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The map label for this gene is ygeD [H]

Identifier: 238896352

GI number: 238896352

Start: 4331435

End: 4332628

Strand: Reverse

Name: ygeD [H]

Synonym: KP1_4516

Alternate gene names: 238896352

Gene position: 4332628-4331435 (Counterclockwise)

Preceding gene: 238896353

Following gene: 238896346

Centisome position: 82.55

GC content: 63.07

Gene sequence:

>1194_bases
ATGAGTGAGTCAGTACATGCTAACCCTTCGCTGTACTCGAAAGGGATGGTGGCGGTGATCTGCGCCCAGTTCCTGTCGGC
CTTCGGCGACAATGCGCTTCTTTTCGCCACCCTGGCGCTGATGAAGCAGCTCTATTATCCGGAGTGGAGCCAGCCGGTCC
TGCAGATGTTGTTTGTGGGCGCTTACATCCTCTTTGCCCCCTTTGTCGGCCAGTTCGCCGATAGCTTTGCCAAAGGCCGG
GTGATGATGGTGGCCAACGGCCTGAAACTGCTCGGCGCCGGCTGCATCTGCTTCGGCGTCAATCCGTTTATCGGCTATAC
GCTGGTGGGGATTGGCGCCGCCGCCTATTCGCCGGCCAAGTATGGCATTCTCGGCGAACTCACCACCGGCGATAAGTTAG
TGAAGGCTAACGGACTGATGGAGTCCTCGACCATCGCGGCGATCCTGCTGGGCTCCATGGCCGGCGGGATCCTCGCCGAC
TGGCACGTGCTGGCGGCGCTGATCGTCTGCGCGCTGGTCTACGGCGGGGCGGTAGTGGCTAACCTGTGGATACCCAGGCT
GCCGGCGGCGCGTCCGGGGCAGTCGTGGCGTTTTAAGCCAATGACGCACAGCTTCTTCAGCGCCTGCCGGACGCTGTGGC
GCAACGGCGAAACCCGCTTTTCGCTGATGGGCACCAGCCTGTTCTGGGGCGCTGGCGTGACCCTGCGTTTCCTGCTGGTG
ATCTGGGTGCCGGTGGCGCTGGGCATTACCAGCAACGCCATGCCCACCTATCTTAATGCGATGGTAGCGGTGGGGATTGT
GCTGGGTGCCGGGGCGGCGGCGAAGCTGGTGACCCTGGAGACGGTGTCGCGCTGTATGCCGGCCGGGATTTTGATCGGTA
TCGCGGTGATAGCCTTTGCGGTGCAGCAGTCGCTGCTGCCGGCGTTCGGTCTGCTGCTGCTGCTCGGGGTGTTCGGCGGG
TTCTTTATCGTACCGCTGAACGCGCTGCTGCAGGAGCGTGGGAAACATTCGGTCGGGGCAGGTAACGCCATTGCGGTACA
GAACCTCGGTGAGAACGTGGCGATGCTGCTGATGCTGGGGCTCTATTCCCTGGCGGTGAGCGTGGGCGTTCCACCGGTCG
CCGTGGGGATAGGCTTTGGCGCGGTATTCGCCGTGGCCATCGCCGCGCTGTGGGTCTGGGGGCGGCGTAAATAA

Upstream 100 bases:

>100_bases
CCGCGAGATATACGCTGGCTGAAACAGCTACCGGTGCTCGGCAGCGGCAAGCCAGACTATGTCACCCTGAAAAATATGGT
CGACGAGGCGGAAACAACCC

Downstream 100 bases:

>100_bases
CCTCCCGGCTTGCGCTGCGCTTGACTGGGCGATGGGGTCGCCAATATCTGCTCTTCGGTAGCCCGGGTAAGGCGTATACG
CCTTACCCGGGGCTTTGCTT

Product: lysophospholipid transporter LplT

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 397; Mature: 396

Protein sequence:

>397_residues
MSESVHANPSLYSKGMVAVICAQFLSAFGDNALLFATLALMKQLYYPEWSQPVLQMLFVGAYILFAPFVGQFADSFAKGR
VMMVANGLKLLGAGCICFGVNPFIGYTLVGIGAAAYSPAKYGILGELTTGDKLVKANGLMESSTIAAILLGSMAGGILAD
WHVLAALIVCALVYGGAVVANLWIPRLPAARPGQSWRFKPMTHSFFSACRTLWRNGETRFSLMGTSLFWGAGVTLRFLLV
IWVPVALGITSNAMPTYLNAMVAVGIVLGAGAAAKLVTLETVSRCMPAGILIGIAVIAFAVQQSLLPAFGLLLLLGVFGG
FFIVPLNALLQERGKHSVGAGNAIAVQNLGENVAMLLMLGLYSLAVSVGVPPVAVGIGFGAVFAVAIAALWVWGRRK

Sequences:

>Translated_397_residues
MSESVHANPSLYSKGMVAVICAQFLSAFGDNALLFATLALMKQLYYPEWSQPVLQMLFVGAYILFAPFVGQFADSFAKGR
VMMVANGLKLLGAGCICFGVNPFIGYTLVGIGAAAYSPAKYGILGELTTGDKLVKANGLMESSTIAAILLGSMAGGILAD
WHVLAALIVCALVYGGAVVANLWIPRLPAARPGQSWRFKPMTHSFFSACRTLWRNGETRFSLMGTSLFWGAGVTLRFLLV
IWVPVALGITSNAMPTYLNAMVAVGIVLGAGAAAKLVTLETVSRCMPAGILIGIAVIAFAVQQSLLPAFGLLLLLGVFGG
FFIVPLNALLQERGKHSVGAGNAIAVQNLGENVAMLLMLGLYSLAVSVGVPPVAVGIGFGAVFAVAIAALWVWGRRK
>Mature_396_residues
SESVHANPSLYSKGMVAVICAQFLSAFGDNALLFATLALMKQLYYPEWSQPVLQMLFVGAYILFAPFVGQFADSFAKGRV
MMVANGLKLLGAGCICFGVNPFIGYTLVGIGAAAYSPAKYGILGELTTGDKLVKANGLMESSTIAAILLGSMAGGILADW
HVLAALIVCALVYGGAVVANLWIPRLPAARPGQSWRFKPMTHSFFSACRTLWRNGETRFSLMGTSLFWGAGVTLRFLLVI
WVPVALGITSNAMPTYLNAMVAVGIVLGAGAAAKLVTLETVSRCMPAGILIGIAVIAFAVQQSLLPAFGLLLLLGVFGGF
FIVPLNALLQERGKHSVGAGNAIAVQNLGENVAMLLMLGLYSLAVSVGVPPVAVGIGFGAVFAVAIAALWVWGRRK

Specific function: Catalyzes the facilitated diffusion of 2-acyl-glycero-3- phosphoethanolamine (2-acyl-GPE) into the cell [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the major facilitator superfamily. LplT (TC 2.A.1.42) family [H]

Homologues:

Organism=Escherichia coli, GI1789200, Length=397, Percent_Identity=81.360201511335, Blast_Score=617, Evalue=1e-178,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011701
- InterPro:   IPR016196 [H]

Pfam domain/function: PF07690 MFS_1 [H]

EC number: NA

Molecular weight: Translated: 41654; Mature: 41523

Theoretical pI: Translated: 9.80; Mature: 9.80

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.5 %Cys     (Translated Protein)
3.8 %Met     (Translated Protein)
5.3 %Cys+Met (Translated Protein)
1.5 %Cys     (Mature Protein)
3.5 %Met     (Mature Protein)
5.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSESVHANPSLYSKGMVAVICAQFLSAFGDNALLFATLALMKQLYYPEWSQPVLQMLFVG
CCCCCCCCCCHHHCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHH
AYILFAPFVGQFADSFAKGRVMMVANGLKLLGAGCICFGVNPFIGYTLVGIGAAAYSPAK
HHHHHHHHHHHHHHHHHCCEEEEEECCHHHHHCCHHEECCCHHHHHHHHHHHHHHCCCCC
YGILGELTTGDKLVKANGLMESSTIAAILLGSMAGGILADWHVLAALIVCALVYGGAVVA
CCCEEECCCCCCCHHHCCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCHHHH
NLWIPRLPAARPGQSWRFKPMTHSFFSACRTLWRNGETRFSLMGTSLFWGAGVTLRFLLV
HHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCEEEEECCHHHHHCCHHHHHHHH
IWVPVALGITSNAMPTYLNAMVAVGIVLGAGAAAKLVTLETVSRCMPAGILIGIAVIAFA
HHHHHHHCCCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
VQQSLLPAFGLLLLLGVFGGFFIVPLNALLQERGKHSVGAGNAIAVQNLGENVAMLLMLG
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEHHHCCHHHHHHHHHH
LYSLAVSVGVPPVAVGIGFGAVFAVAIAALWVWGRRK
HHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHCCCC
>Mature Secondary Structure 
SESVHANPSLYSKGMVAVICAQFLSAFGDNALLFATLALMKQLYYPEWSQPVLQMLFVG
CCCCCCCCCHHHCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHH
AYILFAPFVGQFADSFAKGRVMMVANGLKLLGAGCICFGVNPFIGYTLVGIGAAAYSPAK
HHHHHHHHHHHHHHHHHCCEEEEEECCHHHHHCCHHEECCCHHHHHHHHHHHHHHCCCCC
YGILGELTTGDKLVKANGLMESSTIAAILLGSMAGGILADWHVLAALIVCALVYGGAVVA
CCCEEECCCCCCCHHHCCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCHHHH
NLWIPRLPAARPGQSWRFKPMTHSFFSACRTLWRNGETRFSLMGTSLFWGAGVTLRFLLV
HHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCEEEEECCHHHHHCCHHHHHHHH
IWVPVALGITSNAMPTYLNAMVAVGIVLGAGAAAKLVTLETVSRCMPAGILIGIAVIAFA
HHHHHHHCCCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
VQQSLLPAFGLLLLLGVFGGFFIVPLNALLQERGKHSVGAGNAIAVQNLGENVAMLLMLG
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEHHHCCHHHHHHHHHH
LYSLAVSVGVPPVAVGIGFGAVFAVAIAALWVWGRRK
HHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: NA