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The map label for this gene is yfaD [C]

Identifier: 238895945

GI number: 238895945

Start: 3892940

End: 3893869

Strand: Direct

Name: yfaD [C]

Synonym: KP1_4070

Alternate gene names: 238895945

Gene position: 3892940-3893869 (Clockwise)

Preceding gene: 238895944

Following gene: 238895951

Centisome position: 74.17

GC content: 58.6

Gene sequence:

>930_bases
ATGAACATGAAAAAGCCGACCTCCACGCCCCATGACGCCGTGTTTAAGACCTACCTCTCCCATCCCGATACCGCCCGTGA
TTTCCTGCAACTGTATCTGCCCGAGACGCTGCTTAAAGTGTGCGATCTGCGTACGCTGCATCTCGAGTCCGGGCATTTTG
TCGAAGACGATCTGCGTCCCTTTTACGCCGACATTTTGTATTCCCTGAAAACCACGGCGGGCGACGGTTATATTTATGCG
CTTATCGAACACCAGAGCACGCCCGACCGGCATATGGCCTTTCGTCTGATGCGCTACGCCATCGCCGCCATGCAGCGCCA
TCTCGATGCCGGCCACGATCGCCTGCCGCTGGTGATCCCTGTTCTCTTCTACCACGGTCTGGTGAGCCCCTATCCGTTCT
CTCTGCGCTGGCTCGATGAATTCGTCGCTCCGGAGCTGGCCGGCCACCTTTATCACGGGGCGTTTCCGCTGGCGGACATA
ACCGTCATTCCGGATGACGAGATTGCCACCCACCAGCGCATGGCAACGCTGGAGTTACTGCAAAAACATATTCGACAACG
CGATCTGGCGCAGCTCCTCGACAAGCTGAGCGAATTATTATTGACTGGACTGGCGACGGAATCGCAGGTACAAGCCCTGA
TGCACTATCTGGTACAGGCAGGCAACACGCGCGAGCCGATTAAATTCATTCGCGAGCTGGCGTTACGAACGCCGCAGCAT
AAGGAGACGTTGATGACGATTGCGGAATATCTGGAACAACAGGGGCTGGAGCGGGGCCTGGCGCAGGGGCGACAGGAAGG
CCGTCAGGAAGGACGGAAAGAAGAGGCGCAGCGCATCGCTGTCGCTATGCTGCACAGCGGCCTTCCGCGCGACCTGGTCG
CCCGGTTGACCGGGCTGACGGAGCAGGAGCTGACTCCCCTGGCGGACTAA

Upstream 100 bases:

>100_bases
GGCGCTTTTTTTTACGTGGGCGATTCCAGATCTTTCACGCCAATATCTCCCGCCCGACGGACGGTGCTACTGTTCATCCA
TCGCTCAATCCACTGGACGG

Downstream 100 bases:

>100_bases
AGCTTAAGGATCTCTTTCACGAAGGGGATCGTCAGCTTGCGCTGAGCGGTAATCGAGGCATGATCCAGCTGATCGAGGGT
CATAAACAGCGAACGCATCT

Product: putative YhgA-like transposase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 309; Mature: 309

Protein sequence:

>309_residues
MNMKKPTSTPHDAVFKTYLSHPDTARDFLQLYLPETLLKVCDLRTLHLESGHFVEDDLRPFYADILYSLKTTAGDGYIYA
LIEHQSTPDRHMAFRLMRYAIAAMQRHLDAGHDRLPLVIPVLFYHGLVSPYPFSLRWLDEFVAPELAGHLYHGAFPLADI
TVIPDDEIATHQRMATLELLQKHIRQRDLAQLLDKLSELLLTGLATESQVQALMHYLVQAGNTREPIKFIRELALRTPQH
KETLMTIAEYLEQQGLERGLAQGRQEGRQEGRKEEAQRIAVAMLHSGLPRDLVARLTGLTEQELTPLAD

Sequences:

>Translated_309_residues
MNMKKPTSTPHDAVFKTYLSHPDTARDFLQLYLPETLLKVCDLRTLHLESGHFVEDDLRPFYADILYSLKTTAGDGYIYA
LIEHQSTPDRHMAFRLMRYAIAAMQRHLDAGHDRLPLVIPVLFYHGLVSPYPFSLRWLDEFVAPELAGHLYHGAFPLADI
TVIPDDEIATHQRMATLELLQKHIRQRDLAQLLDKLSELLLTGLATESQVQALMHYLVQAGNTREPIKFIRELALRTPQH
KETLMTIAEYLEQQGLERGLAQGRQEGRQEGRKEEAQRIAVAMLHSGLPRDLVARLTGLTEQELTPLAD
>Mature_309_residues
MNMKKPTSTPHDAVFKTYLSHPDTARDFLQLYLPETLLKVCDLRTLHLESGHFVEDDLRPFYADILYSLKTTAGDGYIYA
LIEHQSTPDRHMAFRLMRYAIAAMQRHLDAGHDRLPLVIPVLFYHGLVSPYPFSLRWLDEFVAPELAGHLYHGAFPLADI
TVIPDDEIATHQRMATLELLQKHIRQRDLAQLLDKLSELLLTGLATESQVQALMHYLVQAGNTREPIKFIRELALRTPQH
KETLMTIAEYLEQQGLERGLAQGRQEGRQEGRKEEAQRIAVAMLHSGLPRDLVARLTGLTEQELTPLAD

Specific function: Unknown

COG id: COG5464

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the yadD/yfaD/yhgA/yjiP family [H]

Homologues:

Organism=Escherichia coli, GI1788577, Length=301, Percent_Identity=54.485049833887, Blast_Score=341, Evalue=3e-95,
Organism=Escherichia coli, GI1788643, Length=298, Percent_Identity=56.0402684563758, Blast_Score=339, Evalue=1e-94,
Organism=Escherichia coli, GI1789816, Length=302, Percent_Identity=54.3046357615894, Blast_Score=335, Evalue=2e-93,
Organism=Escherichia coli, GI1786324, Length=307, Percent_Identity=49.5114006514658, Blast_Score=306, Evalue=1e-84,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR010106
- InterPro:   IPR006842 [H]

Pfam domain/function: PF04754 Transposase_31 [H]

EC number: NA

Molecular weight: Translated: 35259; Mature: 35259

Theoretical pI: Translated: 6.41; Mature: 6.41

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
2.9 %Met     (Translated Protein)
3.2 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
2.9 %Met     (Mature Protein)
3.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNMKKPTSTPHDAVFKTYLSHPDTARDFLQLYLPETLLKVCDLRTLHLESGHFVEDDLRP
CCCCCCCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCHHEEECCCCCCHHHHHH
FYADILYSLKTTAGDGYIYALIEHQSTPDRHMAFRLMRYAIAAMQRHLDAGHDRLPLVIP
HHHHHHHHHHHCCCCCEEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHH
VLFYHGLVSPYPFSLRWLDEFVAPELAGHLYHGAFPLADITVIPDDEIATHQRMATLELL
HHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCEEECCCCHHHHHHHHHHHHHH
QKHIRQRDLAQLLDKLSELLLTGLATESQVQALMHYLVQAGNTREPIKFIRELALRTPQH
HHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCCH
KETLMTIAEYLEQQGLERGLAQGRQEGRQEGRKEEAQRIAVAMLHSGLPRDLVARLTGLT
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHCCC
EQELTPLAD
HHHCCCCCC
>Mature Secondary Structure
MNMKKPTSTPHDAVFKTYLSHPDTARDFLQLYLPETLLKVCDLRTLHLESGHFVEDDLRP
CCCCCCCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCHHEEECCCCCCHHHHHH
FYADILYSLKTTAGDGYIYALIEHQSTPDRHMAFRLMRYAIAAMQRHLDAGHDRLPLVIP
HHHHHHHHHHHCCCCCEEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHH
VLFYHGLVSPYPFSLRWLDEFVAPELAGHLYHGAFPLADITVIPDDEIATHQRMATLELL
HHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCEEECCCCHHHHHHHHHHHHHH
QKHIRQRDLAQLLDKLSELLLTGLATESQVQALMHYLVQAGNTREPIKFIRELALRTPQH
HHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCCH
KETLMTIAEYLEQQGLERGLAQGRQEGRQEGRKEEAQRIAVAMLHSGLPRDLVARLTGLT
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHCCC
EQELTPLAD
HHHCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11677609 [H]