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The map label for this gene is idi [H]

Identifier: 238896429

GI number: 238896429

Start: 4408451

End: 4409005

Strand: Direct

Name: idi [H]

Synonym: KP1_4604

Alternate gene names: 238896429

Gene position: 4408451-4409005 (Clockwise)

Preceding gene: 238896427

Following gene: 238896435

Centisome position: 83.99

GC content: 61.08

Gene sequence:

>555_bases
ATGGCCGGGGAACACGTCATTTTGCTGGATGAGCAGGATCAGCCTGCCGGTATGCTGGAGAAGTATGCCGCCCATACGTT
TGATACCCCTTTACATCTCGCGTTTTCCTGCTGGCTGTTTAACCAGCAGGGTCAGTTGCTGGTCACTCGCCGTTCGTTGG
GCAAAAAAGCCTGGCCCGGGGTATGGACCAACTCGGTCTGCGGACACCCCCAGCAGGGCGAGACCTTCGAGCAGGCCGTC
ACGCGCCGCTGTCGCTTCGAACTCGGTGTGGAGATCTCTGATATCGCGCCGGTTCACCCGGCCTTCCGCTACCGGGCGGT
CGCCCCAAACGGTATCGTTGAGAACGAAGTGTGCCCGGTATATGCCGCGCGCGTGGTAAGCGAAGTGCAGCCTAACGACG
ATGAAGTCATGGACTATCAGTGGGTTGACCTGGCAACCATGTTAAGCGCGCTGGCCGCCACGCCGTGGGCGTTCAGCCCG
TGGATGGTGCTGGAAGCGGAAAATCGGGACGCCCGCCAGGCGCTGACCGACTTTGTTGCGCGTCTGCGCGGGTAA

Upstream 100 bases:

>100_bases
TTTTGGTAATGCCTTTCTCCCATTTATGGGCTACCCTAGTGGCCTGAGTACATGACCCGGCGGGTTTGTGCCGGGTCATT
TTTTATTTTCAGGAGTCGTC

Downstream 100 bases:

>100_bases
GCTGACTATTCTCCAGGCCAGGCGCAGCCCTGTGCCTGTCATTAATGCCTGGCGGCGCTACGCTTGCACAGGCCTACGGT
TCTGCGCCATTGCGTAGCCC

Product: isopentenyl-diphosphate delta-isomerase

Products: NA

Alternate protein names: IPP isomerase; IPP:DMAPP isomerase; Isopentenyl pyrophosphate isomerase [H]

Number of amino acids: Translated: 184; Mature: 183

Protein sequence:

>184_residues
MAGEHVILLDEQDQPAGMLEKYAAHTFDTPLHLAFSCWLFNQQGQLLVTRRSLGKKAWPGVWTNSVCGHPQQGETFEQAV
TRRCRFELGVEISDIAPVHPAFRYRAVAPNGIVENEVCPVYAARVVSEVQPNDDEVMDYQWVDLATMLSALAATPWAFSP
WMVLEAENRDARQALTDFVARLRG

Sequences:

>Translated_184_residues
MAGEHVILLDEQDQPAGMLEKYAAHTFDTPLHLAFSCWLFNQQGQLLVTRRSLGKKAWPGVWTNSVCGHPQQGETFEQAV
TRRCRFELGVEISDIAPVHPAFRYRAVAPNGIVENEVCPVYAARVVSEVQPNDDEVMDYQWVDLATMLSALAATPWAFSP
WMVLEAENRDARQALTDFVARLRG
>Mature_183_residues
AGEHVILLDEQDQPAGMLEKYAAHTFDTPLHLAFSCWLFNQQGQLLVTRRSLGKKAWPGVWTNSVCGHPQQGETFEQAVT
RRCRFELGVEISDIAPVHPAFRYRAVAPNGIVENEVCPVYAARVVSEVQPNDDEVMDYQWVDLATMLSALAATPWAFSPW
MVLEAENRDARQALTDFVARLRG

Specific function: Catalyzes the 1,3-allylic rearrangement of the homoallylic substrate isopentenyl (IPP) to its highly electrophilic allylic isomer, dimethylallyl diphosphate (DMAPP) [H]

COG id: COG1443

COG function: function code I; Isopentenyldiphosphate isomerase

Gene ontology:

Cell location: Cytoplasm [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 nudix hydrolase domain [H]

Homologues:

Organism=Homo sapiens, GI40018633, Length=186, Percent_Identity=26.8817204301075, Blast_Score=69, Evalue=2e-12,
Organism=Escherichia coli, GI1789255, Length=179, Percent_Identity=69.8324022346369, Blast_Score=266, Evalue=5e-73,
Organism=Caenorhabditis elegans, GI17554092, Length=174, Percent_Identity=28.735632183908, Blast_Score=69, Evalue=2e-12,
Organism=Saccharomyces cerevisiae, GI6325140, Length=195, Percent_Identity=28.2051282051282, Blast_Score=80, Evalue=2e-16,
Organism=Drosophila melanogaster, GI281362205, Length=187, Percent_Identity=29.9465240641711, Blast_Score=82, Evalue=3e-16,
Organism=Drosophila melanogaster, GI24648688, Length=187, Percent_Identity=29.9465240641711, Blast_Score=82, Evalue=3e-16,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011876
- InterPro:   IPR000086
- InterPro:   IPR015797 [H]

Pfam domain/function: PF00293 NUDIX [H]

EC number: =5.3.3.2 [H]

Molecular weight: Translated: 20672; Mature: 20540

Theoretical pI: Translated: 4.84; Mature: 4.84

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.2 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
4.9 %Cys+Met (Translated Protein)
2.2 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
4.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAGEHVILLDEQDQPAGMLEKYAAHTFDTPLHLAFSCWLFNQQGQLLVTRRSLGKKAWPG
CCCCEEEEEECCCCCHHHHHHHHHHCCCCHHHEEEEEEEECCCCCEEEEEHHCCCCCCCC
VWTNSVCGHPQQGETFEQAVTRRCRFELGVEISDIAPVHPAFRYRAVAPNGIVENEVCPV
CCCCCCCCCCCCCCHHHHHHHHHHHHHCCCEECCCCCCCHHHEEEEECCCCCCCCCCCHH
YAARVVSEVQPNDDEVMDYQWVDLATMLSALAATPWAFSPWMVLEAENRDARQALTDFVA
HHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCEEEEECCCCHHHHHHHHHHH
RLRG
HHCC
>Mature Secondary Structure 
AGEHVILLDEQDQPAGMLEKYAAHTFDTPLHLAFSCWLFNQQGQLLVTRRSLGKKAWPG
CCCEEEEEECCCCCHHHHHHHHHHCCCCHHHEEEEEEEECCCCCEEEEEHHCCCCCCCC
VWTNSVCGHPQQGETFEQAVTRRCRFELGVEISDIAPVHPAFRYRAVAPNGIVENEVCPV
CCCCCCCCCCCCCCHHHHHHHHHHHHHCCCEECCCCCCCHHHEEEEECCCCCCCCCCCHH
YAARVVSEVQPNDDEVMDYQWVDLATMLSALAATPWAFSPWMVLEAENRDARQALTDFVA
HHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCEEEEECCCCHHHHHHHHHHH
RLRG
HHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA