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The map label for this gene is ygaC [H]

Identifier: 238896124

GI number: 238896124

Start: 4095635

End: 4095997

Strand: Reverse

Name: ygaC [H]

Synonym: KP1_4263

Alternate gene names: 238896124

Gene position: 4095997-4095635 (Counterclockwise)

Preceding gene: 238896126

Following gene: 238896122

Centisome position: 78.04

GC content: 49.59

Gene sequence:

>363_bases
ATGTATTTAAGACCCGATGAGGTGGCGCGTGTTCTTGAAAAAGCCGGCTTCACCATGGATGTTGTGACGCAAAAAGCGTA
CGGCTATCGCCGCGGCGATAATTATGTTTATGTGAACCGCGAAGCGCGCATGGGGCGAACAGCGTTAGTTATTCATCCGG
CGTTAAAAGAGCGCAGCAATATGCTGGCCGAACCGGCTTCAGATATCAAAACCTGTGATCATTATGAACAGTTTCCGCTG
TATTTAGCCGGGGATGCGCAACAACATTATGGTATTCCGCATGGATTTAGCTCACGCATGGCGCTTGAGCGTTTTCTGAA
TGGGCTATTTGGCGAAGCCCAGCCGGCAATGTCGACGAATTAA

Upstream 100 bases:

>100_bases
GAATTATGCTTACTGTTGTGGTTTCTGGAATTTTCCGAAAGCACTGTCCTTAATGAATAAGGTAAGGTCAATGTGCGGTA
AAAGATAACGAGGAATCAGT

Downstream 100 bases:

>100_bases
TACGCCGATAGGCATGTAAGGATCCAGGCGAGGCGGGCTGGCGGGAAGAGGCGACTGGCAGAGCCAGTCGCTGCTAACGC
GTTGGTCAGGCCTTCGCCTG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 120; Mature: 120

Protein sequence:

>120_residues
MYLRPDEVARVLEKAGFTMDVVTQKAYGYRRGDNYVYVNREARMGRTALVIHPALKERSNMLAEPASDIKTCDHYEQFPL
YLAGDAQQHYGIPHGFSSRMALERFLNGLFGEAQPAMSTN

Sequences:

>Translated_120_residues
MYLRPDEVARVLEKAGFTMDVVTQKAYGYRRGDNYVYVNREARMGRTALVIHPALKERSNMLAEPASDIKTCDHYEQFPL
YLAGDAQQHYGIPHGFSSRMALERFLNGLFGEAQPAMSTN
>Mature_120_residues
MYLRPDEVARVLEKAGFTMDVVTQKAYGYRRGDNYVYVNREARMGRTALVIHPALKERSNMLAEPASDIKTCDHYEQFPL
YLAGDAQQHYGIPHGFSSRMALERFLNGLFGEAQPAMSTN

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI1789026, Length=113, Percent_Identity=88.4955752212389, Blast_Score=216, Evalue=3e-58,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR018994 [H]

Pfam domain/function: PF09400 DUF2002 [H]

EC number: NA

Molecular weight: Translated: 13634; Mature: 13634

Theoretical pI: Translated: 7.66; Mature: 7.66

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
5.0 %Met     (Translated Protein)
5.8 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
5.0 %Met     (Mature Protein)
5.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MYLRPDEVARVLEKAGFTMDVVTQKAYGYRRGDNYVYVNREARMGRTALVIHPALKERSN
CCCCHHHHHHHHHHCCCCHHHHHHHHCCEECCCCEEEECCCCCCCCEEEEEEHHHHHHHH
MLAEPASDIKTCDHYEQFPLYLAGDAQQHYGIPHGFSSRMALERFLNGLFGEAQPAMSTN
HHCCCHHHHHHHCCHHHCCEEEECCCHHHCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCC
>Mature Secondary Structure
MYLRPDEVARVLEKAGFTMDVVTQKAYGYRRGDNYVYVNREARMGRTALVIHPALKERSN
CCCCHHHHHHHHHHCCCCHHHHHHHHCCEECCCCEEEECCCCCCCCEEEEEEHHHHHHHH
MLAEPASDIKTCDHYEQFPLYLAGDAQQHYGIPHGFSSRMALERFLNGLFGEAQPAMSTN
HHCCCHHHHHHHCCHHHCCEEEECCCHHHCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]