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The map label for this gene is yfeD [H]

Identifier: 238895878

GI number: 238895878

Start: 3825334

End: 3825726

Strand: Direct

Name: yfeD [H]

Synonym: KP1_4000

Alternate gene names: 238895878

Gene position: 3825334-3825726 (Clockwise)

Preceding gene: 238895877

Following gene: 238895881

Centisome position: 72.88

GC content: 57.51

Gene sequence:

>393_bases
ATGATGAAACTGAAAGATAAAATGACGCCCGCAGAGCTTGCCGACTGCCTGGGGCTGGCCAGACAAACGATCAATCGCTG
GGTTCGCGAGAAACAATGGCGCACCGAAGCAATACCCGGCGTTAAAGGGGGGCGAGCGCGACTGGTGGTTATCGACCAAC
CGGTACGCGAGTTTCTGACCAACATCCCTGCCAGACGCCATCTGCTTACCGACAATCATCTCGCGGAATCGCCAGGTGCA
TACCTGGTCAATGAGGCAGACGCGATCTGGCGGCAAATCACGGAAACCCTACAGCTGATGACTCCGGCAGAACAGCTGCA
GCTCCGCGATCTGCTGGCCCGGGAAGGGATTAGTGGTTTTCTTGCCCGCCTCGGCATCGCCAGTCCGGAATAA

Upstream 100 bases:

>100_bases
AGAACTCACCCCCAGCGAGCAGAAGCAGCTTATGTCATTGTTGCTGCGCGAGGGGATCACCGGGTTACTGCTTCGGTTAG
GGATCCGCGATCGGTAAACC

Downstream 100 bases:

>100_bases
CAGACAAAAAAAACGGCAGGGTAACCTGCCGTTGTTTCAGCTGCGACGCCGTCAGGACGCCTGGCCTTCGCGTTCAGCGA
TAAAAGCCAGCGCTTTATTG

Product: putative negative regulator

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 130; Mature: 130

Protein sequence:

>130_residues
MMKLKDKMTPAELADCLGLARQTINRWVREKQWRTEAIPGVKGGRARLVVIDQPVREFLTNIPARRHLLTDNHLAESPGA
YLVNEADAIWRQITETLQLMTPAEQLQLRDLLAREGISGFLARLGIASPE

Sequences:

>Translated_130_residues
MMKLKDKMTPAELADCLGLARQTINRWVREKQWRTEAIPGVKGGRARLVVIDQPVREFLTNIPARRHLLTDNHLAESPGA
YLVNEADAIWRQITETLQLMTPAEQLQLRDLLAREGISGFLARLGIASPE
>Mature_130_residues
MMKLKDKMTPAELADCLGLARQTINRWVREKQWRTEAIPGVKGGRARLVVIDQPVREFLTNIPARRHLLTDNHLAESPGA
YLVNEADAIWRQITETLQLMTPAEQLQLRDLLAREGISGFLARLGIASPE

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI226510963, Length=131, Percent_Identity=48.0916030534351, Blast_Score=119, Evalue=5e-29,
Organism=Escherichia coli, GI87082097, Length=120, Percent_Identity=46.6666666666667, Blast_Score=89, Evalue=1e-19,

Paralogues:

None

Copy number: 10-20 Molecules/Cell [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR009061
- InterPro:   IPR010749
- InterPro:   IPR011991
- ProDom:   PD060594 [H]

Pfam domain/function: PF07037 DUF1323 [H]

EC number: NA

Molecular weight: Translated: 14681; Mature: 14681

Theoretical pI: Translated: 9.30; Mature: 9.30

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
3.1 %Met     (Translated Protein)
3.8 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
3.1 %Met     (Mature Protein)
3.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MMKLKDKMTPAELADCLGLARQTINRWVREKQWRTEAIPGVKGGRARLVVIDQPVREFLT
CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEECHHHHHHHH
NIPARRHLLTDNHLAESPGAYLVNEADAIWRQITETLQLMTPAEQLQLRDLLAREGISGF
CCCHHHHHCCCCCCCCCCCCEEECHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCHHHH
LARLGIASPE
HHHHCCCCCC
>Mature Secondary Structure
MMKLKDKMTPAELADCLGLARQTINRWVREKQWRTEAIPGVKGGRARLVVIDQPVREFLT
CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEECHHHHHHHH
NIPARRHLLTDNHLAESPGAYLVNEADAIWRQITETLQLMTPAEQLQLRDLLAREGISGF
CCCHHHHHCCCCCCCCCCCCEEECHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCHHHH
LARLGIASPE
HHHHCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 2201776; 9205837; 9278503 [H]