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The map label for this gene is yhbO [H]

Identifier: 238896660

GI number: 238896660

Start: 4638894

End: 4639559

Strand: Direct

Name: yhbO [H]

Synonym: KP1_4867

Alternate gene names: 238896660

Gene position: 4638894-4639559 (Clockwise)

Preceding gene: 238896657

Following gene: 238896662

Centisome position: 88.38

GC content: 55.56

Gene sequence:

>666_bases
TTGGTTCTCCTTTACAGAATTCTCCGCCTTGCACTTTCGGGCTCATGTTCCAGGCTTAATACCTTACAAGGTAAGTATCC
ACCATCATCATGGAATTACCTCATTGACCATCCAGACAGTGGAGGAAGCATGAGTAAAAAGATAGCCGTCCTCATTACCG
ACGACTTTGAAGATTCTGAATTTACCTCTCCCGCCGAAGCCTTTAAGCTCGCCGGGCATCAGGTCATCACGATCGAAAAG
CAGGCTGGCAAAACGGTGAAGGGTAAGCAGGGAGAAGCCGAGGTCGCCATCGACAGAGCCATCGATGACGTCACACCGGG
TGAATTTGATGCCTTATTGCTGCCCGGGGGCTACTCTCCCGACCAGCTGCGTGGTGATGAACGCTTCGTCACCTTTACCC
GCGATTTTGTCAACGGCGGTAAGCCGGTGTTTGCCATCTGCCACGGCCCGCAGCTGCTGATCAGCGCCGATGTGATCCGC
GGACGTAAGCTCACGGCGGTGAAACCGATTGTGGTGGATGTGAAAAACGCCGGGGGCGAGTTTTACGACCAGGAGGTGGT
GGTCGATAACGAACAGCTGGTCACCAGCAGAACGCCGGACGATCTGCCGGCCTTCAATCGCGAAGCGCTACGCCTGCTCG
GCGCCGGCATCACGCCGCCAGTGTAA

Upstream 100 bases:

>100_bases
GTCGGCGCGGCGATGGTGCTTATACGGGGCTCATTCTGCAGCAGCCGGAGTAAGTGACCGCCAACTAACCCGGTCGCGCC
GGTTAATAATACCTGACTCA

Downstream 100 bases:

>100_bases
TTTTTTCCCGAAACCCAGCGTGTTGTCGGTAAATTTGATTTCGTCCGGACGAATCTCCCATACCGGCGCCGACAGCATGC
GGGCCACCGGGAAGCGCTTG

Product: putative intracellular proteinase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 221; Mature: 221

Protein sequence:

>221_residues
MVLLYRILRLALSGSCSRLNTLQGKYPPSSWNYLIDHPDSGGSMSKKIAVLITDDFEDSEFTSPAEAFKLAGHQVITIEK
QAGKTVKGKQGEAEVAIDRAIDDVTPGEFDALLLPGGYSPDQLRGDERFVTFTRDFVNGGKPVFAICHGPQLLISADVIR
GRKLTAVKPIVVDVKNAGGEFYDQEVVVDNEQLVTSRTPDDLPAFNREALRLLGAGITPPV

Sequences:

>Translated_221_residues
MVLLYRILRLALSGSCSRLNTLQGKYPPSSWNYLIDHPDSGGSMSKKIAVLITDDFEDSEFTSPAEAFKLAGHQVITIEK
QAGKTVKGKQGEAEVAIDRAIDDVTPGEFDALLLPGGYSPDQLRGDERFVTFTRDFVNGGKPVFAICHGPQLLISADVIR
GRKLTAVKPIVVDVKNAGGEFYDQEVVVDNEQLVTSRTPDDLPAFNREALRLLGAGITPPV
>Mature_221_residues
MVLLYRILRLALSGSCSRLNTLQGKYPPSSWNYLIDHPDSGGSMSKKIAVLITDDFEDSEFTSPAEAFKLAGHQVITIEK
QAGKTVKGKQGEAEVAIDRAIDDVTPGEFDALLLPGGYSPDQLRGDERFVTFTRDFVNGGKPVFAICHGPQLLISADVIR
GRKLTAVKPIVVDVKNAGGEFYDQEVVVDNEQLVTSRTPDDLPAFNREALRLLGAGITPPV

Specific function: Unknown

COG id: COG0693

COG function: function code R; Putative intracellular protease/amidase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 PfpI endopeptidase domain [H]

Homologues:

Organism=Escherichia coli, GI87082219, Length=172, Percent_Identity=87.2093023255814, Blast_Score=311, Evalue=3e-86,
Organism=Drosophila melanogaster, GI28571932, Length=160, Percent_Identity=29.375, Blast_Score=64, Evalue=9e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006286
- InterPro:   IPR002818 [H]

Pfam domain/function: PF01965 DJ-1_PfpI [H]

EC number: NA

Molecular weight: Translated: 24014; Mature: 24014

Theoretical pI: Translated: 4.94; Mature: 4.94

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
0.9 %Met     (Translated Protein)
1.8 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
0.9 %Met     (Mature Protein)
1.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVLLYRILRLALSGSCSRLNTLQGKYPPSSWNYLIDHPDSGGSMSKKIAVLITDDFEDSE
CHHHHHHHHHHHCCCCCHHHHCCCCCCCCCCCEEEECCCCCCCCCCEEEEEEECCCCCCC
FTSPAEAFKLAGHQVITIEKQAGKTVKGKQGEAEVAIDRAIDDVTPGEFDALLLPGGYSP
CCCHHHHHHHCCCEEEEEECCCCCCCCCCCCCCEEEEEHHHCCCCCCCCCEEEECCCCCH
DQLRGDERFVTFTRDFVNGGKPVFAICHGPQLLISADVIRGRKLTAVKPIVVDVKNAGGE
HHCCCCCEEEEEEHHHHCCCCEEEEEECCCEEEEEECHHCCCEEEEECEEEEEEECCCCC
FYDQEVVVDNEQLVTSRTPDDLPAFNREALRLLGAGITPPV
CCCCEEEECCCEEEECCCCCCCCCCCHHHHHHHCCCCCCCC
>Mature Secondary Structure
MVLLYRILRLALSGSCSRLNTLQGKYPPSSWNYLIDHPDSGGSMSKKIAVLITDDFEDSE
CHHHHHHHHHHHCCCCCHHHHCCCCCCCCCCCEEEECCCCCCCCCCEEEEEEECCCCCCC
FTSPAEAFKLAGHQVITIEKQAGKTVKGKQGEAEVAIDRAIDDVTPGEFDALLLPGGYSP
CCCHHHHHHHCCCEEEEEECCCCCCCCCCCCCCEEEEEHHHCCCCCCCCCEEEECCCCCH
DQLRGDERFVTFTRDFVNGGKPVFAICHGPQLLISADVIRGRKLTAVKPIVVDVKNAGGE
HHCCCCCEEEEEEHHHHCCCCEEEEEECCCEEEEEECHHCCCEEEEECEEEEEEECCCCC
FYDQEVVVDNEQLVTSRTPDDLPAFNREALRLLGAGITPPV
CCCCEEEECCCEEEECCCCCCCCCCCHHHHHHHCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9278503 [H]