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The map label for this gene is ygaP [H]

Identifier: 238896118

GI number: 238896118

Start: 4092084

End: 4092629

Strand: Direct

Name: ygaP [H]

Synonym: KP1_4257

Alternate gene names: 238896118

Gene position: 4092084-4092629 (Clockwise)

Preceding gene: 238896117

Following gene: 238896120

Centisome position: 77.97

GC content: 65.02

Gene sequence:

>546_bases
ATGACCATCGCCACCTTAACTCCCGCCGAGGCCCAGGCGCAGATTGCCCAGGGCGCCAGACTGATTGATATCCGCGATGC
GGATGAATATGCGCGCGAACATATCCCCGATGCCGAGCTGGTGCCGCTCGCCACTCTGACCAGCGGTGCGCCCCTCAATG
CCCGGGCCGGAGAGACGGTCATCTTTCACTGCCAGGCGGGTTCCCGGACGCAGAATAATGCGATTCGTCTGGCCGCGGCC
GCCGCGCCGGCGCAGCCCTGCCTGCTGGCAGGAGGAATTCAGGCGTGGAAAGCCGCGGGGTTGCCGGTAGTGGAAGATTC
ATCGCAGCCGCTGCCGCTGATGCGCCAGGTGCAAATTGCCGCTGGCGTCCTGATTTTACTGGGAGTGCTGCTGGGCTATA
CCGTTAACGGCGGCTTTTTCCTGCTCAGCGGCGCGGTCGGCGCCGGGCTCACCTTCGCCGGCGTAACCGGCTTTTGCGGC
ATGGCGCGTCTGCTGGCGACCATGCCGTGGAACCGGCGCCAGGGGGTTAAAACGCGCTCCAGATAA

Upstream 100 bases:

>100_bases
AGCGAGCGCGACGCCCAGCGTATCCACTATTTCATTACTCACCCTGCGGTACAGCAGGTGATCAATACGCTGAAAACGCT
CTATTGCCCGTGAGGATCCT

Downstream 100 bases:

>100_bases
GCCAGGCAATGCCGCCGAAGAGCAGCCATTTGACGATGTAATAGACCGTCTTATTCCATTTTTTCAACCGCTTACCAACA
ATACGGATCTGGTAAATATA

Product: putative phosphatase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 181; Mature: 180

Protein sequence:

>181_residues
MTIATLTPAEAQAQIAQGARLIDIRDADEYAREHIPDAELVPLATLTSGAPLNARAGETVIFHCQAGSRTQNNAIRLAAA
AAPAQPCLLAGGIQAWKAAGLPVVEDSSQPLPLMRQVQIAAGVLILLGVLLGYTVNGGFFLLSGAVGAGLTFAGVTGFCG
MARLLATMPWNRRQGVKTRSR

Sequences:

>Translated_181_residues
MTIATLTPAEAQAQIAQGARLIDIRDADEYAREHIPDAELVPLATLTSGAPLNARAGETVIFHCQAGSRTQNNAIRLAAA
AAPAQPCLLAGGIQAWKAAGLPVVEDSSQPLPLMRQVQIAAGVLILLGVLLGYTVNGGFFLLSGAVGAGLTFAGVTGFCG
MARLLATMPWNRRQGVKTRSR
>Mature_180_residues
TIATLTPAEAQAQIAQGARLIDIRDADEYAREHIPDAELVPLATLTSGAPLNARAGETVIFHCQAGSRTQNNAIRLAAAA
APAQPCLLAGGIQAWKAAGLPVVEDSSQPLPLMRQVQIAAGVLILLGVLLGYTVNGGFFLLSGAVGAGLTFAGVTGFCGM
ARLLATMPWNRRQGVKTRSR

Specific function: Unknown

COG id: COG0607

COG function: function code P; Rhodanese-related sulfurtransferase

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: To Synechocystis PCC 6803 slr1261 [H]

Homologues:

Organism=Escherichia coli, GI1789022, Length=174, Percent_Identity=68.3908045977011, Blast_Score=238, Evalue=2e-64,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR021309
- InterPro:   IPR001763 [H]

Pfam domain/function: PF11127 DUF2892; PF00581 Rhodanese [H]

EC number: NA

Molecular weight: Translated: 18799; Mature: 18668

Theoretical pI: Translated: 8.92; Mature: 8.92

Prosite motif: PS50206 RHODANESE_3

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.7 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
3.9 %Cys+Met (Translated Protein)
1.7 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
3.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTIATLTPAEAQAQIAQGARLIDIRDADEYAREHIPDAELVPLATLTSGAPLNARAGETV
CEEECCCCHHHHHHHHCCCEEEEECCHHHHHHHCCCCCCCEEEEEECCCCCCCCCCCCEE
IFHCQAGSRTQNNAIRLAAAAAPAQPCLLAGGIQAWKAAGLPVVEDSSQPLPLMRQVQIA
EEEECCCCCCCCCEEEEEECCCCCCCEEECCCHHHHHHCCCCEEECCCCCCHHHHHHHHH
AGVLILLGVLLGYTVNGGFFLLSGAVGAGLTFAGVTGFCGMARLLATMPWNRRQGVKTRS
HHHHHHHHHHHHCCCCCCEEEEECCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCC
R
C
>Mature Secondary Structure 
TIATLTPAEAQAQIAQGARLIDIRDADEYAREHIPDAELVPLATLTSGAPLNARAGETV
EEECCCCHHHHHHHHCCCEEEEECCHHHHHHHCCCCCCCEEEEEECCCCCCCCCCCCEE
IFHCQAGSRTQNNAIRLAAAAAPAQPCLLAGGIQAWKAAGLPVVEDSSQPLPLMRQVQIA
EEEECCCCCCCCCEEEEEECCCCCCCEEECCCHHHHHHCCCCEEECCCCCCHHHHHHHHH
AGVLILLGVLLGYTVNGGFFLLSGAVGAGLTFAGVTGFCGMARLLATMPWNRRQGVKTRS
HHHHHHHHHHHHCCCCCCEEEEECCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCC
R
C

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9278503; 1480493 [H]