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The map label for this gene is ypfI [H]

Identifier: 238895934

GI number: 238895934

Start: 3882579

End: 3884582

Strand: Reverse

Name: ypfI [H]

Synonym: KP1_4059

Alternate gene names: 238895934

Gene position: 3884582-3882579 (Counterclockwise)

Preceding gene: 238895935

Following gene: 238895933

Centisome position: 74.01

GC content: 68.01

Gene sequence:

>2004_bases
ATGATGGACGCGCTGCTTAACCTCACCGCGCAAATGGCGCGGGAGGGGATCCGTCGCCTGCTGGTGCTCAGCGGCGATGA
GAGCTGGACGCTGCAGCAGGCGCAGGCGCTACGGGAGAGGCTCGGCGGCGATGGCCTGTGGGTTGGCCCCGAGCCGGGTT
CTGCGCCCTGCGTGGCGCCTGGCGCGCTGAAAACGCTGCTGGGGCGGGAAGTGATGCACGCCTTTTTCGATGCCCGGCGC
GGGTTTGATGTGGCCGCCATGGCGGCCCTGAGCGGCACGCTGCGGGCGGGAAGCTGGCTGGTGCTGCTGACGCCCCCCTT
CGCCGACTGGCCGACCCGGGCGGATGAGGACTCTCTGCGCTGGAGCGATACGCCTGACCCTATCGTTACCCCTAACTTTG
TTCACCGCTGCTGTCGGCAGTTTATCGCCGATCCGGAGGTGTTGCTCTGGCGGCAGTCGGACCGGCCACGTTTCCCGCTG
GCCGCCCCGCGTCCCGACTGGCATCCCGCCGATGGCCGCCCGCAGGCCGAGCAGGCGGCAATCCTTGAGCAACTGATACG
CCTGCCGCCCGGTATCGCGGCGGTGACGGCGGAGCGTGGACGGGGGAAGTCCGCGCTGGCGGGTATGCTCCTGCGCCAGC
TTGGGGGCGAGGCCATCGTCACCGCCCCAACGCGTAGCGCTGTCGAGGTGCTGGCCAGCTTTGCCGGGGAGACGTTGCGC
TTTATGGCGCCCGATGCGCTGCTGGCGTCGAAAGAAAAGGCGGCGTGGCTGATAGTCGATGAGGCCGCGGCTATCCCGGC
TCCGCTTCTCCGGCAACTGGTGAGCCGTTTTCCCCGCACGCTACTCACCACGACGGTGCAAGGGTACGAGGGCACCGGTC
GCGGGTTCCTGCTGAAATTTTGCGCCAGTCTGCCCCATCTGCAATCGTTCACCCTGAGCGCCCCGATCCGCTGGGCGGCG
GGCTGTCCGCTGGAGTCAGCCATCAGTCAGTTGCTTATCTTTAACGATGAGGCATTTCGCGACGCGCCGATGGGGGAGCT
AGCCCTGGAGGCGGTCAATCAGTCCTGCTGGCAAACGCAGCCAGCGCTACCGGAGGCGATGTACCAGCTATTGTCCGGGG
CGCATTACCGAACTTCCCCGCTCGATCTGCGGCGCATGATGGATGCTCCGGGCCAGGCTTTCCGCTGCGCTCGCGCCGGC
GGCGCGGTAGCGGGCGCCCTGTGGCTGGTGGCCGAGGGGGGACTTTCTCGCGAACTGAGCCGGGCGGTATGGGCGGGTTT
TCGCCGGCCGCGCGGGAATCTGGTCGCCCAGTCGCTGGCGGCGCACGGCGGCAGTCCCCTGGCGGCGACGCTGCGCGGGC
TGCGGGTCAGTCGGATCGCTGTCCATCCCACCCGCCAGCGGGAAGGCCTTGGGCGGAAGATGATCGCCGATATCGCCGCC
GATGCCGCTGGCTATGACTATCTCTCCGTCAGCTTCGGCTATACCGCTGAGCTGTGGCGCTTCTGGCAACGCTGCGGGTT
TACCCTCGTACGGCTGGGTACCCATCGCGAGGCCAGCAGCGGCTGCTATACGGCGATGGCCCTCTATCCGTTGACCGCGG
CAGGGCGCCAGCTGGCGCAGCGGGAGGCGCAGCGGCTGCAGCGCGATGAATACTGGCTTCGCCCGTGGCGAGAGGAATCC
GCGCCGCTGCCGGCCGTCGCAGACGCTATGCTTAGTGATGAGGACTGGCTGGAAGCGGCGAGCTTTGCCTTCGCCCACCG
CCCGCTGGCCGCGGCGCTGGGTTGCCTCAACCGCCTACTGATGCAGGCCGACATGCCGTTGCCGGCCCTGCGGGGACGAC
TGCAGGGCAAAGAGGAGGCCGCACTCTGCGCCGTGCTGCAGCTGACGGGGCGAAAAGCCTTGCAGGCGAGATGGCGTCGG
GAGGCCGCTGACGCCTTGCGCTCCCTTGATGCAGCGCGCGCTGATGCGCTGCGTCAGCAGGTGGCGCATCTGCAATTTTT
TTAA

Upstream 100 bases:

>100_bases
CGGCACCTCGAAACAGCGCTACACCTGGTTCAAACGCGGTTTCGATAGCGGCGATCCGGCGCAGTGCAATACCTTCGGCA
GCGCGCTGTAATCGTCCCCC

Downstream 100 bases:

>100_bases
CTAACTCATTCAGTTAAATGGCATGGTCATATCTGGCGAGCGGCGTACACTGCCCGCAAACACTAAGGAGACAGCCATGA
AACACGATCATTTTATTGTT

Product: putative acyl-CoA N-acyltransferase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 667; Mature: 667

Protein sequence:

>667_residues
MMDALLNLTAQMAREGIRRLLVLSGDESWTLQQAQALRERLGGDGLWVGPEPGSAPCVAPGALKTLLGREVMHAFFDARR
GFDVAAMAALSGTLRAGSWLVLLTPPFADWPTRADEDSLRWSDTPDPIVTPNFVHRCCRQFIADPEVLLWRQSDRPRFPL
AAPRPDWHPADGRPQAEQAAILEQLIRLPPGIAAVTAERGRGKSALAGMLLRQLGGEAIVTAPTRSAVEVLASFAGETLR
FMAPDALLASKEKAAWLIVDEAAAIPAPLLRQLVSRFPRTLLTTTVQGYEGTGRGFLLKFCASLPHLQSFTLSAPIRWAA
GCPLESAISQLLIFNDEAFRDAPMGELALEAVNQSCWQTQPALPEAMYQLLSGAHYRTSPLDLRRMMDAPGQAFRCARAG
GAVAGALWLVAEGGLSRELSRAVWAGFRRPRGNLVAQSLAAHGGSPLAATLRGLRVSRIAVHPTRQREGLGRKMIADIAA
DAAGYDYLSVSFGYTAELWRFWQRCGFTLVRLGTHREASSGCYTAMALYPLTAAGRQLAQREAQRLQRDEYWLRPWREES
APLPAVADAMLSDEDWLEAASFAFAHRPLAAALGCLNRLLMQADMPLPALRGRLQGKEEAALCAVLQLTGRKALQARWRR
EAADALRSLDAARADALRQQVAHLQFF

Sequences:

>Translated_667_residues
MMDALLNLTAQMAREGIRRLLVLSGDESWTLQQAQALRERLGGDGLWVGPEPGSAPCVAPGALKTLLGREVMHAFFDARR
GFDVAAMAALSGTLRAGSWLVLLTPPFADWPTRADEDSLRWSDTPDPIVTPNFVHRCCRQFIADPEVLLWRQSDRPRFPL
AAPRPDWHPADGRPQAEQAAILEQLIRLPPGIAAVTAERGRGKSALAGMLLRQLGGEAIVTAPTRSAVEVLASFAGETLR
FMAPDALLASKEKAAWLIVDEAAAIPAPLLRQLVSRFPRTLLTTTVQGYEGTGRGFLLKFCASLPHLQSFTLSAPIRWAA
GCPLESAISQLLIFNDEAFRDAPMGELALEAVNQSCWQTQPALPEAMYQLLSGAHYRTSPLDLRRMMDAPGQAFRCARAG
GAVAGALWLVAEGGLSRELSRAVWAGFRRPRGNLVAQSLAAHGGSPLAATLRGLRVSRIAVHPTRQREGLGRKMIADIAA
DAAGYDYLSVSFGYTAELWRFWQRCGFTLVRLGTHREASSGCYTAMALYPLTAAGRQLAQREAQRLQRDEYWLRPWREES
APLPAVADAMLSDEDWLEAASFAFAHRPLAAALGCLNRLLMQADMPLPALRGRLQGKEEAALCAVLQLTGRKALQARWRR
EAADALRSLDAARADALRQQVAHLQFF
>Mature_667_residues
MMDALLNLTAQMAREGIRRLLVLSGDESWTLQQAQALRERLGGDGLWVGPEPGSAPCVAPGALKTLLGREVMHAFFDARR
GFDVAAMAALSGTLRAGSWLVLLTPPFADWPTRADEDSLRWSDTPDPIVTPNFVHRCCRQFIADPEVLLWRQSDRPRFPL
AAPRPDWHPADGRPQAEQAAILEQLIRLPPGIAAVTAERGRGKSALAGMLLRQLGGEAIVTAPTRSAVEVLASFAGETLR
FMAPDALLASKEKAAWLIVDEAAAIPAPLLRQLVSRFPRTLLTTTVQGYEGTGRGFLLKFCASLPHLQSFTLSAPIRWAA
GCPLESAISQLLIFNDEAFRDAPMGELALEAVNQSCWQTQPALPEAMYQLLSGAHYRTSPLDLRRMMDAPGQAFRCARAG
GAVAGALWLVAEGGLSRELSRAVWAGFRRPRGNLVAQSLAAHGGSPLAATLRGLRVSRIAVHPTRQREGLGRKMIADIAA
DAAGYDYLSVSFGYTAELWRFWQRCGFTLVRLGTHREASSGCYTAMALYPLTAAGRQLAQREAQRLQRDEYWLRPWREES
APLPAVADAMLSDEDWLEAASFAFAHRPLAAALGCLNRLLMQADMPLPALRGRLQGKEEAALCAVLQLTGRKALQARWRR
EAADALRSLDAARADALRQQVAHLQFF

Specific function: Catalyzes the formation of N(4)-acetylcytidine (ac(4)C) at the wobble position of tRNA(Met), by using acetyl-CoA as an acetyl donor and ATP (or GTP). It recognizes the wobble base of tRNA(Met), thus distinguishing between tRNA(Met) and the structurally si

COG id: COG1444

COG function: function code R; Predicted P-loop ATPase fused to an acetyltransferase

Gene ontology:

Cell location: Cytoplasm (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 N-acetyltransferase domain [H]

Homologues:

Organism=Homo sapiens, GI221316741, Length=406, Percent_Identity=23.3990147783251, Blast_Score=88, Evalue=2e-17,
Organism=Homo sapiens, GI221316723, Length=407, Percent_Identity=23.0958230958231, Blast_Score=88, Evalue=2e-17,
Organism=Escherichia coli, GI1788818, Length=667, Percent_Identity=63.568215892054, Blast_Score=842, Evalue=0.0,
Organism=Caenorhabditis elegans, GI17507621, Length=364, Percent_Identity=25, Blast_Score=77, Evalue=3e-14,
Organism=Drosophila melanogaster, GI24640662, Length=369, Percent_Identity=24.1192411924119, Blast_Score=94, Evalue=3e-19,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000182
- InterPro:   IPR016181
- InterPro:   IPR013562
- InterPro:   IPR007807 [H]

Pfam domain/function: PF08351 DUF1726; PF05127 DUF699 [H]

EC number: NA

Molecular weight: Translated: 72892; Mature: 72892

Theoretical pI: Translated: 8.88; Mature: 8.88

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.6 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
4.0 %Cys+Met (Translated Protein)
1.6 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
4.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MMDALLNLTAQMAREGIRRLLVLSGDESWTLQQAQALRERLGGDGLWVGPEPGSAPCVAP
CCHHHHHHHHHHHHHHHHHEEEECCCCCHHHHHHHHHHHHHCCCCEEECCCCCCCCCCCH
GALKTLLGREVMHAFFDARRGFDVAAMAALSGTLRAGSWLVLLTPPFADWPTRADEDSLR
HHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCEEEEECCCCCCCCCCCCCCCCC
WSDTPDPIVTPNFVHRCCRQFIADPEVLLWRQSDRPRFPLAAPRPDWHPADGRPQAEQAA
CCCCCCCCCCCHHHHHHHHHHHCCCCEEEEECCCCCCCCCCCCCCCCCCCCCCCCHHHHH
ILEQLIRLPPGIAAVTAERGRGKSALAGMLLRQLGGEAIVTAPTRSAVEVLASFAGETLR
HHHHHHHCCCCCEEEECCCCCCHHHHHHHHHHHCCCCEEEECCCHHHHHHHHHHHCCHHH
FMAPDALLASKEKAAWLIVDEAAAIPAPLLRQLVSRFPRTLLTTTVQGYEGTGRGFLLKF
HHCCHHHHHCCCCCEEEEEECHHCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHH
CASLPHLQSFTLSAPIRWAAGCPLESAISQLLIFNDEAFRDAPMGELALEAVNQSCWQTQ
HHCCCCHHHHCCCCCCHHCCCCCHHHHHHHHHHCCCHHHCCCCHHHHHHHHHHHHHHCCC
PALPEAMYQLLSGAHYRTSPLDLRRMMDAPGQAFRCARAGGAVAGALWLVAEGGLSRELS
CCCHHHHHHHHCCCCCCCCHHHHHHHHCCCCHHHHHHHCCCHHHHHHHHHCCCCCHHHHH
RAVWAGFRRPRGNLVAQSLAAHGGSPLAATLRGLRVSRIAVHPTRQREGLGRKMIADIAA
HHHHHHCCCCCCHHHHHHHHHCCCCHHHHHHHCCHHHHEEECCCHHHHCCHHHHHHHHHH
DAAGYDYLSVSFGYTAELWRFWQRCGFTLVRLGTHREASSGCYTAMALYPLTAAGRQLAQ
HHCCCCEEEEECCCHHHHHHHHHHHCCEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHH
REAQRLQRDEYWLRPWREESAPLPAVADAMLSDEDWLEAASFAFAHRPLAAALGCLNRLL
HHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
MQADMPLPALRGRLQGKEEAALCAVLQLTGRKALQARWRREAADALRSLDAARADALRQQ
HHCCCCCHHHHHHCCCCHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
VAHLQFF
HHHHCCC
>Mature Secondary Structure
MMDALLNLTAQMAREGIRRLLVLSGDESWTLQQAQALRERLGGDGLWVGPEPGSAPCVAP
CCHHHHHHHHHHHHHHHHHEEEECCCCCHHHHHHHHHHHHHCCCCEEECCCCCCCCCCCH
GALKTLLGREVMHAFFDARRGFDVAAMAALSGTLRAGSWLVLLTPPFADWPTRADEDSLR
HHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCEEEEECCCCCCCCCCCCCCCCC
WSDTPDPIVTPNFVHRCCRQFIADPEVLLWRQSDRPRFPLAAPRPDWHPADGRPQAEQAA
CCCCCCCCCCCHHHHHHHHHHHCCCCEEEEECCCCCCCCCCCCCCCCCCCCCCCCHHHHH
ILEQLIRLPPGIAAVTAERGRGKSALAGMLLRQLGGEAIVTAPTRSAVEVLASFAGETLR
HHHHHHHCCCCCEEEECCCCCCHHHHHHHHHHHCCCCEEEECCCHHHHHHHHHHHCCHHH
FMAPDALLASKEKAAWLIVDEAAAIPAPLLRQLVSRFPRTLLTTTVQGYEGTGRGFLLKF
HHCCHHHHHCCCCCEEEEEECHHCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHH
CASLPHLQSFTLSAPIRWAAGCPLESAISQLLIFNDEAFRDAPMGELALEAVNQSCWQTQ
HHCCCCHHHHCCCCCCHHCCCCCHHHHHHHHHHCCCHHHCCCCHHHHHHHHHHHHHHCCC
PALPEAMYQLLSGAHYRTSPLDLRRMMDAPGQAFRCARAGGAVAGALWLVAEGGLSRELS
CCCHHHHHHHHCCCCCCCCHHHHHHHHCCCCHHHHHHHCCCHHHHHHHHHCCCCCHHHHH
RAVWAGFRRPRGNLVAQSLAAHGGSPLAATLRGLRVSRIAVHPTRQREGLGRKMIADIAA
HHHHHHCCCCCCHHHHHHHHHCCCCHHHHHHHCCHHHHEEECCCHHHHCCHHHHHHHHHH
DAAGYDYLSVSFGYTAELWRFWQRCGFTLVRLGTHREASSGCYTAMALYPLTAAGRQLAQ
HHCCCCEEEEECCCHHHHHHHHHHHCCEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHH
REAQRLQRDEYWLRPWREESAPLPAVADAMLSDEDWLEAASFAFAHRPLAAALGCLNRLL
HHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
MQADMPLPALRGRLQGKEEAALCAVLQLTGRKALQARWRREAADALRSLDAARADALRQQ
HHCCCCCHHHHHHCCCCHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
VAHLQFF
HHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9205837; 9278503 [H]