Click here to switch to the map view.

The map label for this gene is fimI [H]

Identifier: 238896400

GI number: 238896400

Start: 4381127

End: 4381762

Strand: Direct

Name: fimI [H]

Synonym: KP1_4572

Alternate gene names: 238896400

Gene position: 4381127-4381762 (Clockwise)

Preceding gene: 238896399

Following gene: 238896401

Centisome position: 83.47

GC content: 58.02

Gene sequence:

>636_bases
ATGCCACGTTCAAAGTGCAGTACGAGTAAGACCCGAGTCAGGCAAGGAAGCTATTCGGGCCAGGAGGGCCCGCTCTCTAT
TTTCAACCGGAGTGAAACGATGCAGGGAATGAAATCTGGTCTGCTGCTGCTACTGCCTCCGCTGGCGCTGGCCGGTAATC
ATTGGAACGTCACGTTGCCGGGGGGCAGCATGCGTTTTCAGGGCCTGATAATGGCGAGCTCCTGCCGCGTCGAAGCCGGC
GATCGGCAGATGACGGTCAATCTGGGGCAGATCAGCAGTAATCGATTTCATGCTGTCGGCGAAGACAGCAACCCAATCCC
TTTCGCGATTCATTTACAGGATTGCAGTACGGCGGTCAGCCAGCATGTGGGTGTGACCTTTCACGGCGTGGCTGATGGAA
AAAACCCCGATGTGCTGTCGGTGGGTGAAGGTCCGGGGATCGCCAGTGGGATCGGTATTGCGCTATTCGACAGCCAGGGC
CAGCAGCTCCCGCTCAATCGTCCAGCGGATCGCTGGATATCACTCTACCGCGGACCGACGACGCTAAATTTCGTCGCCAA
ATATCGGGCGACCGGACGCCAGGTCACCGGCGGTGCAGCCAATGCCCAGGCCTGGTTCTCATTGACCTATCAGTAA

Upstream 100 bases:

>100_bases
TTCAGTGCTGCGACCACGCTGAATGACGGCCCCAACATCATCCCGTTCCAGGCACGTTACTACGCGACCGGCGCAGCGAC
GGCTGGTATAGCGAACGCGG

Downstream 100 bases:

>100_bases
TTAATCCGCAGACAAACAGGACAACACGGTGAGCAGACAAGGAGATAATGTGAGAAAAACGGCAACGATGGCGCATGGCT
TACTGGCAGGATGTGTGCTT

Product: type 1 pilus biosynthesis fimbrial protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 211; Mature: 210

Protein sequence:

>211_residues
MPRSKCSTSKTRVRQGSYSGQEGPLSIFNRSETMQGMKSGLLLLLPPLALAGNHWNVTLPGGSMRFQGLIMASSCRVEAG
DRQMTVNLGQISSNRFHAVGEDSNPIPFAIHLQDCSTAVSQHVGVTFHGVADGKNPDVLSVGEGPGIASGIGIALFDSQG
QQLPLNRPADRWISLYRGPTTLNFVAKYRATGRQVTGGAANAQAWFSLTYQ

Sequences:

>Translated_211_residues
MPRSKCSTSKTRVRQGSYSGQEGPLSIFNRSETMQGMKSGLLLLLPPLALAGNHWNVTLPGGSMRFQGLIMASSCRVEAG
DRQMTVNLGQISSNRFHAVGEDSNPIPFAIHLQDCSTAVSQHVGVTFHGVADGKNPDVLSVGEGPGIASGIGIALFDSQG
QQLPLNRPADRWISLYRGPTTLNFVAKYRATGRQVTGGAANAQAWFSLTYQ
>Mature_210_residues
PRSKCSTSKTRVRQGSYSGQEGPLSIFNRSETMQGMKSGLLLLLPPLALAGNHWNVTLPGGSMRFQGLIMASSCRVEAGD
RQMTVNLGQISSNRFHAVGEDSNPIPFAIHLQDCSTAVSQHVGVTFHGVADGKNPDVLSVGEGPGIASGIGIALFDSQGQ
QLPLNRPADRWISLYRGPTTLNFVAKYRATGRQVTGGAANAQAWFSLTYQ

Specific function: Unknown

COG id: COG3539

COG function: function code NU; P pilus assembly protein, pilin FimA

Gene ontology:

Cell location: Fimbrium (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the fimbrial protein family [H]

Homologues:

Organism=Escherichia coli, GI87082421, Length=168, Percent_Identity=74.4047619047619, Blast_Score=276, Evalue=1e-75,
Organism=Escherichia coli, GI1790773, Length=152, Percent_Identity=39.4736842105263, Blast_Score=98, Evalue=4e-22,
Organism=Escherichia coli, GI87081805, Length=166, Percent_Identity=35.5421686746988, Blast_Score=86, Evalue=2e-18,
Organism=Escherichia coli, GI87081753, Length=160, Percent_Identity=32.5, Blast_Score=82, Evalue=3e-17,
Organism=Escherichia coli, GI1787781, Length=151, Percent_Identity=30.4635761589404, Blast_Score=76, Evalue=2e-15,
Organism=Escherichia coli, GI1790769, Length=156, Percent_Identity=34.6153846153846, Blast_Score=73, Evalue=1e-14,
Organism=Escherichia coli, GI1789422, Length=185, Percent_Identity=27.027027027027, Blast_Score=72, Evalue=3e-14,
Organism=Escherichia coli, GI1787174, Length=153, Percent_Identity=29.4117647058824, Blast_Score=64, Evalue=7e-12,
Organism=Escherichia coli, GI87081804, Length=153, Percent_Identity=27.4509803921569, Blast_Score=62, Evalue=3e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR008966
- InterPro:   IPR000259
- InterPro:   IPR014779 [H]

Pfam domain/function: PF00419 Fimbrial [H]

EC number: NA

Molecular weight: Translated: 22546; Mature: 22415

Theoretical pI: Translated: 9.91; Mature: 9.91

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
4.3 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
3.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPRSKCSTSKTRVRQGSYSGQEGPLSIFNRSETMQGMKSGLLLLLPPLALAGNHWNVTLP
CCCCCCCCCHHHHCCCCCCCCCCCEEEECCHHHHHHHHCCEEEEECCHHHCCCCEEEEEC
GGSMRFQGLIMASSCRVEAGDRQMTVNLGQISSNRFHAVGEDSNPIPFAIHLQDCSTAVS
CCCEEEEEEEEECCCEEECCCEEEEEEECCCCCCEEEEECCCCCCCEEEEEECHHHHHHH
QHVGVTFHGVADGKNPDVLSVGEGPGIASGIGIALFDSQGQQLPLNRPADRWISLYRGPT
HHCCEEEEEECCCCCCCEEEECCCCCCCCCCEEEEECCCCCCCCCCCCHHHHHEECCCCC
TLNFVAKYRATGRQVTGGAANAQAWFSLTYQ
EEEEEEEHHCCCCEEECCCCCCEEEEEEEEC
>Mature Secondary Structure 
PRSKCSTSKTRVRQGSYSGQEGPLSIFNRSETMQGMKSGLLLLLPPLALAGNHWNVTLP
CCCCCCCCHHHHCCCCCCCCCCCEEEECCHHHHHHHHCCEEEEECCHHHCCCCEEEEEC
GGSMRFQGLIMASSCRVEAGDRQMTVNLGQISSNRFHAVGEDSNPIPFAIHLQDCSTAVS
CCCEEEEEEEEECCCEEECCCEEEEEEECCCCCCEEEEECCCCCCCEEEEEECHHHHHHH
QHVGVTFHGVADGKNPDVLSVGEGPGIASGIGIALFDSQGQQLPLNRPADRWISLYRGPT
HHCCEEEEEECCCCCCCEEEECCCCCCCCCCEEEEECCCCCCCCCCCCHHHHHEECCCCC
TLNFVAKYRATGRQVTGGAANAQAWFSLTYQ
EEEEEEEHHCCCCEEECCCCCCEEEEEEEEC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 7610040; 9278503; 6147250 [H]