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The map label for this gene is soxA [H]

Identifier: 238896266

GI number: 238896266

Start: 4246049

End: 4247602

Strand: Reverse

Name: soxA [H]

Synonym: KP1_4424

Alternate gene names: 238896266

Gene position: 4247602-4246049 (Counterclockwise)

Preceding gene: 238896267

Following gene: 238896265

Centisome position: 80.93

GC content: 62.61

Gene sequence:

>1554_bases
ATGCCGCTGACGTGGCGGCGCAAGCGTTACTCACGCTCGGGATCCCGCAGGACTCCCGATGTCCTGCGTACTGAATACCT
CTCTTTCTTTTCCCTGATTCATTTTGCCGCGTGCGCCCCGGCGACGGGCCGCGCTATGGAGATTGCTATGTCATCACAAC
GTGAAATTCGTCTTAACGCTTTCGATATGAACTGCGTCGGCCATCAGTCGCCGGGCCTGTGGGCGCATCCCCGGGATCGC
TCCTGGCAGTATAAAGATCTGGAGTACTGGGTGGATCTGGCGCGGCTGCTGGAGCGCGGCAAGTTCGACGGGCTGTTTAT
CGCCGACGTGCTGGGGATCTATGACGTGCTGAACGGCAGCGGCGATGCGGCGATCCGCCAGGCGACGCAGGTTCCGGTCA
ACGATCCGCTGGCTCTGATCACCCCAATGGCGCTGGTGACGGAGCATCTGGGCTTCGGCCTGACCGCCTCGCTGTCGTTT
GAGCATCCTTACCCCTTCGCTCGTCGTCTGTCGACGCTCGATCATCTGACCAAAGGGCGGGTGGGCTGGAATATCGTCAC
CTCCTATCTGGAGAGCGGGGCGCGCAATATCGGCCAGCAGACCCAGACCGACCATGACACCCGCTATGACTATGCCGATG
AGTATTTGCAGGTGATCTATAAGTTGCTGGAGGGAAGCTGGGAGGATGGGGCGGTGCTGCGCGACAGAGAGCGGAAGATC
TTCAGCGATCCGCGGAAAATCCATCCCATTAACCATCAGGGACAGTTCTTTTCCGTGCCGGGGATCCACCTCTGCGAGCC
ATCCCCGCAGCGCACGCCGGTGCTGTATCAGGCGGGGGCGTCCAGCCGCGGCAAACAGTTCGCCGCCGGCCATGCCGAAT
GCGTCTTCGTCGCAGCGCCGTCGAAGGTGCTGCTGAAGAAGACGGTGGCGGATATTCGCCGCCGGGCAGCTGAGGCGGGG
CGCGATCCGCACAGCATCCTGATCTTCAACCTGCAGACGGTGATTGTCGGCGACACCGACCGCGAGGCACAGGCGAAGTG
GCAGGAATATAAGCAGTACGTCAGCTATGAAGGCGCGCTGGCGCTGCTCTCCGGCTGGACGGGGATCGATTTCGGCCAGT
ATCAGCCGGATCAGGTGCTGAAGTATCTGCACACCAACGCCATTCAGTCGGCGGTGGAGGCCTTTTCGACCGCTGATCCG
AACCGCCAGTGGACGGTGCAGGCCCTGGCCGATTGGGCGGGGATCGGCGGCTTCGGTCCGCTGGTGGTTGGCAGCGCGCA
AACCGTGGCGGACGAACTGCAGTCCTGGGTCGAAGAGACGGACGTCGATGGCTTTAACCTCGCCTATGCCGTCACTCACG
AAACCTTCCGCGATGTCGTCGAGCTGCTGGTGCCTGAGCTGCAAAAGCGCGGCGTCTTTAAGCAAGAGTACCGCGAGGGG
ACCCTGCGCGAAAAACTGTTCGGCGGCGGCCCGCGTCTGGCCGCGCCTCACCCGGGCGCCAGCTACCGCCGCGATGCGCG
CACGGCGGCATCGGTAGAGGAGAAGGTGACATGA

Upstream 100 bases:

>100_bases
GTGGCTGAGCCGCACGTTGAGGCGCTGCCGGTGCTGGTGGCCGGTCCGGCCGCCCGCGGGCGTTTTGGCGAACTGATGGG
CCTGCCGCAGGTAGCCGACC

Downstream 100 bases:

>100_bases
TCGCTATTGATGACCTGCATAAAAGTTACCGCACAGCGGATGGCCGGCTCAGCGCGGTGCTGAAAGGGCTGTCGCTGCAG
GTGCCTGAGCGCTCCATCAC

Product: coenzyme F420-dependent N5 N10-methylene tetrahydromethanopterin reductase-like protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 517; Mature: 516

Protein sequence:

>517_residues
MPLTWRRKRYSRSGSRRTPDVLRTEYLSFFSLIHFAACAPATGRAMEIAMSSQREIRLNAFDMNCVGHQSPGLWAHPRDR
SWQYKDLEYWVDLARLLERGKFDGLFIADVLGIYDVLNGSGDAAIRQATQVPVNDPLALITPMALVTEHLGFGLTASLSF
EHPYPFARRLSTLDHLTKGRVGWNIVTSYLESGARNIGQQTQTDHDTRYDYADEYLQVIYKLLEGSWEDGAVLRDRERKI
FSDPRKIHPINHQGQFFSVPGIHLCEPSPQRTPVLYQAGASSRGKQFAAGHAECVFVAAPSKVLLKKTVADIRRRAAEAG
RDPHSILIFNLQTVIVGDTDREAQAKWQEYKQYVSYEGALALLSGWTGIDFGQYQPDQVLKYLHTNAIQSAVEAFSTADP
NRQWTVQALADWAGIGGFGPLVVGSAQTVADELQSWVEETDVDGFNLAYAVTHETFRDVVELLVPELQKRGVFKQEYREG
TLREKLFGGGPRLAAPHPGASYRRDARTAASVEEKVT

Sequences:

>Translated_517_residues
MPLTWRRKRYSRSGSRRTPDVLRTEYLSFFSLIHFAACAPATGRAMEIAMSSQREIRLNAFDMNCVGHQSPGLWAHPRDR
SWQYKDLEYWVDLARLLERGKFDGLFIADVLGIYDVLNGSGDAAIRQATQVPVNDPLALITPMALVTEHLGFGLTASLSF
EHPYPFARRLSTLDHLTKGRVGWNIVTSYLESGARNIGQQTQTDHDTRYDYADEYLQVIYKLLEGSWEDGAVLRDRERKI
FSDPRKIHPINHQGQFFSVPGIHLCEPSPQRTPVLYQAGASSRGKQFAAGHAECVFVAAPSKVLLKKTVADIRRRAAEAG
RDPHSILIFNLQTVIVGDTDREAQAKWQEYKQYVSYEGALALLSGWTGIDFGQYQPDQVLKYLHTNAIQSAVEAFSTADP
NRQWTVQALADWAGIGGFGPLVVGSAQTVADELQSWVEETDVDGFNLAYAVTHETFRDVVELLVPELQKRGVFKQEYREG
TLREKLFGGGPRLAAPHPGASYRRDARTAASVEEKVT
>Mature_516_residues
PLTWRRKRYSRSGSRRTPDVLRTEYLSFFSLIHFAACAPATGRAMEIAMSSQREIRLNAFDMNCVGHQSPGLWAHPRDRS
WQYKDLEYWVDLARLLERGKFDGLFIADVLGIYDVLNGSGDAAIRQATQVPVNDPLALITPMALVTEHLGFGLTASLSFE
HPYPFARRLSTLDHLTKGRVGWNIVTSYLESGARNIGQQTQTDHDTRYDYADEYLQVIYKLLEGSWEDGAVLRDRERKIF
SDPRKIHPINHQGQFFSVPGIHLCEPSPQRTPVLYQAGASSRGKQFAAGHAECVFVAAPSKVLLKKTVADIRRRAAEAGR
DPHSILIFNLQTVIVGDTDREAQAKWQEYKQYVSYEGALALLSGWTGIDFGQYQPDQVLKYLHTNAIQSAVEAFSTADPN
RQWTVQALADWAGIGGFGPLVVGSAQTVADELQSWVEETDVDGFNLAYAVTHETFRDVVELLVPELQKRGVFKQEYREGT
LREKLFGGGPRLAAPHPGASYRRDARTAASVEEKVT

Specific function: Part of a pathway to remove covalently bound sulfur from dibenzothiophene (DBT) without breaking carbon-carbon bonds. This enzyme metabolizes DBT-sulfone (DBTO2 or DBT 5,5-dioxide) to 2- hydroxybiphenyl (2-HBP) [H]

COG id: COG2141

COG function: function code C; Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the ntaA/snaA/soxA(dszA) monooxygenase family [H]

Homologues:

Organism=Escherichia coli, GI1787247, Length=223, Percent_Identity=28.6995515695067, Blast_Score=72, Evalue=1e-13,
Organism=Escherichia coli, GI1787166, Length=383, Percent_Identity=26.6318537859008, Blast_Score=70, Evalue=3e-13,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011251
- InterPro:   IPR016048
- InterPro:   IPR016215 [H]

Pfam domain/function: PF00296 Bac_luciferase [H]

EC number: NA

Molecular weight: Translated: 57947; Mature: 57816

Theoretical pI: Translated: 7.08; Mature: 7.08

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
1.0 %Met     (Translated Protein)
1.7 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
0.8 %Met     (Mature Protein)
1.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPLTWRRKRYSRSGSRRTPDVLRTEYLSFFSLIHFAACAPATGRAMEIAMSSQREIRLNA
CCCCCCHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEECCCCCEEEEEE
FDMNCVGHQSPGLWAHPRDRSWQYKDLEYWVDLARLLERGKFDGLFIADVLGIYDVLNGS
EECCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHCCC
GDAAIRQATQVPVNDPLALITPMALVTEHLGFGLTASLSFEHPYPFARRLSTLDHLTKGR
CCHHHHHHHCCCCCCCHHHHHHHHHHHHHHCCCEEEEECCCCCCHHHHHHHHHHHHHCCC
VGWNIVTSYLESGARNIGQQTQTDHDTRYDYADEYLQVIYKLLEGSWEDGAVLRDRERKI
CHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHH
FSDPRKIHPINHQGQFFSVPGIHLCEPSPQRTPVLYQAGASSRGKQFAAGHAECVFVAAP
HCCCCCCCCCCCCCCEEECCCEEECCCCCCCCCEEEECCCCCCCCCCCCCCCCEEEEECC
SKVLLKKTVADIRRRAAEAGRDPHSILIFNLQTVIVGDTDREAQAKWQEYKQYVSYEGAL
HHHHHHHHHHHHHHHHHHCCCCCCEEEEEEEEEEEEECCCHHHHHHHHHHHHHHHHCCHH
ALLSGWTGIDFGQYQPDQVLKYLHTNAIQSAVEAFSTADPNRQWTVQALADWAGIGGFGP
HHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHCCCCCCH
LVVGSAQTVADELQSWVEETDVDGFNLAYAVTHETFRDVVELLVPELQKRGVFKQEYREG
HHCCCHHHHHHHHHHHHHHCCCCCCEEEEEEHHHHHHHHHHHHHHHHHHCCCHHHHHHCC
TLREKLFGGGPRLAAPHPGASYRRDARTAASVEEKVT
HHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHCC
>Mature Secondary Structure 
PLTWRRKRYSRSGSRRTPDVLRTEYLSFFSLIHFAACAPATGRAMEIAMSSQREIRLNA
CCCCCHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEECCCCCEEEEEE
FDMNCVGHQSPGLWAHPRDRSWQYKDLEYWVDLARLLERGKFDGLFIADVLGIYDVLNGS
EECCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHCCC
GDAAIRQATQVPVNDPLALITPMALVTEHLGFGLTASLSFEHPYPFARRLSTLDHLTKGR
CCHHHHHHHCCCCCCCHHHHHHHHHHHHHHCCCEEEEECCCCCCHHHHHHHHHHHHHCCC
VGWNIVTSYLESGARNIGQQTQTDHDTRYDYADEYLQVIYKLLEGSWEDGAVLRDRERKI
CHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHH
FSDPRKIHPINHQGQFFSVPGIHLCEPSPQRTPVLYQAGASSRGKQFAAGHAECVFVAAP
HCCCCCCCCCCCCCCEEECCCEEECCCCCCCCCEEEECCCCCCCCCCCCCCCCEEEEECC
SKVLLKKTVADIRRRAAEAGRDPHSILIFNLQTVIVGDTDREAQAKWQEYKQYVSYEGAL
HHHHHHHHHHHHHHHHHHCCCCCCEEEEEEEEEEEEECCCHHHHHHHHHHHHHHHHCCHH
ALLSGWTGIDFGQYQPDQVLKYLHTNAIQSAVEAFSTADPNRQWTVQALADWAGIGGFGP
HHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHCCCCCCH
LVVGSAQTVADELQSWVEETDVDGFNLAYAVTHETFRDVVELLVPELQKRGVFKQEYREG
HHCCCHHHHHHHHHHHHHHCCCCCCEEEEEEHHHHHHHHHHHHHHHHHHCCCHHHHHHCC
TLREKLFGGGPRLAAPHPGASYRRDARTAASVEEKVT
HHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 7961424; 7574582 [H]