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The map label for this gene is recJ [H]

Identifier: 238896432

GI number: 238896432

Start: 4411951

End: 4413684

Strand: Reverse

Name: recJ [H]

Synonym: KP1_4608

Alternate gene names: 238896432

Gene position: 4413684-4411951 (Counterclockwise)

Preceding gene: 238896433

Following gene: 238896431

Centisome position: 84.09

GC content: 63.55

Gene sequence:

>1734_bases
GTGAAACAACAGATACAACTACGCCGCCGCGAGGCGGTTGACGGCGTCGAACTCCCCGCCGACCTGCCGCCGCTGCTGCA
GCGGCTATATGCCAGCCGCGGGGTGCGCAGCGCGCAGGAGCTGGAGCGCAGCGTCAAAGGCATGCTCCCCTGGACGCAGC
TCACCGGCGTTGAAAAAGCGGTCGAGATGCTGCATGACGCGTTCCAGAAAGGGTTGCACATCGTGGTGGTCGGTGATTTT
GACGCCGACGGCGCCACCAGCACCGCGCTCAGCGTGTTGGCCCTGCGCGCGCTGGGTTACGGCAACGTCTCCTATCTGGT
GCCGAACCGCTTTGAAGACGGCTACGGTTTAAGCCCGGAAGTGGTCGATCAGGCCCATGCTCGCGGCGCGCAGATGATCA
TGACCGTCGACAACGGGATCTCGTCCCATGCCGGCGTCGATCATGCCCATGCGCTGGGGATCCCGGTGCTGGTGACCGAT
CACCATCTGCCGGGCGAGACGCTGCCGGCGGCGGAAGCTATCGTTAATCCCAACCTGCGCGATTGCGACTTCCCGTCAAA
ATCACTGGCCGGGGTGGGGGTGGCGTTTTATCTGATGCTGGCGCTGCGCACTTTTCTGCGCGATAAAGGCTGGTTCGACG
CTCGCGGCATCCCCGCGCCGAACCTTGCCGAGCTGCTGGATCTGGTGGCGCTTGGCACCGTCGCGGACGTCGTGCCGCTG
GATGCTAACAACCGTATCCTCACCTGGCAGGGGTTAAGCCGCATTCGCGCCGGCAAATGTCGGCCCGGTATTAAGGCGCT
GCTGGAAATTGCCAACCGCGATCCGCAAAAGCTGGCGGCCAGCGACCTCGGTTTCGCCCTCGGGCCGCGCCTGAACGCGG
CGGGACGGCTTGACGACATGTCGGTCGGCGTCGCGCTGCTGCTGTGCGATAACATCGGCGAAGCGCGGGTGCTGGCCAAC
GAGCTCGATGCGCTTAATCAGACGCGCAAAGAGATTGAGCAGGGGATGCAGGCGGAAGCGCTAACGCTCTGTCAGCAGCT
GGAGCGCAGCGCCGATACCCTGCCCGGCGGGCTGGCGATGTACCATCCGCAATGGCATCAAGGGGTAGTCGGCATTCTCG
CCTCGCGGATTAAGGAGCGCTTCCATCGCCCGGTTATCGCTTTTGCGCCTACCGGCGACGGCACGCTGAAAGGCTCCGGC
CGTTCCATTCAGGGGTTGCATATGCGCGATGCGCTGGAGCGCCTTGATACGCTTTATCCCGGGCTAATCCTGAAGTTCGG
CGGCCACGCGATGGCGGCGGGCTTATCGCTGGAGGAGGCGCGTTTTGAAGAGTTTCAACAGCGCTTCGGCGAGCTGGTGA
CCGAATGGCTGGATCCTGCGCTGTTGCAGGGCGAGGTGGTTTCCGATGGCCCGCTGGCGGCGGCGGAGATGAGTATGGAA
GTGGCGCAGATGCTGCGCGACGCCGGGCCGTGGGGGCAGATGTTCCCGGAACCGCTGTTTGACGGTCGTTTTCGCCTGCT
GCAGCAGCGGCTGGTGGGCGAGCGTCACCTGAAGGTGATGGTCGAACCGGTTGACGGCGGGCCGCTGCTGGACGGTATCG
CCTTCAACGTTGATACTTCCATCTGGCCGGATAACGGCGTGCGTGAAGTCCAGTTAGCCTACAAGCTCGACATCAACGAG
TTCCGCGGCAACCGTAGCCTGCAGCTGATCATCGATCACCTCTGGCCAAATTGA

Upstream 100 bases:

>100_bases
TCCTCAGTAACGGCATGGTGCTGCCGGGCTATCAGGGGCCGAAAGAGCTGAAGGCGTTCCTTGATGAGCACAAAAAACAG
ACAAGCGGTAACTGATTCGC

Downstream 100 bases:

>100_bases
CAACAGTGTAGGAATAAGGGCGCGAATCCGGTAGAATTCCGCTCTTATCACCGCATTTTGACAAATCCATTAAAAGAAAC
CGACCATGTTTGAAATAAAT

Product: ssDNA exonuclease RecJ

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 577; Mature: 577

Protein sequence:

>577_residues
MKQQIQLRRREAVDGVELPADLPPLLQRLYASRGVRSAQELERSVKGMLPWTQLTGVEKAVEMLHDAFQKGLHIVVVGDF
DADGATSTALSVLALRALGYGNVSYLVPNRFEDGYGLSPEVVDQAHARGAQMIMTVDNGISSHAGVDHAHALGIPVLVTD
HHLPGETLPAAEAIVNPNLRDCDFPSKSLAGVGVAFYLMLALRTFLRDKGWFDARGIPAPNLAELLDLVALGTVADVVPL
DANNRILTWQGLSRIRAGKCRPGIKALLEIANRDPQKLAASDLGFALGPRLNAAGRLDDMSVGVALLLCDNIGEARVLAN
ELDALNQTRKEIEQGMQAEALTLCQQLERSADTLPGGLAMYHPQWHQGVVGILASRIKERFHRPVIAFAPTGDGTLKGSG
RSIQGLHMRDALERLDTLYPGLILKFGGHAMAAGLSLEEARFEEFQQRFGELVTEWLDPALLQGEVVSDGPLAAAEMSME
VAQMLRDAGPWGQMFPEPLFDGRFRLLQQRLVGERHLKVMVEPVDGGPLLDGIAFNVDTSIWPDNGVREVQLAYKLDINE
FRGNRSLQLIIDHLWPN

Sequences:

>Translated_577_residues
MKQQIQLRRREAVDGVELPADLPPLLQRLYASRGVRSAQELERSVKGMLPWTQLTGVEKAVEMLHDAFQKGLHIVVVGDF
DADGATSTALSVLALRALGYGNVSYLVPNRFEDGYGLSPEVVDQAHARGAQMIMTVDNGISSHAGVDHAHALGIPVLVTD
HHLPGETLPAAEAIVNPNLRDCDFPSKSLAGVGVAFYLMLALRTFLRDKGWFDARGIPAPNLAELLDLVALGTVADVVPL
DANNRILTWQGLSRIRAGKCRPGIKALLEIANRDPQKLAASDLGFALGPRLNAAGRLDDMSVGVALLLCDNIGEARVLAN
ELDALNQTRKEIEQGMQAEALTLCQQLERSADTLPGGLAMYHPQWHQGVVGILASRIKERFHRPVIAFAPTGDGTLKGSG
RSIQGLHMRDALERLDTLYPGLILKFGGHAMAAGLSLEEARFEEFQQRFGELVTEWLDPALLQGEVVSDGPLAAAEMSME
VAQMLRDAGPWGQMFPEPLFDGRFRLLQQRLVGERHLKVMVEPVDGGPLLDGIAFNVDTSIWPDNGVREVQLAYKLDINE
FRGNRSLQLIIDHLWPN
>Mature_577_residues
MKQQIQLRRREAVDGVELPADLPPLLQRLYASRGVRSAQELERSVKGMLPWTQLTGVEKAVEMLHDAFQKGLHIVVVGDF
DADGATSTALSVLALRALGYGNVSYLVPNRFEDGYGLSPEVVDQAHARGAQMIMTVDNGISSHAGVDHAHALGIPVLVTD
HHLPGETLPAAEAIVNPNLRDCDFPSKSLAGVGVAFYLMLALRTFLRDKGWFDARGIPAPNLAELLDLVALGTVADVVPL
DANNRILTWQGLSRIRAGKCRPGIKALLEIANRDPQKLAASDLGFALGPRLNAAGRLDDMSVGVALLLCDNIGEARVLAN
ELDALNQTRKEIEQGMQAEALTLCQQLERSADTLPGGLAMYHPQWHQGVVGILASRIKERFHRPVIAFAPTGDGTLKGSG
RSIQGLHMRDALERLDTLYPGLILKFGGHAMAAGLSLEEARFEEFQQRFGELVTEWLDPALLQGEVVSDGPLAAAEMSME
VAQMLRDAGPWGQMFPEPLFDGRFRLLQQRLVGERHLKVMVEPVDGGPLLDGIAFNVDTSIWPDNGVREVQLAYKLDINE
FRGNRSLQLIIDHLWPN

Specific function: Single-stranded-DNA-specific exonuclease. Required for many types of recombinational events, although the stringency of the requirement for recJ appears to vary with the type of recombinational event monitored and the other recombination gene products whi

COG id: COG0608

COG function: function code L; Single-stranded DNA-specific exonuclease

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the recJ family [H]

Homologues:

Organism=Escherichia coli, GI1789259, Length=576, Percent_Identity=88.7152777777778, Blast_Score=1056, Evalue=0.0,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR008279
- InterPro:   IPR003156
- InterPro:   IPR001667
- InterPro:   IPR004610 [H]

Pfam domain/function: PF01368 DHH; PF02272 DHHA1 [H]

EC number: 3.1.-.- [C]

Molecular weight: Translated: 62993; Mature: 62993

Theoretical pI: Translated: 5.37; Mature: 5.37

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
3.5 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
2.8 %Met     (Mature Protein)
3.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKQQIQLRRREAVDGVELPADLPPLLQRLYASRGVRSAQELERSVKGMLPWTQLTGVEKA
CCCHHHHHHHHCCCCCCCCCCCHHHHHHHHHHCCCCHHHHHHHHHHHCCCHHHHHHHHHH
VEMLHDAFQKGLHIVVVGDFDADGATSTALSVLALRALGYGNVSYLVPNRFEDGYGLSPE
HHHHHHHHHCCCEEEEEECCCCCCCHHHHHHHHHHHHHCCCCEEEECCCCCCCCCCCCHH
VVDQAHARGAQMIMTVDNGISSHAGVDHAHALGIPVLVTDHHLPGETLPAAEAIVNPNLR
HHHHHHCCCCEEEEEECCCCCCCCCCCHHHHCCCCEEEECCCCCCCCCCHHHHHCCCCCC
DCDFPSKSLAGVGVAFYLMLALRTFLRDKGWFDARGIPAPNLAELLDLVALGTVADVVPL
CCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHEEC
DANNRILTWQGLSRIRAGKCRPGIKALLEIANRDPQKLAASDLGFALGPRLNAAGRLDDM
CCCCCEEEECCHHHHHCCCCCHHHHHHHHHHCCCHHHHHHHHCCHHHCCCCCCCCCCCHH
SVGVALLLCDNIGEARVLANELDALNQTRKEIEQGMQAEALTLCQQLERSADTLPGGLAM
HHCCCEEEECCCCHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHCCCCCCEEE
YHPQWHQGVVGILASRIKERFHRPVIAFAPTGDGTLKGSGRSIQGLHMRDALERLDTLYP
ECCCHHHHHHHHHHHHHHHHHCCCEEEEECCCCCCCCCCCCCCCCCHHHHHHHHHHHHCC
GLILKFGGHAMAAGLSLEEARFEEFQQRFGELVTEWLDPALLQGEVVSDGPLAAAEMSME
CHHHHCCCCHHHHCCCHHHHHHHHHHHHHHHHHHHHHCHHHHCCCCCCCCCCHHHHHHHH
VAQMLRDAGPWGQMFPEPLFDGRFRLLQQRLVGERHLKVMVEPVDGGPLLDGIAFNVDTS
HHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHCCCCEEEEEEEECCCCCCCCCEEEECCCC
IWPDNGVREVQLAYKLDINEFRGNRSLQLIIDHLWPN
CCCCCCCEEEEEEEEECHHHHCCCCCCEEEEHHHCCC
>Mature Secondary Structure
MKQQIQLRRREAVDGVELPADLPPLLQRLYASRGVRSAQELERSVKGMLPWTQLTGVEKA
CCCHHHHHHHHCCCCCCCCCCCHHHHHHHHHHCCCCHHHHHHHHHHHCCCHHHHHHHHHH
VEMLHDAFQKGLHIVVVGDFDADGATSTALSVLALRALGYGNVSYLVPNRFEDGYGLSPE
HHHHHHHHHCCCEEEEEECCCCCCCHHHHHHHHHHHHHCCCCEEEECCCCCCCCCCCCHH
VVDQAHARGAQMIMTVDNGISSHAGVDHAHALGIPVLVTDHHLPGETLPAAEAIVNPNLR
HHHHHHCCCCEEEEEECCCCCCCCCCCHHHHCCCCEEEECCCCCCCCCCHHHHHCCCCCC
DCDFPSKSLAGVGVAFYLMLALRTFLRDKGWFDARGIPAPNLAELLDLVALGTVADVVPL
CCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHEEC
DANNRILTWQGLSRIRAGKCRPGIKALLEIANRDPQKLAASDLGFALGPRLNAAGRLDDM
CCCCCEEEECCHHHHHCCCCCHHHHHHHHHHCCCHHHHHHHHCCHHHCCCCCCCCCCCHH
SVGVALLLCDNIGEARVLANELDALNQTRKEIEQGMQAEALTLCQQLERSADTLPGGLAM
HHCCCEEEECCCCHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHCCCCCCEEE
YHPQWHQGVVGILASRIKERFHRPVIAFAPTGDGTLKGSGRSIQGLHMRDALERLDTLYP
ECCCHHHHHHHHHHHHHHHHHCCCEEEEECCCCCCCCCCCCCCCCCHHHHHHHHHHHHCC
GLILKFGGHAMAAGLSLEEARFEEFQQRFGELVTEWLDPALLQGEVVSDGPLAAAEMSME
CHHHHCCCCHHHHCCCHHHHHHHHHHHHHHHHHHHHHCHHHHCCCCCCCCCCHHHHHHHH
VAQMLRDAGPWGQMFPEPLFDGRFRLLQQRLVGERHLKVMVEPVDGGPLLDGIAFNVDTS
HHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHCCCCEEEEEEEECCCCCCCCCEEEECCCC
IWPDNGVREVQLAYKLDINEFRGNRSLQLIIDHLWPN
CCCCCCCEEEEEEEEECHHHHCCCCCCEEEEHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: Hydrolase; Acting on ester bonds [C]

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 1987126; 9278503; 2649886 [H]