEKVTQIADANLHVNGGEIHASAEGQDMYAAVDGLIDK
LARQLTKHKDKLKQH

Sequences:

>Translated_95_residues
MQLNITGHNVEITPAMREFVTAKFSKLEQFFDRINQVYIVLKVEKVTQIADANLHVNGGEIHASAEGQDMYAAVDGLIDK
LARQLTKHKDKLKQH
>Mature_95_residues
MQLNITGHNVEITPAMREFVTAKFSKLEQFFDRINQVYIVLKVEKVTQIADANLHVNGGEIHASAEGQDMYAAVDGLIDK
LARQLTKHKDKLKQH

Specific function: Probably modulates the activity of sigma(54) (rpoN) [H]

COG id: COG1544

COG function: function code J; Ribosome-associated protein Y (PSrp-1)

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the sigma(54) modulation protein family [H]

Homologues:

Organism=Escherichia coli, GI1789595, Length=95, Percent_Identity=88.4210526315789, Blast_Score=177, Evalue=1e-46,
Organism=Escherichia coli, GI1788949, Length=87, Percent_Identity=40.2298850574713, Blast_Score=69, Evalue=6e-14,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003489 [H]

Pfam domain/function: PF02482 Ribosomal_S30AE [H]

EC number: NA

Molecular weight: Translated: 10760; Mature: 10760

Theoretical pI: Translated: 7.91; Mature: 7.91

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.2 %Met     (Translated Protein)
3.2 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.2 %Met     (Mature Protein)
3.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQLNITGHNVEITPAMREFVTAKFSKLEQFFDRINQVYIVLKVEKVTQIADANLHVNGGE
CEEECCCCCEEECHHHHHHHHHHHHHHHHHHHHHHHEEEEEEEHHHHHHHCCCEEECCCE
IHASAEGQDMYAAVDGLIDKLARQLTKHKDKLKQH
EEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MQLNITGHNVEITPAMREFVTAKFSKLEQFFDRINQVYIVLKVEKVTQIADANLHVNGGE
CEEECCCCCEEECHHHHHHHHHHHHHHHHHHHHHHHEEEEEEEHHHHHHHCCCEEECCCE
IHASAEGQDMYAAVDGLIDKLARQLTKHKDKLKQH
EEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 2695747; 2999700 [H]