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The map label for this gene is soxC [H]

Identifier: 238896261

GI number: 238896261

Start: 4240611

End: 4241852

Strand: Reverse

Name: soxC [H]

Synonym: KP1_4419

Alternate gene names: 238896261

Gene position: 4241852-4240611 (Counterclockwise)

Preceding gene: 238896262

Following gene: 238896255

Centisome position: 80.82

GC content: 64.57

Gene sequence:

>1242_bases
ATGAATAAGGAACTGACAATGACCCTGCTCTCCACTGGCACCGATTATGACGCGCTGGCGGCCGCCTTCCGCCCGATATT
CACCCGTATCGCCCAGGGCGCTGCGGAGCGCGAACAGCAGCGCATTCTGCCCGATGAGCCGATCCGCTGGCTGAAAGAAG
CGGGCTTCGGCACGCTGCGTATCCCGCGCGAGAAGGGCGGCTGGGGCGCTTCGCTGCCGCAGCTCAGCGCGCTGCTGATC
GAGCTGGCGCAAGCGGACTCTAACCTGCCGCAGGCCCTGCGCGCGCACTTTGCCTTTGTGGAAGATCAGCTGAATCAGCC
GGATTCCGCCGGGCGCGACCGCTGGTTTCGTCGCTTCCTCGACGGTGAGCTGGTGGGCAGCGGCTGGACGGAGATCGGCG
CGGTTAAGCTGGGAGAGGTGAACACCAGAGTGACGCCGGCAGAGGGCGGCTGGCGACTCGACGGCGAGAAGTTTTACAGC
ACCGGCGCGCTGTACGCCGACTGGATCGATGTGTTTGCCCGGCGCAGTGATACCGCCAGCGATGTGATAGCCCTGGTCAG
CACCCAGCAGACCGGCGTGGTGCGGGAAGATGACTGGGATGGCTTTGGCCAGCGGTTGACCGGCAGCGGGACCACCCGCT
TTACCGGCGCTCGGGTGGAAACCGAACATGTCTATGATTTTGCCCAGCGCTTTCGCTATCAGACCGCCTTCTACCAGCAT
GTGCTGCTGGCGACCCTCGCGGGCATTGGCCTGGCGGTTGAGCGGGATGCCGCGCAGGGCGTCAAACATCGCTCCCGGAT
GTACAGCCACGGCAACGCCGCCGTGCCGCGCGATGACGCCCAGGTTCTGCAGGTCGTTGGGCAGATCAGCAGCTGGGCAT
GGGCGACCCGGGCCGCGGTCCTGCAGGCCGCGGAATCGCTGCAGCAGGCCTATGTGGCGCACGTCAGCGACGACGAAGCA
TTGATTGCCCGGCGTAACCAGCTGGCGGAAGTGGAAGCGGCGCAGGCGCAGGTGATCGCCAGCGACTGGATCCCGCGGGC
GGCGACGGAGCTGTTTAATGCCCTCGGGGCGTCGGATACGCGAACTCGCCTTGCGCTGGATCGCCACTGGCGCAATGCGC
GGACGGTTGCCTCGCATAATCCGGTGATTTATAAGGCACGTAATATCGGTAACTGGCTGGTGAACGGTGAAGCGCCCACC
TTTATCTGGCAGATAGGCAATGGTGAGAAAACGGCGGGGTAA

Upstream 100 bases:

>100_bases
ACGCAGATGTTCTGGGTGGTCTCGCTTGCCGCCATTATTCCCATTTTCTTCCTGCTGGCGGTCCGTCATGAACCGACGCG
AGAAGATATCGACGCACTTC

Downstream 100 bases:

>100_bases
GCCTGTCGGCGACGGGAGGCGCAGAGCTTCCCGTCGTCAGGAAAATCAAGGTTTATCCAGCGACCAGGTGGCGCTGCGCA
CGTCGACTTTCACCGGCAGC

Product: acyl-CoA dehydrogenase family protein

Products: NA

Alternate protein names: DBT sulfur dioxygenase [H]

Number of amino acids: Translated: 413; Mature: 413

Protein sequence:

>413_residues
MNKELTMTLLSTGTDYDALAAAFRPIFTRIAQGAAEREQQRILPDEPIRWLKEAGFGTLRIPREKGGWGASLPQLSALLI
ELAQADSNLPQALRAHFAFVEDQLNQPDSAGRDRWFRRFLDGELVGSGWTEIGAVKLGEVNTRVTPAEGGWRLDGEKFYS
TGALYADWIDVFARRSDTASDVIALVSTQQTGVVREDDWDGFGQRLTGSGTTRFTGARVETEHVYDFAQRFRYQTAFYQH
VLLATLAGIGLAVERDAAQGVKHRSRMYSHGNAAVPRDDAQVLQVVGQISSWAWATRAAVLQAAESLQQAYVAHVSDDEA
LIARRNQLAEVEAAQAQVIASDWIPRAATELFNALGASDTRTRLALDRHWRNARTVASHNPVIYKARNIGNWLVNGEAPT
FIWQIGNGEKTAG

Sequences:

>Translated_413_residues
MNKELTMTLLSTGTDYDALAAAFRPIFTRIAQGAAEREQQRILPDEPIRWLKEAGFGTLRIPREKGGWGASLPQLSALLI
ELAQADSNLPQALRAHFAFVEDQLNQPDSAGRDRWFRRFLDGELVGSGWTEIGAVKLGEVNTRVTPAEGGWRLDGEKFYS
TGALYADWIDVFARRSDTASDVIALVSTQQTGVVREDDWDGFGQRLTGSGTTRFTGARVETEHVYDFAQRFRYQTAFYQH
VLLATLAGIGLAVERDAAQGVKHRSRMYSHGNAAVPRDDAQVLQVVGQISSWAWATRAAVLQAAESLQQAYVAHVSDDEA
LIARRNQLAEVEAAQAQVIASDWIPRAATELFNALGASDTRTRLALDRHWRNARTVASHNPVIYKARNIGNWLVNGEAPT
FIWQIGNGEKTAG
>Mature_413_residues
MNKELTMTLLSTGTDYDALAAAFRPIFTRIAQGAAEREQQRILPDEPIRWLKEAGFGTLRIPREKGGWGASLPQLSALLI
ELAQADSNLPQALRAHFAFVEDQLNQPDSAGRDRWFRRFLDGELVGSGWTEIGAVKLGEVNTRVTPAEGGWRLDGEKFYS
TGALYADWIDVFARRSDTASDVIALVSTQQTGVVREDDWDGFGQRLTGSGTTRFTGARVETEHVYDFAQRFRYQTAFYQH
VLLATLAGIGLAVERDAAQGVKHRSRMYSHGNAAVPRDDAQVLQVVGQISSWAWATRAAVLQAAESLQQAYVAHVSDDEA
LIARRNQLAEVEAAQAQVIASDWIPRAATELFNALGASDTRTRLALDRHWRNARTVASHNPVIYKARNIGNWLVNGEAPT
FIWQIGNGEKTAG

Specific function: Part of a pathway to remove covalently bound sulfur from dibenzothiophene (DBT) without breaking carbon-carbon bonds. Sulfur dioxygenase which converts DBT to DBT-sulfone (DBTO2 or DBT 5,5-dioxide) [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR013107
- InterPro:   IPR006092
- InterPro:   IPR006091
- InterPro:   IPR009075
- InterPro:   IPR013786
- InterPro:   IPR009100 [H]

Pfam domain/function: PF08028 Acyl-CoA_dh_2; PF02770 Acyl-CoA_dh_M; PF02771 Acyl-CoA_dh_N [H]

EC number: NA

Molecular weight: Translated: 45621; Mature: 45621

Theoretical pI: Translated: 6.33; Mature: 6.33

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
0.7 %Met     (Translated Protein)
0.7 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
0.7 %Met     (Mature Protein)
0.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNKELTMTLLSTGTDYDALAAAFRPIFTRIAQGAAEREQQRILPDEPIRWLKEAGFGTLR
CCCCEEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHCCCCEEE
IPREKGGWGASLPQLSALLIELAQADSNLPQALRAHFAFVEDQLNQPDSAGRDRWFRRFL
ECCCCCCCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHH
DGELVGSGWTEIGAVKLGEVNTRVTPAEGGWRLDGEKFYSTGALYADWIDVFARRSDTAS
CCCEECCCCCHHCCEEECCCCCEEECCCCCEECCCHHHHHCCCHHHHHHHHHHHCCCCHH
DVIALVSTQQTGVVREDDWDGFGQRLTGSGTTRFTGARVETEHVYDFAQRFRYQTAFYQH
HHHHHHCCCCCCCEECCCCCCCCCEECCCCCCEECCCCCCHHHHHHHHHHHHHHHHHHHH
VLLATLAGIGLAVERDAAQGVKHRSRMYSHGNAAVPRDDAQVLQVVGQISSWAWATRAAV
HHHHHHHHCCCEEEHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHH
LQAAESLQQAYVAHVSDDEALIARRNQLAEVEAAQAQVIASDWIPRAATELFNALGASDT
HHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCCC
RTRLALDRHWRNARTVASHNPVIYKARNIGNWLVNGEAPTFIWQIGNGEKTAG
HHHHHHHHHHCCCCCCCCCCCEEEEECCCCCEEECCCCCEEEEEECCCCCCCC
>Mature Secondary Structure
MNKELTMTLLSTGTDYDALAAAFRPIFTRIAQGAAEREQQRILPDEPIRWLKEAGFGTLR
CCCCEEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHCCCCEEE
IPREKGGWGASLPQLSALLIELAQADSNLPQALRAHFAFVEDQLNQPDSAGRDRWFRRFL
ECCCCCCCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHH
DGELVGSGWTEIGAVKLGEVNTRVTPAEGGWRLDGEKFYSTGALYADWIDVFARRSDTAS
CCCEECCCCCHHCCEEECCCCCEEECCCCCEECCCHHHHHCCCHHHHHHHHHHHCCCCHH
DVIALVSTQQTGVVREDDWDGFGQRLTGSGTTRFTGARVETEHVYDFAQRFRYQTAFYQH
HHHHHHCCCCCCCEECCCCCCCCCEECCCCCCEECCCCCCHHHHHHHHHHHHHHHHHHHH
VLLATLAGIGLAVERDAAQGVKHRSRMYSHGNAAVPRDDAQVLQVVGQISSWAWATRAAV
HHHHHHHHCCCEEEHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHH
LQAAESLQQAYVAHVSDDEALIARRNQLAEVEAAQAQVIASDWIPRAATELFNALGASDT
HHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCCC
RTRLALDRHWRNARTVASHNPVIYKARNIGNWLVNGEAPTFIWQIGNGEKTAG
HHHHHHHHHHCCCCCCCCCCCEEEEECCCCCEEECCCCCEEEEEECCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 7961424; 7574582 [H]