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The map label for this gene is yggU [C]

Identifier: 238896484

GI number: 238896484

Start: 4464612

End: 4464902

Strand: Direct

Name: yggU [C]

Synonym: KP1_4664

Alternate gene names: 238896484

Gene position: 4464612-4464902 (Clockwise)

Preceding gene: 238896483

Following gene: 238896485

Centisome position: 85.06

GC content: 56.7

Gene sequence:

>291_bases
ATGAGTGCCGTTGAAACCTGCGCTGACGGGCTGGTGTTGAGGCTGTACATTCAGCCTAAGGCCAGCCGCGATAGCATCGT
GGGCGTACATGGCGACGAGCTTAAAGTCGCCATTACCGCCCCGCCCGTTGATGGCCAGGCCAATGCCCACCTGGTGAAAT
TTCTCGCCAAACAGTTCCGCGTCGCCAAAAGCCAGGTACTGATTGAAAAAGGCGAGCTGGGCCGCCATAAGCAAGTTAAA
ATCATCGCCCCACAACAGATCCCGACTGCGGTCGCGGCGCTAACTGAATAA

Upstream 100 bases:

>100_bases
CGATGGTGCTGGTACTGCTGTTGTACGTAATCAATATGGGCATCGCCGAAGTGCTGCAGGCCACCGGTAATGTACTGCTG
CCGGGGCAGTGGATGGCGCT

Downstream 100 bases:

>100_bases
ACAGGATTCATCATGCAAAAAGTCGTCCTCGCTACCGGTAACGCCGGCAAAGTGCGCGAACTGGCCTCGCTGCTGGAAGA
TTTTGGTCTCGATATCGTCG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 96; Mature: 95

Protein sequence:

>96_residues
MSAVETCADGLVLRLYIQPKASRDSIVGVHGDELKVAITAPPVDGQANAHLVKFLAKQFRVAKSQVLIEKGELGRHKQVK
IIAPQQIPTAVAALTE

Sequences:

>Translated_96_residues
MSAVETCADGLVLRLYIQPKASRDSIVGVHGDELKVAITAPPVDGQANAHLVKFLAKQFRVAKSQVLIEKGELGRHKQVK
IIAPQQIPTAVAALTE
>Mature_95_residues
SAVETCADGLVLRLYIQPKASRDSIVGVHGDELKVAITAPPVDGQANAHLVKFLAKQFRVAKSQVLIEKGELGRHKQVKI
IAPQQIPTAVAALTE

Specific function: Unknown

COG id: COG1872

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0235 family

Homologues:

Organism=Escherichia coli, GI87082189, Length=94, Percent_Identity=84.0425531914894, Blast_Score=164, Evalue=1e-42,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): Y3323_KLEP7 (A6TDW3)

Other databases:

- EMBL:   CP000647
- RefSeq:   YP_001337014.1
- ProteinModelPortal:   A6TDW3
- SMR:   A6TDW3
- STRING:   A6TDW3
- GeneID:   5340017
- GenomeReviews:   CP000647_GR
- KEGG:   kpn:KPN_03387
- eggNOG:   COG1872
- HOGENOM:   HBG472132
- OMA:   KASRDKI
- ProtClustDB:   PRK05090
- HAMAP:   MF_00634
- InterPro:   IPR005228
- InterPro:   IPR003746
- Gene3D:   G3DSA:3.30.1200.10
- TIGRFAMs:   TIGR00251

Pfam domain/function: PF02594 DUF167; SSF69786 DUF167

EC number: NA

Molecular weight: Translated: 10294; Mature: 10163

Theoretical pI: Translated: 9.82; Mature: 9.82

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
1.0 %Met     (Translated Protein)
2.1 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
0.0 %Met     (Mature Protein)
1.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSAVETCADGLVLRLYIQPKASRDSIVGVHGDELKVAITAPPVDGQANAHLVKFLAKQFR
CCHHHHHCCCEEEEEEECCCCCCCCEEEECCCCEEEEEECCCCCCCCCHHHHHHHHHHHH
VAKSQVLIEKGELGRHKQVKIIAPQQIPTAVAALTE
HHHHHHEEECCCCCCCCEEEEECCCCCCHHHHHCCC
>Mature Secondary Structure 
SAVETCADGLVLRLYIQPKASRDSIVGVHGDELKVAITAPPVDGQANAHLVKFLAKQFR
CHHHHHCCCEEEEEEECCCCCCCCEEEECCCCEEEEEECCCCCCCCCHHHHHHHHHHHH
VAKSQVLIEKGELGRHKQVKIIAPQQIPTAVAALTE
HHHHHHEEECCCCCCCCEEEEECCCCCCHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA