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The map label for this gene is yfiC [C]

Identifier: 238896026

GI number: 238896026

Start: 3987947

End: 3988705

Strand: Reverse

Name: yfiC [C]

Synonym: KP1_4157

Alternate gene names: 238896026

Gene position: 3988705-3987947 (Counterclockwise)

Preceding gene: 238896028

Following gene: 238896024

Centisome position: 76.0

GC content: 59.55

Gene sequence:

>759_bases
TTGTCGGCAAGGTTATTGAGGATGTCTCAGTCGAAGTTTGCGCTGCCGCGCAATGGTTTTACCTTCAAACGGTTCTTTGT
CGCTCACGATCGCTGCGCCATGAAGGTGGGTACCGACGGCATTTTGCTGGGCGCCTGGGCGCCGATTGCCGGAGTGAAGC
ATGTGCTGGATATTGGCGCGGGCAGCGGCTTGCTGGCGCTGATGCTCGCGCAGCGTACCGGAGATGATGTGCATGTCGAG
GCGGTAGAACTGGACGAAGAGGCCGCCGCTCAGGCGCGGGAAAACGCCCTCGCGTCGCCGTGGGCTTCGCGGATTGAGGT
CTGGCAGGCCGATATTCATCAGTGGCAGCCGTCGCAAACTCGACGCTATGAACTGATAATCAGTAATCCGCCCTTTTTTG
CCGAAGGCGTGCCATGCGCGACCTCGCAGCGAGAGCAGGCGCGGTACACCACTACGCTCGATCACGCCTCCCTGCTGACC
TGTGCCGCAGAGCATATTACCGAAGAAGGTTTTTTTTGCGTGGTGTTGCCGGTGGATATTGGTAATGCGTTCATCGAACG
GGCAAGGGCGATGGGCTGGCATCTGCGACTGCGTACTGACGTGGCGGAGACCGAGCTGCGACCGCCGCATCGGGTGCTGC
TGGCTTTCTCCCCGACGGCAGGGGAGTGTTTCAGCGACAGGCTGGCGATCCGCGGGCCAGAGCAGCAATATTCGGAAGGC
TTTACCGCTCTGACCGAGGACTTTTATCTCTTTATGTGA

Upstream 100 bases:

>100_bases
TGAGTGGGCCGCCGATTATAGACGTTACTGACGTAATGTTCATCTGTTTGTAAGGCTATCTGTTCTCCGGTATTGTGCAT
AGCCTTAGGTTCAGGAGTTT

Downstream 100 bases:

>100_bases
GCCAGGGGCGAGAGTATCGACGGGCCGCTGTCAGGCAGCGGCTGCGGATAGTCGAGGGTATAATGCAGACCGCGGCTCTC
CTTACGCAACATCGCGCAGC

Product: putative enzyme

Products: NA

Alternate protein names: tRNA m6A37 methyltransferase [H]

Number of amino acids: Translated: 252; Mature: 251

Protein sequence:

>252_residues
MSARLLRMSQSKFALPRNGFTFKRFFVAHDRCAMKVGTDGILLGAWAPIAGVKHVLDIGAGSGLLALMLAQRTGDDVHVE
AVELDEEAAAQARENALASPWASRIEVWQADIHQWQPSQTRRYELIISNPPFFAEGVPCATSQREQARYTTTLDHASLLT
CAAEHITEEGFFCVVLPVDIGNAFIERARAMGWHLRLRTDVAETELRPPHRVLLAFSPTAGECFSDRLAIRGPEQQYSEG
FTALTEDFYLFM

Sequences:

>Translated_252_residues
MSARLLRMSQSKFALPRNGFTFKRFFVAHDRCAMKVGTDGILLGAWAPIAGVKHVLDIGAGSGLLALMLAQRTGDDVHVE
AVELDEEAAAQARENALASPWASRIEVWQADIHQWQPSQTRRYELIISNPPFFAEGVPCATSQREQARYTTTLDHASLLT
CAAEHITEEGFFCVVLPVDIGNAFIERARAMGWHLRLRTDVAETELRPPHRVLLAFSPTAGECFSDRLAIRGPEQQYSEG
FTALTEDFYLFM
>Mature_251_residues
SARLLRMSQSKFALPRNGFTFKRFFVAHDRCAMKVGTDGILLGAWAPIAGVKHVLDIGAGSGLLALMLAQRTGDDVHVEA
VELDEEAAAQARENALASPWASRIEVWQADIHQWQPSQTRRYELIISNPPFFAEGVPCATSQREQARYTTTLDHASLLTC
AAEHITEEGFFCVVLPVDIGNAFIERARAMGWHLRLRTDVAETELRPPHRVLLAFSPTAGECFSDRLAIRGPEQQYSEGF
TALTEDFYLFM

Specific function: Specifically methylates the adenine in position 37 of tRNA(Val) [H]

COG id: COG4123

COG function: function code R; Predicted O-methyltransferase

Gene ontology:

Cell location: Cytoplasm (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the methyltransferase superfamily. tRNA (adenine-N(6)-)-methyltransferase family [H]

Homologues:

Organism=Escherichia coli, GI87082131, Length=245, Percent_Identity=76.734693877551, Blast_Score=388, Evalue=1e-109,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002052
- InterPro:   IPR007848
- InterPro:   IPR022882 [H]

Pfam domain/function: PF05175 MTS [H]

EC number: =2.1.1.55 [H]

Molecular weight: Translated: 28080; Mature: 27949

Theoretical pI: Translated: 5.85; Mature: 5.85

Prosite motif: PS00092 N6_MTASE

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.0 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
4.4 %Cys+Met (Translated Protein)
2.0 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
4.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSARLLRMSQSKFALPRNGFTFKRFFVAHDRCAMKVGTDGILLGAWAPIAGVKHVLDIGA
CCCCEEEECCCCCCCCCCCCEEEEEEEECCCEEEEECCCCEEEECCCCHHHHHHHHHCCC
GSGLLALMLAQRTGDDVHVEAVELDEEAAAQARENALASPWASRIEVWQADIHQWQPSQT
CCHHHHHHHHHCCCCCEEEEEEECCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCCC
RRYELIISNPPFFAEGVPCATSQREQARYTTTLDHASLLTCAAEHITEEGFFCVVLPVDI
CEEEEEECCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEECC
GNAFIERARAMGWHLRLRTDVAETELRPPHRVLLAFSPTAGECFSDRLAIRGPEQQYSEG
CHHHHHHHHHCCEEEEEECCHHHHCCCCCCEEEEEECCCCCCHHHCCEEECCCHHHHHCC
FTALTEDFYLFM
HHHHHCCEEEEC
>Mature Secondary Structure 
SARLLRMSQSKFALPRNGFTFKRFFVAHDRCAMKVGTDGILLGAWAPIAGVKHVLDIGA
CCCEEEECCCCCCCCCCCCEEEEEEEECCCEEEEECCCCEEEECCCCHHHHHHHHHCCC
GSGLLALMLAQRTGDDVHVEAVELDEEAAAQARENALASPWASRIEVWQADIHQWQPSQT
CCHHHHHHHHHCCCCCEEEEEEECCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCCC
RRYELIISNPPFFAEGVPCATSQREQARYTTTLDHASLLTCAAEHITEEGFFCVVLPVDI
CEEEEEECCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEECC
GNAFIERARAMGWHLRLRTDVAETELRPPHRVLLAFSPTAGECFSDRLAIRGPEQQYSEG
CHHHHHHHHHCCEEEEEECCHHHHCCCCCCEEEEEECCCCCCHHHCCEEECCCHHHHHCC
FTALTEDFYLFM
HHHHHCCEEEEC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA