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The map label for this gene is rnfH

Identifier: 238896063

GI number: 238896063

Start: 4030877

End: 4031167

Strand: Reverse

Name: rnfH

Synonym: KP1_4196

Alternate gene names: 238896063

Gene position: 4031167-4030877 (Counterclockwise)

Preceding gene: 238896064

Following gene: 238896059

Centisome position: 76.81

GC content: 58.76

Gene sequence:

>291_bases
GTGCCGGCTAATATTCGTGTTGAAGTCGCCTACGCGCTGCCTGAAAAGCAGTATCTGCAGCGGGTCACCCTGGACGAGGG
GGCGACGGTCGAGCAGGCGATTATCGCCAGCGGTCTGCTGGCGCTGCGTGATGACATCGATCTGGCGAAAAACAAGCTGG
GTATCTACAGTCGTCCGGTAAAGCTGCATGACGAAGTTCACGACGGCGACCGGGTGGAAATCTATCGTCCGCTGATCGCA
GACCCGAAAGAGCTGCGTCGCCAGCGGGCAGAGAAAAGCGCCGCAAAGTAA

Upstream 100 bases:

>100_bases
TTTACCAATAAACTGATTGAGATGGCTTTTGGCCGGATCTTCAAAGAGCTGGCCGCTAACATGGTGCAGGCGTTCACTTC
GCGCGCCAAAGAGGTTTACA

Downstream 100 bases:

>100_bases
CCCGCAGCAGACCGACTATCAGCCATAAAAAAAGCGCTCATCGAGCGCTTTTTGCTTTTCCGGGCCTTACTGACTGGTCA
GCGCAGGCTTGTTATCAATG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 96; Mature: 95

Protein sequence:

>96_residues
MPANIRVEVAYALPEKQYLQRVTLDEGATVEQAIIASGLLALRDDIDLAKNKLGIYSRPVKLHDEVHDGDRVEIYRPLIA
DPKELRRQRAEKSAAK

Sequences:

>Translated_96_residues
MPANIRVEVAYALPEKQYLQRVTLDEGATVEQAIIASGLLALRDDIDLAKNKLGIYSRPVKLHDEVHDGDRVEIYRPLIA
DPKELRRQRAEKSAAK
>Mature_95_residues
PANIRVEVAYALPEKQYLQRVTLDEGATVEQAIIASGLLALRDDIDLAKNKLGIYSRPVKLHDEVHDGDRVEIYRPLIAD
PKELRRQRAEKSAAK

Specific function: Unknown

COG id: COG2914

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0125 (rnfH) family

Homologues:

Organism=Escherichia coli, GI87082139, Length=96, Percent_Identity=85.4166666666667, Blast_Score=162, Evalue=3e-42,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): RNFH_KLEP3 (B5XVJ5)

Other databases:

- EMBL:   CP000964
- RefSeq:   YP_002237044.1
- ProteinModelPortal:   B5XVJ5
- SMR:   B5XVJ5
- GeneID:   6935495
- GenomeReviews:   CP000964_GR
- KEGG:   kpe:KPK_1180
- HOGENOM:   HBG700644
- OMA:   PKDVRRK
- ProtClustDB:   CLSK2400832
- HAMAP:   MF_00460
- InterPro:   IPR005346

Pfam domain/function: PF03658 UPF0125

EC number: NA

Molecular weight: Translated: 10835; Mature: 10703

Theoretical pI: Translated: 7.68; Mature: 7.68

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.0 %Met     (Translated Protein)
1.0 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
0.0 %Met     (Mature Protein)
0.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPANIRVEVAYALPEKQYLQRVTLDEGATVEQAIIASGLLALRDDIDLAKNKLGIYSRPV
CCCCEEEEEEEECCHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCE
KLHDEVHDGDRVEIYRPLIADPKELRRQRAEKSAAK
ECCCCCCCCCEEEEECCCCCCHHHHHHHHHHHCCCC
>Mature Secondary Structure 
PANIRVEVAYALPEKQYLQRVTLDEGATVEQAIIASGLLALRDDIDLAKNKLGIYSRPV
CCCEEEEEEEECCHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCE
KLHDEVHDGDRVEIYRPLIADPKELRRQRAEKSAAK
ECCCCCCCCCEEEEECCCCCCHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA