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The map label for this gene is ygaM [H]

Identifier: 238896125

GI number: 238896125

Start: 4096147

End: 4096494

Strand: Direct

Name: ygaM [H]

Synonym: KP1_4264

Alternate gene names: 238896125

Gene position: 4096147-4096494 (Clockwise)

Preceding gene: 238896123

Following gene: 238896127

Centisome position: 78.04

GC content: 56.61

Gene sequence:

>348_bases
ATGGCTAACCATGTGAACCGCAACAATTTTGACGAGAACGCCGAAGATATTCATAACGATGTCAGCCAATTAGCGGATAC
GCTGGAAGAGGTGCTGAAATCATGGGGCAGTGACGCCAAAGAGGAAGCGGAAGCGGCGCGTGTCAAAGCGCAGTCGCTGT
TAAAAGAGACTCGTGCCCGTCTTAATGGCCACAACCGGGTGCAGCAGGCGGCGCTGGATGCGCGCCAGGCAGCGTGCGAT
GCGCTGGGCTGTGCCGATACCTACGTGCGCAATAAACCGTGGCACAGTGTGGGCGCCGCCGCCGCCGTCGGGGTATTTAT
TGGCGTATTGCTCAATTTACGTCGATAA

Upstream 100 bases:

>100_bases
AAGGACAGTGCTTTCGGAAAATTCCAGAAACCACAACAGTAAGCATAATTCAAAATCTTGTCCTACACTTACTCACTCGA
TGGAATTAAGGGAGATAACG

Downstream 100 bases:

>100_bases
TAGCTTAAGCATCGGCTGCCGCCGCGCGATTGGCGCGCGGTAGCCCGCGAGCTTTACGGAAGGCAATGAAGATAACAAAT
ACGCGTCAGCCCCTGCGCGC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 115; Mature: 114

Protein sequence:

>115_residues
MANHVNRNNFDENAEDIHNDVSQLADTLEEVLKSWGSDAKEEAEAARVKAQSLLKETRARLNGHNRVQQAALDARQAACD
ALGCADTYVRNKPWHSVGAAAAVGVFIGVLLNLRR

Sequences:

>Translated_115_residues
MANHVNRNNFDENAEDIHNDVSQLADTLEEVLKSWGSDAKEEAEAARVKAQSLLKETRARLNGHNRVQQAALDARQAACD
ALGCADTYVRNKPWHSVGAAAAVGVFIGVLLNLRR
>Mature_114_residues
ANHVNRNNFDENAEDIHNDVSQLADTLEEVLKSWGSDAKEEAEAARVKAQSLLKETRARLNGHNRVQQAALDARQAACDA
LGCADTYVRNKPWHSVGAAAAVGVFIGVLLNLRR

Specific function: Unknown

COG id: COG4575

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: To E.coli elaB and yqjD [H]

Homologues:

Organism=Escherichia coli, GI1789027, Length=115, Percent_Identity=65.2173913043478, Blast_Score=151, Evalue=8e-39,
Organism=Escherichia coli, GI1789485, Length=104, Percent_Identity=42.3076923076923, Blast_Score=71, Evalue=2e-14,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR010279 [H]

Pfam domain/function: PF05957 DUF883 [H]

EC number: NA

Molecular weight: Translated: 12578; Mature: 12447

Theoretical pI: Translated: 6.51; Mature: 6.51

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.7 %Cys     (Translated Protein)
0.9 %Met     (Translated Protein)
2.6 %Cys+Met (Translated Protein)
1.8 %Cys     (Mature Protein)
0.0 %Met     (Mature Protein)
1.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MANHVNRNNFDENAEDIHNDVSQLADTLEEVLKSWGSDAKEEAEAARVKAQSLLKETRAR
CCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHH
LNGHNRVQQAALDARQAACDALGCADTYVRNKPWHSVGAAAAVGVFIGVLLNLRR
HCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure 
ANHVNRNNFDENAEDIHNDVSQLADTLEEVLKSWGSDAKEEAEAARVKAQSLLKETRAR
CCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHH
LNGHNRVQQAALDARQAACDALGCADTYVRNKPWHSVGAAAAVGVFIGVLLNLRR
HCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]