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The map label for this gene is yphB [H]

Identifier: 238895996

GI number: 238895996

Start: 3953504

End: 3954337

Strand: Reverse

Name: yphB [H]

Synonym: KP1_4123

Alternate gene names: 238895996

Gene position: 3954337-3953504 (Counterclockwise)

Preceding gene: 238895997

Following gene: 238895995

Centisome position: 75.34

GC content: 54.2

Gene sequence:

>834_bases
ATGGCGGAAGAGTGGATTCTGGAGAACGCGCATCTGCGGATGTGCGTCTCTTCTCTGGGCGGCAAAGTGCAAAGTTTATT
CTCGCGGCAATATCAAGCGCCGGTACTATATGAAAATCCCGCCGGCGGCATGTTTCCGATGCTGCCATTGGCCAATCGCG
TCGCCGGCAACCGTTTTATTTTTCATGGGCAGGAGATTGTCCTGCCTCGCCACCATGCCGACGAGTATTTCTTTCTTCAC
GGTGACGGCTGGTTACAGCGCTGGGATATTATTGAGTACGGCGCCGAGTATTGTGTATTACAGCTGCGTCGGCAGCATGC
CTGCGGTTTCGATTATCTGGCGCAGCTCCGCTACCAGTTGCTGCGTAACCAGCTGATAGCGGAGCTAACGCTTACCCACT
ATGGGGAGGTCCCTGCGCTTTACGGCTGCGGCTTTCATCCCTTTTTCCCTTTCGATGAACGCAGCAAGGTTCAGTTCCAG
GTCAGCGGTTACTGGCCGGAAGGGGAGAATCACTTACCTCTCAACTGGCAAGGAAACTTGCCCGACTATGCCAATTTCAG
CGTGGCTCAGTTCGGTGAAGATCGTTGGCTGAACGTGGGTTATTCCGGCTGGGGCGGGCGGGCGAGGGTAAGCAATGACG
TGATGAATATCACAATTCTATCGCAAACTCCGTGGTTGATGCTGTTCAGAATGCAAGGTGAATCATTCCTTTGCCTCGAG
CCGCAAAGCCATCCGGTAAACGCCCACAACATGGACGGGCAGCCGGGGCTGCGAGTTTTAGGCGCGGGAGAGAAGCTCAA
TTTTTCGCTGAAAATCATCATCGAGGGGGCATAA

Upstream 100 bases:

>100_bases
ACGTCCCGGAAACGAAAGGTATCACCCTCGAAGCGCTGGAAGAGCAGCTGGCGCAGCGTCATACGGGCGTTAATGCGGCG
AAGCAGGAGCAGATGCGCTA

Downstream 100 bases:

>100_bases
ATAACGAGCTATCAGCAGACAAGAGCATCTTGCGCCCGCCGGGGTTTATCGCCAGACTATCGCCACCATTCGGGAGGAAA
TCATGGTCTTGCACTCCACG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 277; Mature: 276

Protein sequence:

>277_residues
MAEEWILENAHLRMCVSSLGGKVQSLFSRQYQAPVLYENPAGGMFPMLPLANRVAGNRFIFHGQEIVLPRHHADEYFFLH
GDGWLQRWDIIEYGAEYCVLQLRRQHACGFDYLAQLRYQLLRNQLIAELTLTHYGEVPALYGCGFHPFFPFDERSKVQFQ
VSGYWPEGENHLPLNWQGNLPDYANFSVAQFGEDRWLNVGYSGWGGRARVSNDVMNITILSQTPWLMLFRMQGESFLCLE
PQSHPVNAHNMDGQPGLRVLGAGEKLNFSLKIIIEGA

Sequences:

>Translated_277_residues
MAEEWILENAHLRMCVSSLGGKVQSLFSRQYQAPVLYENPAGGMFPMLPLANRVAGNRFIFHGQEIVLPRHHADEYFFLH
GDGWLQRWDIIEYGAEYCVLQLRRQHACGFDYLAQLRYQLLRNQLIAELTLTHYGEVPALYGCGFHPFFPFDERSKVQFQ
VSGYWPEGENHLPLNWQGNLPDYANFSVAQFGEDRWLNVGYSGWGGRARVSNDVMNITILSQTPWLMLFRMQGESFLCLE
PQSHPVNAHNMDGQPGLRVLGAGEKLNFSLKIIIEGA
>Mature_276_residues
AEEWILENAHLRMCVSSLGGKVQSLFSRQYQAPVLYENPAGGMFPMLPLANRVAGNRFIFHGQEIVLPRHHADEYFFLHG
DGWLQRWDIIEYGAEYCVLQLRRQHACGFDYLAQLRYQLLRNQLIAELTLTHYGEVPALYGCGFHPFFPFDERSKVQFQV
SGYWPEGENHLPLNWQGNLPDYANFSVAQFGEDRWLNVGYSGWGGRARVSNDVMNITILSQTPWLMLFRMQGESFLCLEP
QSHPVNAHNMDGQPGLRVLGAGEKLNFSLKIIIEGA

Specific function: Unknown

COG id: COG2017

COG function: function code G; Galactose mutarotase and related enzymes

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI1788894, Length=289, Percent_Identity=29.0657439446367, Blast_Score=130, Evalue=1e-31,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR008183
- InterPro:   IPR011013
- InterPro:   IPR014718 [H]

Pfam domain/function: PF01263 Aldose_epim [H]

EC number: NA

Molecular weight: Translated: 31711; Mature: 31579

Theoretical pI: Translated: 6.28; Mature: 6.28

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.8 %Cys     (Translated Protein)
2.9 %Met     (Translated Protein)
4.7 %Cys+Met (Translated Protein)
1.8 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
4.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAEEWILENAHLRMCVSSLGGKVQSLFSRQYQAPVLYENPAGGMFPMLPLANRVAGNRFI
CCCHHEECCCHHHHHHHHHCHHHHHHHHHHCCCCEEEECCCCCCCCHHHHHHHHCCCEEE
FHGQEIVLPRHHADEYFFLHGDGWLQRWDIIEYGAEYCVLQLRRQHACGFDYLAQLRYQL
EECCEEEEECCCCCCEEEEECCCCCEEHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHH
LRNQLIAELTLTHYGEVPALYGCGFHPFFPFDERSKVQFQVSGYWPEGENHLPLNWQGNL
HHHHHHHHHHHHHCCCCCEEECCCCCCCCCCCCCCEEEEEEEEECCCCCCCCCEEECCCC
PDYANFSVAQFGEDRWLNVGYSGWGGRARVSNDVMNITILSQTPWLMLFRMQGESFLCLE
CCCCCCCHHHCCCCCEEECCCCCCCCCEEECCCEEEEEEECCCCEEEEEEECCCEEEEEC
PQSHPVNAHNMDGQPGLRVLGAGEKLNFSLKIIIEGA
CCCCCCCCCCCCCCCCEEEEECCCEEEEEEEEEEECC
>Mature Secondary Structure 
AEEWILENAHLRMCVSSLGGKVQSLFSRQYQAPVLYENPAGGMFPMLPLANRVAGNRFI
CCHHEECCCHHHHHHHHHCHHHHHHHHHHCCCCEEEECCCCCCCCHHHHHHHHCCCEEE
FHGQEIVLPRHHADEYFFLHGDGWLQRWDIIEYGAEYCVLQLRRQHACGFDYLAQLRYQL
EECCEEEEECCCCCCEEEEECCCCCEEHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHH
LRNQLIAELTLTHYGEVPALYGCGFHPFFPFDERSKVQFQVSGYWPEGENHLPLNWQGNL
HHHHHHHHHHHHHCCCCCEEECCCCCCCCCCCCCCEEEEEEEEECCCCCCCCCEEECCCC
PDYANFSVAQFGEDRWLNVGYSGWGGRARVSNDVMNITILSQTPWLMLFRMQGESFLCLE
CCCCCCCHHHCCCCCEEECCCCCCCCCEEECCCEEEEEEECCCCEEEEEEECCCEEEEEC
PQSHPVNAHNMDGQPGLRVLGAGEKLNFSLKIIIEGA
CCCCCCCCCCCCCCCCEEEEECCCEEEEEEEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9278503 [H]