Click here to switch to the map view.

The map label for this gene is rseB [H]

Identifier: 238896022

GI number: 238896022

Start: 3983708

End: 3984664

Strand: Reverse

Name: rseB [H]

Synonym: KP1_4152

Alternate gene names: 238896022

Gene position: 3984664-3983708 (Counterclockwise)

Preceding gene: 238896023

Following gene: 238896021

Centisome position: 75.92

GC content: 59.14

Gene sequence:

>957_bases
ATGAAGCAACTTTGGTGTGCCATGTCGCTCATGGCAGGCAGCCTGTTGTTCTCTGTCAACGCCTCGGCTGATACATCGTC
CGGGGCGTTGTTGCAGCAGATGAACCTGGCCAGCCAGTCTCTCAATTATGAGCTGTCTTTTGTTAGCATCAGCAAACAAG
GCGTTGAGTCGCTGCGCTATCGTCACGCGCGACTGAACAACCAACCGCTGGCGCAGTTGCTGCAGCTGGACGGTCCGCGC
CGGGAAGTGGTCCTGCGCGGCACGGAAATCAGCTATTTTGAACCCGGTCTCGATCCGTTCACCCTGAACGGCGACTATAT
CGTCGATTCGCTGCCATCGCTGGTATATAGCGATTTCAAACGCCTCTCCGCGGCGTATGATTTTATCTCCGTGGGCCGTA
CCCGTATCGCTGACCGCCTCTGCGACGTGATCCGCGTCGTGGCTCGCGACGGCACGCGCTACAGCTTTATCGCCTGGCTG
GATGCTGAAACCAAGCTGCCGCTGCGCGTCGATTTGCTCGACCGCGACGGGGAAACGCTGGAGCAGTTCCGGGTCGTCTC
CTTCAACGTTGGCGATAACGTCAGCGCCAGCATGGAGACGCTGGCAAAAGCGAATTTGCCGCCGCAGCTGTCGGTGCCTG
AAGGAGGCGACAAAGCTAACTTCAACTGGGCGCCGACGTGGCTCCCGCAGGGCGTGACTGAGGTTTCCAGCAGCCAGCGC
CGTCTTCCCACCTTTGACGGTCCGGTAGAATCACGTCTCTATTCCGACGGCTTGTTCAGCTTCTCGATCAATATCAACCG
CGCCACGGCGGCCAGCAGCGACCAGCTGTTGCGCACCGGCCGACGCACCGTCAGCACGACTGTGCGCGATAACGCGGAGA
TAACCGTAGTGGGCGAGCTGCCGCCGCAGACGGCGAAGCGTATCTCTGACAGTATTAAATTCAAGGCAGTACAATGA

Upstream 100 bases:

>100_bases
GCCGCCTGCACGCTGAGCAGCTTCAGTTTGGCCAGGCCCAGACTCAGCAGGCCGCAGTCCAGGTACCGGGCTATCAAACT
TTAGGAACGCAATCGCAGTA

Downstream 100 bases:

>100_bases
TTAAAGAGTGGGCTACCGTGGTTTCCTGGCATAACGGCGTGGCGCAGGTGCACTGCGACGTTAAAGCCTCCTGCAGCAGC
TGCGCCTCCCGTGCCGGCTG

Product: periplasmic negative regulator of sigmaE

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 318; Mature: 318

Protein sequence:

>318_residues
MKQLWCAMSLMAGSLLFSVNASADTSSGALLQQMNLASQSLNYELSFVSISKQGVESLRYRHARLNNQPLAQLLQLDGPR
REVVLRGTEISYFEPGLDPFTLNGDYIVDSLPSLVYSDFKRLSAAYDFISVGRTRIADRLCDVIRVVARDGTRYSFIAWL
DAETKLPLRVDLLDRDGETLEQFRVVSFNVGDNVSASMETLAKANLPPQLSVPEGGDKANFNWAPTWLPQGVTEVSSSQR
RLPTFDGPVESRLYSDGLFSFSININRATAASSDQLLRTGRRTVSTTVRDNAEITVVGELPPQTAKRISDSIKFKAVQ

Sequences:

>Translated_318_residues
MKQLWCAMSLMAGSLLFSVNASADTSSGALLQQMNLASQSLNYELSFVSISKQGVESLRYRHARLNNQPLAQLLQLDGPR
REVVLRGTEISYFEPGLDPFTLNGDYIVDSLPSLVYSDFKRLSAAYDFISVGRTRIADRLCDVIRVVARDGTRYSFIAWL
DAETKLPLRVDLLDRDGETLEQFRVVSFNVGDNVSASMETLAKANLPPQLSVPEGGDKANFNWAPTWLPQGVTEVSSSQR
RLPTFDGPVESRLYSDGLFSFSININRATAASSDQLLRTGRRTVSTTVRDNAEITVVGELPPQTAKRISDSIKFKAVQ
>Mature_318_residues
MKQLWCAMSLMAGSLLFSVNASADTSSGALLQQMNLASQSLNYELSFVSISKQGVESLRYRHARLNNQPLAQLLQLDGPR
REVVLRGTEISYFEPGLDPFTLNGDYIVDSLPSLVYSDFKRLSAAYDFISVGRTRIADRLCDVIRVVARDGTRYSFIAWL
DAETKLPLRVDLLDRDGETLEQFRVVSFNVGDNVSASMETLAKANLPPQLSVPEGGDKANFNWAPTWLPQGVTEVSSSQR
RLPTFDGPVESRLYSDGLFSFSININRATAASSDQLLRTGRRTVSTTVRDNAEITVVGELPPQTAKRISDSIKFKAVQ

Specific function: Seems to modulate the activity of rpoE (sigma-E) [H]

COG id: COG3026

COG function: function code T; Negative regulator of sigma E activity

Gene ontology:

Cell location: Periplasm (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the rseB family [H]

Homologues:

Organism=Escherichia coli, GI1788924, Length=319, Percent_Identity=80.564263322884, Blast_Score=537, Evalue=1e-154,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005588 [H]

Pfam domain/function: PF03888 MucB_RseB [H]

EC number: NA

Molecular weight: Translated: 35195; Mature: 35195

Theoretical pI: Translated: 6.08; Mature: 6.08

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
2.2 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
2.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKQLWCAMSLMAGSLLFSVNASADTSSGALLQQMNLASQSLNYELSFVSISKQGVESLRY
CCHHHHHHHHHHCCEEEEEECCCCCCCCHHHHHHHHHHHCCCEEEEEEEECHHHHHHHHH
RHARLNNQPLAQLLQLDGPRREVVLRGTEISYFEPGLDPFTLNGDYIVDSLPSLVYSDFK
HHHHCCCHHHHHHHHCCCCCCEEEEECCEEEEECCCCCEEEECCCHHHHHHHHHHHHHHH
RLSAAYDFISVGRTRIADRLCDVIRVVARDGTRYSFIAWLDAETKLPLRVDLLDRDGETL
HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEECCCCCCCEEEEEECCCCHHH
EQFRVVSFNVGDNVSASMETLAKANLPPQLSVPEGGDKANFNWAPTWLPQGVTEVSSSQR
HHEEEEEEECCCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHCCCC
RLPTFDGPVESRLYSDGLFSFSININRATAASSDQLLRTGRRTVSTTVRDNAEITVVGEL
CCCCCCCCHHHHHHCCCEEEEEEEECCCCCCCHHHHHHHCCHHEEEEECCCCEEEEEECC
PPQTAKRISDSIKFKAVQ
CCHHHHHHHHCCEEEECC
>Mature Secondary Structure
MKQLWCAMSLMAGSLLFSVNASADTSSGALLQQMNLASQSLNYELSFVSISKQGVESLRY
CCHHHHHHHHHHCCEEEEEECCCCCCCCHHHHHHHHHHHCCCEEEEEEEECHHHHHHHHH
RHARLNNQPLAQLLQLDGPRREVVLRGTEISYFEPGLDPFTLNGDYIVDSLPSLVYSDFK
HHHHCCCHHHHHHHHCCCCCCEEEEECCEEEEECCCCCEEEECCCHHHHHHHHHHHHHHH
RLSAAYDFISVGRTRIADRLCDVIRVVARDGTRYSFIAWLDAETKLPLRVDLLDRDGETL
HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEECCCCCCCEEEEEECCCCHHH
EQFRVVSFNVGDNVSASMETLAKANLPPQLSVPEGGDKANFNWAPTWLPQGVTEVSSSQR
HHEEEEEEECCCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHCCCC
RLPTFDGPVESRLYSDGLFSFSININRATAASSDQLLRTGRRTVSTTVRDNAEITVVGEL
CCCCCCCCHHHHHHCCCEEEEEEEECCCCCCCHHHHHHHCCHHEEEEECCCCEEEEEECC
PPQTAKRISDSIKFKAVQ
CCHHHHHHHHCCEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]