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The map label for this gene is cchB [H]

Identifier: 238895916

GI number: 238895916

Start: 3862460

End: 3862804

Strand: Reverse

Name: cchB [H]

Synonym: KP1_4040

Alternate gene names: 238895916

Gene position: 3862804-3862460 (Counterclockwise)

Preceding gene: 238895917

Following gene: 238895915

Centisome position: 73.6

GC content: 62.61

Gene sequence:

>345_bases
ATGAATGCCGGATGGCGTTGCGCTTTTCCGGCCTGCACATCACACGCGGAGACGGACATGAAGCTGGCTGTGGTAACCGG
ATATGTGGTCTGCACCGTACGCCATGAAGGTCTGGCCCACGACAAACTGCTGATGGTGGAGATGCTCAATGCCCGCGGCG
AGCCCGACGGGCAATGTGCGGTCGCCATCGACAGCATCGGCGCGGGATGCGGAGAGTGGGTACTGCTGGTCAGCGGCAGC
TCGGCGCGACAGGCGCACGCACACGGCGCCTCTCCGGTCGATCTGTGCGTGATTGGTATCGTGGATGAGGCTGCGGCCGA
TGGTCAGGTGCTCTTCCATAAGTAG

Upstream 100 bases:

>100_bases
TTAGCTTCAAGGGCGACAGCAACATCTAACGGGGGAGGGGGTGCCGGAAAGTTCTGGCCGGATAAGACGCCAGCGCGTCG
CTATCCGGCCATGAAAAGGC

Downstream 100 bases:

>100_bases
GGTGAAAAATCATGAATCAACAGGACATTGAACAGGTAGTGAAAGCGGTACTGCTGAAAATGAAAGACAGCAGCCAGCCT
GCCGGCACCGTTCATGATAT

Product: detox protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 114; Mature: 114

Protein sequence:

>114_residues
MNAGWRCAFPACTSHAETDMKLAVVTGYVVCTVRHEGLAHDKLLMVEMLNARGEPDGQCAVAIDSIGAGCGEWVLLVSGS
SARQAHAHGASPVDLCVIGIVDEAAADGQVLFHK

Sequences:

>Translated_114_residues
MNAGWRCAFPACTSHAETDMKLAVVTGYVVCTVRHEGLAHDKLLMVEMLNARGEPDGQCAVAIDSIGAGCGEWVLLVSGS
SARQAHAHGASPVDLCVIGIVDEAAADGQVLFHK
>Mature_114_residues
MNAGWRCAFPACTSHAETDMKLAVVTGYVVCTVRHEGLAHDKLLMVEMLNARGEPDGQCAVAIDSIGAGCGEWVLLVSGS
SARQAHAHGASPVDLCVIGIVDEAAADGQVLFHK

Specific function: May be involved in the formation of a specific microcompartment in the cell in which the metabolism of potentially toxic by-products takes place [H]

COG id: COG4576

COG function: function code QC; Carbon dioxide concentrating mechanism/carboxysome shell protein

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: To cyanobacterial carbon dioxide concentrating mechanism protein CcmL [H]

Homologues:

Organism=Escherichia coli, GI1788798, Length=95, Percent_Identity=80, Blast_Score=156, Evalue=3e-40,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004992
- ProDom:   PD012510 [H]

Pfam domain/function: PF03319 EutN_CcmL [H]

EC number: NA

Molecular weight: Translated: 11888; Mature: 11888

Theoretical pI: Translated: 5.43; Mature: 5.43

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

5.3 %Cys     (Translated Protein)
3.5 %Met     (Translated Protein)
8.8 %Cys+Met (Translated Protein)
5.3 %Cys     (Mature Protein)
3.5 %Met     (Mature Protein)
8.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNAGWRCAFPACTSHAETDMKLAVVTGYVVCTVRHEGLAHDKLLMVEMLNARGEPDGQCA
CCCCEEEECCCCCCCCCCCEEEEEEEEEEEEEEECCCCCCCHHHHEEHHHCCCCCCCCEE
VAIDSIGAGCGEWVLLVSGSSARQAHAHGASPVDLCVIGIVDEAAADGQVLFHK
EEEECCCCCCCCEEEEEECCCCCCCCCCCCCCHHEEEEEEECCCCCCCEEEEEC
>Mature Secondary Structure
MNAGWRCAFPACTSHAETDMKLAVVTGYVVCTVRHEGLAHDKLLMVEMLNARGEPDGQCA
CCCCEEEECCCCCCCCCCCEEEEEEEEEEEEEEECCCCCCCHHHHEEHHHCCCCCCCCEE
VAIDSIGAGCGEWVLLVSGSSARQAHAHGASPVDLCVIGIVDEAAADGQVLFHK
EEEECCCCCCCCEEEEEECCCCCCCCCCCCCCHHEEEEEEECCCCCCCEEEEEC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 7868611; 10464203; 11677609 [H]