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The map label for this gene is yraN [C]

Identifier: 238896655

GI number: 238896655

Start: 4635422

End: 4635808

Strand: Direct

Name: yraN [C]

Synonym: KP1_4861

Alternate gene names: 238896655

Gene position: 4635422-4635808 (Clockwise)

Preceding gene: 238896654

Following gene: 238896656

Centisome position: 88.32

GC content: 57.62

Gene sequence:

>387_bases
ATGGCTCAAGTACCAGCAGGGAAAAATCGTTCCGGCCAGCTAAGCAAACAGACCGGCGATGCCTGGGAAAACCAGGCTCG
CCGCTGGCTGGAAGGCCAGGGCCTGCGTTTTATCGCCGCCAATGCCCGCGAGCGTGGCGGCGAAATTGACCTTATCATGC
GCGACGGCACGGTCACCGTTTTTATCGAAGTGCGCTACCGCCGTAGCGCCCGGTACGGTGATGCGGCAGCCAGCGTCACT
CCGCAAAAACAACAACGACTGCTTAAAGCCGCCCGTTTGTGGCTCTGCCGACAGAATGGGAGCTTTGAGACTGTGGATTG
CCGTTTCGATGTGGTAGCCTTCACCGGAAACGACATCCAATGGCTAAAAAACGCCTTTGGCGAATAG

Upstream 100 bases:

>100_bases
ATCACTTCACGCAAATGCGCCAGACGCCTGGCTTCGAGCTGAACGGCAATACCGGCGATCTGACGGCCAACCAGGATTGC
GTGATTAACAGGAAACTGTC

Downstream 100 bases:

>100_bases
CGTAATACCAGAAGTAAGGGATCCCGTGCTCGACAGAATCAAAGCCTGCTTTACCGAAAGCATTCAAACCCAAATTGCCG
CAGCGGAAGCACTCCCGGAC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 128; Mature: 127

Protein sequence:

>128_residues
MAQVPAGKNRSGQLSKQTGDAWENQARRWLEGQGLRFIAANARERGGEIDLIMRDGTVTVFIEVRYRRSARYGDAAASVT
PQKQQRLLKAARLWLCRQNGSFETVDCRFDVVAFTGNDIQWLKNAFGE

Sequences:

>Translated_128_residues
MAQVPAGKNRSGQLSKQTGDAWENQARRWLEGQGLRFIAANARERGGEIDLIMRDGTVTVFIEVRYRRSARYGDAAASVT
PQKQQRLLKAARLWLCRQNGSFETVDCRFDVVAFTGNDIQWLKNAFGE
>Mature_127_residues
AQVPAGKNRSGQLSKQTGDAWENQARRWLEGQGLRFIAANARERGGEIDLIMRDGTVTVFIEVRYRRSARYGDAAASVTP
QKQQRLLKAARLWLCRQNGSFETVDCRFDVVAFTGNDIQWLKNAFGE

Specific function: Unknown

COG id: COG0792

COG function: function code L; Predicted endonuclease distantly related to archaeal Holliday junction resolvase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0102 family

Homologues:

Organism=Escherichia coli, GI1789538, Length=129, Percent_Identity=71.3178294573643, Blast_Score=191, Evalue=9e-51,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): Y3527_KLEP7 (A6TEG7)

Other databases:

- EMBL:   CP000647
- RefSeq:   YP_001337218.1
- ProteinModelPortal:   A6TEG7
- STRING:   A6TEG7
- GeneID:   5340335
- GenomeReviews:   CP000647_GR
- KEGG:   kpn:KPN_03556
- eggNOG:   COG0792
- HOGENOM:   HBG710155
- OMA:   QWLKNAF
- ProtClustDB:   PRK12497
- HAMAP:   MF_00048
- InterPro:   IPR011856
- InterPro:   IPR011335
- InterPro:   IPR003509
- Gene3D:   G3DSA:3.40.1350.10
- TIGRFAMs:   TIGR00252

Pfam domain/function: PF02021 UPF0102; SSF52980 Restrict_endonuc_II-like_core

EC number: NA

Molecular weight: Translated: 14465; Mature: 14333

Theoretical pI: Translated: 10.44; Mature: 10.44

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.6 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
3.1 %Cys+Met (Translated Protein)
1.6 %Cys     (Mature Protein)
0.8 %Met     (Mature Protein)
2.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAQVPAGKNRSGQLSKQTGDAWENQARRWLEGQGLRFIAANARERGGEIDLIMRDGTVTV
CCCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCEEEEECCCCCCCCEEEEEEECCEEEE
FIEVRYRRSARYGDAAASVTPQKQQRLLKAARLWLCRQNGSFETVDCRFDVVAFTGNDIQ
EEEEEECCCCCCCCCCCCCCCHHHHHHHHHHHHEEECCCCCEEEEEEEEEEEEEECCCHH
WLKNAFGE
HHHHHCCC
>Mature Secondary Structure 
AQVPAGKNRSGQLSKQTGDAWENQARRWLEGQGLRFIAANARERGGEIDLIMRDGTVTV
CCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCEEEEECCCCCCCCEEEEEEECCEEEE
FIEVRYRRSARYGDAAASVTPQKQQRLLKAARLWLCRQNGSFETVDCRFDVVAFTGNDIQ
EEEEEECCCCCCCCCCCCCCCHHHHHHHHHHHHEEECCCCCEEEEEEEEEEEEEECCCHH
WLKNAFGE
HHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA