Click here to switch to the map view.

The map label for this gene is yffB [H]

Identifier: 238895930

GI number: 238895930

Start: 3880044

End: 3880397

Strand: Direct

Name: yffB [H]

Synonym: KP1_4055

Alternate gene names: 238895930

Gene position: 3880044-3880397 (Clockwise)

Preceding gene: 238895929

Following gene: 238895931

Centisome position: 73.93

GC content: 54.8

Gene sequence:

>354_bases
ATGCTCACCATGTACGGAATTAAAAACTGCGATACCATTAAAAAAGCCCGCCGCTGGCTGGAAGCGCATCAGATTGAGTA
TCGCTTCCATGATTACCGCGCCGATGGCCTTGAGCGCGCGCAACTGGATACCTTTATTGCCGAGCTGGGCTGGCAGGCGC
TGCTGAACACCCGTGGCACCACCTGGCGCAAACTCGACGAGTCGCTGCGCAATAGCATCGATAATGCCGACGCCGCTGCC
GCATTGATGCTGGAAATGCCGGCAATTATCAAACGCCCATTGCTCTGCGCGCCCGGTCGTCCTATGCTGCTGGGTTTTAG
TGAAGCAAGTTATCAGCAGTTTAACGAGGTATAG

Upstream 100 bases:

>100_bases
AAGTTATATTTATTCATCTGAATCACGTATTATTTCAGTAAGACTTATATATTCGGAAATATCTGAGTTAACCGCTTAAT
TGAATGTAAAAGGTTTATCT

Downstream 100 bases:

>100_bases
TCTATGTCTTGCCCGGTCATTGAGCTGGCTCAGCAGCTTATTCGCCGCCCTTCCCTTAGCCCCGATGATGCGGGATGCCA
GGCGTTAATGATTGAACGCC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 117; Mature: 117

Protein sequence:

>117_residues
MLTMYGIKNCDTIKKARRWLEAHQIEYRFHDYRADGLERAQLDTFIAELGWQALLNTRGTTWRKLDESLRNSIDNADAAA
ALMLEMPAIIKRPLLCAPGRPMLLGFSEASYQQFNEV

Sequences:

>Translated_117_residues
MLTMYGIKNCDTIKKARRWLEAHQIEYRFHDYRADGLERAQLDTFIAELGWQALLNTRGTTWRKLDESLRNSIDNADAAA
ALMLEMPAIIKRPLLCAPGRPMLLGFSEASYQQFNEV
>Mature_117_residues
MLTMYGIKNCDTIKKARRWLEAHQIEYRFHDYRADGLERAQLDTFIAELGWQALLNTRGTTWRKLDESLRNSIDNADAAA
ALMLEMPAIIKRPLLCAPGRPMLLGFSEASYQQFNEV

Specific function: Unknown

COG id: COG1393

COG function: function code P; Arsenate reductase and related proteins, glutaredoxin family

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the ArsC family [H]

Homologues:

Organism=Escherichia coli, GI1788815, Length=114, Percent_Identity=77.1929824561403, Blast_Score=194, Evalue=1e-51,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006660
- InterPro:   IPR012336
- InterPro:   IPR012335
- InterPro:   IPR006504 [H]

Pfam domain/function: PF03960 ArsC [H]

EC number: NA

Molecular weight: Translated: 13477; Mature: 13477

Theoretical pI: Translated: 7.41; Mature: 7.41

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.7 %Cys     (Translated Protein)
4.3 %Met     (Translated Protein)
6.0 %Cys+Met (Translated Protein)
1.7 %Cys     (Mature Protein)
4.3 %Met     (Mature Protein)
6.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLTMYGIKNCDTIKKARRWLEAHQIEYRFHDYRADGLERAQLDTFIAELGWQALLNTRGT
CCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHCCCC
TWRKLDESLRNSIDNADAAAALMLEMPAIIKRPLLCAPGRPMLLGFSEASYQQFNEV
HHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCEEEECCHHHHHHHCCC
>Mature Secondary Structure
MLTMYGIKNCDTIKKARRWLEAHQIEYRFHDYRADGLERAQLDTFIAELGWQALLNTRGT
CCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHCCCC
TWRKLDESLRNSIDNADAAAALMLEMPAIIKRPLLCAPGRPMLLGFSEASYQQFNEV
HHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCEEEECCHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 1644752; 9205837; 9278503; 10493123 [H]