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The map label for this gene is ygiC [H]

Identifier: 238896545

GI number: 238896545

Start: 4524275

End: 4525435

Strand: Direct

Name: ygiC [H]

Synonym: KP1_4732

Alternate gene names: 238896545

Gene position: 4524275-4525435 (Clockwise)

Preceding gene: 238896544

Following gene: 238896547

Centisome position: 86.2

GC content: 56.93

Gene sequence:

>1161_bases
ATGGAAAGAGTCAGTATTACCGAGCGCCCGGACTGGCGCGAGAAAGCGACCGAGTACGGTTTCAACTTCCATACCATGTA
CGGCGAGCCCTACTGGAGCGAAGAGGCGTATTACAAGCTGACCCTCGCGCAGGTGGAAAAGCTGGAAGCGGTCACCGCTG
AGCTACATCAGATGTGCCTCCAGGTGGTGGAAAAAGTGATCGCCAGCGATGAGCTGATGACCAAATTCCGCATCCCTAAA
CACACCTGGGGTTTTGTGCGCCAGTCGTGGAAAACCAACCAGCCGTCGCTCTACTCACGTCTCGACCTGGCCTGGGATGG
CGTCGGCGAACCGAAGCTGCTGGAGAACAATGCCGACACCCCGACCTCGCTGTATGAAGCGGCCTTCTTCCAGTGGATCT
GGCTGGAAGATCAGCTCAACGCCGGCAAGCTGCCGGCGGGCAGCGACCAGTTCAACAGTTTGCAGGAAAAGCTGATCGAT
CGCTTCGGCGAGCTGCGCGAGCAGTTTGGCTTTCAGCTGCTGCATATGGCCTGCTGCCGCGATACCGTTGAAGATCGCGG
TACCGTGCAGTATCTGCAGGACTGCGCCGCTGAAGCGGGGCTGGCGACGGAATTCCTCTACGTTGAAGATATCGGCCTGG
GCGAAAAAGGCCAGTTTACCGATCTGCAGGATCAGGTGATTGGCAATCTGTTCAAGCTCTATCCGTGGGAGTTTATGCTG
CGGGAGATGTTCTCCACCAAGCTGGAAGACGCTGGCGTCCGCTGGCTGGAGCCGGCGTGGAAAAGCATTATCTCCAACAA
GGCGCTGCTGCCGATGCTGTGGGAGATGTTCCCCAATCACCCTAATCTGCTGGCGGCCTACTTCAGCGAAGATACTCACC
CGGAGATGGAGAAGTACGTCATTAAGCCAATCTTCTCCCGCGAAGGTGCTAACGTGTCGATCGTTGAAAATGGCAAAGTG
GTGGAGGCAGTAGAAGGCCCGTACGGGGAAGAAGGCACCATCGTGCAGGCGTTTTACCCGCTGCCGAAGTTTGGCGATAG
CTATACGCTGATTGGCAGCTGGCTCATCAACGACCAGCCTGCAGGGATCGGTATTCGCGAAGACCGGGCGCTGATCACCC
AGGATCTGTCGCGCTTCTATCCGCACATTTTCGTCGAATAA

Upstream 100 bases:

>100_bases
CCCGCGGCGGCTTTGGCGAGTCGGTAGCGAAACAGTCGACCATGCAGCGTAGCGCCGCAGGCTCAACGTCCTCTTCTCGC
TCAATGGGCGGCTAAGCAAC

Downstream 100 bases:

>100_bases
TGCCGCGCTCCGGCGACGGTAAATGCCGCCGGAGCGCGCTATCATCAGGCGCCAACCAACACCGACAGCATGCTCAGCGA
GCCCATCTCGATGCCATCGA

Product: putative glutathione-like synthetase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 386; Mature: 386

Protein sequence:

>386_residues
MERVSITERPDWREKATEYGFNFHTMYGEPYWSEEAYYKLTLAQVEKLEAVTAELHQMCLQVVEKVIASDELMTKFRIPK
HTWGFVRQSWKTNQPSLYSRLDLAWDGVGEPKLLENNADTPTSLYEAAFFQWIWLEDQLNAGKLPAGSDQFNSLQEKLID
RFGELREQFGFQLLHMACCRDTVEDRGTVQYLQDCAAEAGLATEFLYVEDIGLGEKGQFTDLQDQVIGNLFKLYPWEFML
REMFSTKLEDAGVRWLEPAWKSIISNKALLPMLWEMFPNHPNLLAAYFSEDTHPEMEKYVIKPIFSREGANVSIVENGKV
VEAVEGPYGEEGTIVQAFYPLPKFGDSYTLIGSWLINDQPAGIGIREDRALITQDLSRFYPHIFVE

Sequences:

>Translated_386_residues
MERVSITERPDWREKATEYGFNFHTMYGEPYWSEEAYYKLTLAQVEKLEAVTAELHQMCLQVVEKVIASDELMTKFRIPK
HTWGFVRQSWKTNQPSLYSRLDLAWDGVGEPKLLENNADTPTSLYEAAFFQWIWLEDQLNAGKLPAGSDQFNSLQEKLID
RFGELREQFGFQLLHMACCRDTVEDRGTVQYLQDCAAEAGLATEFLYVEDIGLGEKGQFTDLQDQVIGNLFKLYPWEFML
REMFSTKLEDAGVRWLEPAWKSIISNKALLPMLWEMFPNHPNLLAAYFSEDTHPEMEKYVIKPIFSREGANVSIVENGKV
VEAVEGPYGEEGTIVQAFYPLPKFGDSYTLIGSWLINDQPAGIGIREDRALITQDLSRFYPHIFVE
>Mature_386_residues
MERVSITERPDWREKATEYGFNFHTMYGEPYWSEEAYYKLTLAQVEKLEAVTAELHQMCLQVVEKVIASDELMTKFRIPK
HTWGFVRQSWKTNQPSLYSRLDLAWDGVGEPKLLENNADTPTSLYEAAFFQWIWLEDQLNAGKLPAGSDQFNSLQEKLID
RFGELREQFGFQLLHMACCRDTVEDRGTVQYLQDCAAEAGLATEFLYVEDIGLGEKGQFTDLQDQVIGNLFKLYPWEFML
REMFSTKLEDAGVRWLEPAWKSIISNKALLPMLWEMFPNHPNLLAAYFSEDTHPEMEKYVIKPIFSREGANVSIVENGKV
VEAVEGPYGEEGTIVQAFYPLPKFGDSYTLIGSWLINDQPAGIGIREDRALITQDLSRFYPHIFVE

Specific function: Unknown

COG id: COG0754

COG function: function code E; Glutathionylspermidine synthase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: To the N-terminal of E.coli gsp and to E.coli yjfC [H]

Homologues:

Organism=Escherichia coli, GI1789416, Length=386, Percent_Identity=90.1554404145078, Blast_Score=741, Evalue=0.0,
Organism=Escherichia coli, GI1790629, Length=389, Percent_Identity=51.6709511568123, Blast_Score=405, Evalue=1e-114,
Organism=Escherichia coli, GI1789361, Length=391, Percent_Identity=25.8312020460358, Blast_Score=135, Evalue=6e-33,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005494
- InterPro:   IPR016185 [H]

Pfam domain/function: PF03738 GSP_synth [H]

EC number: NA

Molecular weight: Translated: 44542; Mature: 44542

Theoretical pI: Translated: 4.41; Mature: 4.41

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
3.6 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
3.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MERVSITERPDWREKATEYGFNFHTMYGEPYWSEEAYYKLTLAQVEKLEAVTAELHQMCL
CCCCCCCCCCCHHHHHHHCCCEEEEECCCCCCCCCCEEEHHHHHHHHHHHHHHHHHHHHH
QVVEKVIASDELMTKFRIPKHTWGFVRQSWKTNQPSLYSRLDLAWDGVGEPKLLENNADT
HHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCCCCHHHHHHHHHCCCCCCCCEECCCCCC
PTSLYEAAFFQWIWLEDQLNAGKLPAGSDQFNSLQEKLIDRFGELREQFGFQLLHMACCR
HHHHHHHHHHHEEEEECCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
DTVEDRGTVQYLQDCAAEAGLATEFLYVEDIGLGEKGQFTDLQDQVIGNLFKLYPWEFML
HHHHCCHHHHHHHHHHHHCCCCEEEEEEEECCCCCCCCCCCHHHHHHHHHHHHCCHHHHH
REMFSTKLEDAGVRWLEPAWKSIISNKALLPMLWEMFPNHPNLLAAYFSEDTHPEMEKYV
HHHHHHHHHHCCCHHHHHHHHHHHCCCCHHHHHHHHCCCCCCEEEEECCCCCCHHHHHHH
IKPIFSREGANVSIVENGKVVEAVEGPYGEEGTIVQAFYPLPKFGDSYTLIGSWLINDQP
HHHHHCCCCCEEEEEECCCEEEECCCCCCCCCCEEEEECCCCCCCCCEEEEEEEEECCCC
AGIGIREDRALITQDLSRFYPHIFVE
CCCCCCCCHHHHHHHHHHHCCEEECC
>Mature Secondary Structure
MERVSITERPDWREKATEYGFNFHTMYGEPYWSEEAYYKLTLAQVEKLEAVTAELHQMCL
CCCCCCCCCCCHHHHHHHCCCEEEEECCCCCCCCCCEEEHHHHHHHHHHHHHHHHHHHHH
QVVEKVIASDELMTKFRIPKHTWGFVRQSWKTNQPSLYSRLDLAWDGVGEPKLLENNADT
HHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCCCCHHHHHHHHHCCCCCCCCEECCCCCC
PTSLYEAAFFQWIWLEDQLNAGKLPAGSDQFNSLQEKLIDRFGELREQFGFQLLHMACCR
HHHHHHHHHHHEEEEECCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
DTVEDRGTVQYLQDCAAEAGLATEFLYVEDIGLGEKGQFTDLQDQVIGNLFKLYPWEFML
HHHHCCHHHHHHHHHHHHCCCCEEEEEEEECCCCCCCCCCCHHHHHHHHHHHHCCHHHHH
REMFSTKLEDAGVRWLEPAWKSIISNKALLPMLWEMFPNHPNLLAAYFSEDTHPEMEKYV
HHHHHHHHHHCCCHHHHHHHHHHHCCCCHHHHHHHHCCCCCCEEEEECCCCCCHHHHHHH
IKPIFSREGANVSIVENGKVVEAVEGPYGEEGTIVQAFYPLPKFGDSYTLIGSWLINDQP
HHHHHCCCCCEEEEEECCCEEEECCCCCCCCCCEEEEECCCCCCCCCEEEEEEEEECCCC
AGIGIREDRALITQDLSRFYPHIFVE
CCCCCCCCHHHHHHHHHHHCCEEECC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]