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The map label for this gene is yfeA [H]

Identifier: 238895876

GI number: 238895876

Start: 3822184

End: 3824355

Strand: Reverse

Name: yfeA [H]

Synonym: KP1_3998

Alternate gene names: 238895876

Gene position: 3824355-3822184 (Counterclockwise)

Preceding gene: 238895879

Following gene: 238895874

Centisome position: 72.87

GC content: 50.92

Gene sequence:

>2172_bases
ATGCTTGATAAAATTAACATTAATATCAAAAAAACTCTATTGGCCTTTATCATTTGTTTAGTCGCTATTCCGCTGGCCCG
TTTTATTTCACCGCAAACGATAATTGACGGCAACCTTATTTATATTGCCTGGCTGCCAATCAGCGTGATGTTTTCTGTTA
TTTTTATCTTTGGCCGCTATGCGATTGCGCCATTAATTCTCGCGTTTGCCATCACCAATAGTTTTCTCATTAAATTAACG
CTGCCGCAGGCGTTTATCTTACTTTTTTGTCAACTGTTCGCCGTGTTTGTCTCCTGCGCTATTCTGCGACTGATGGTGGG
GAAGCGCTGGCGCTGCGGTCCAACGGCAAAACATATGGGGGCGCGGATCTTCTGGGGCGGCTTCTTCGCGCCGGTGCTCC
TGAAAATCACCATGTATCTCGCCGGACAATATTTTGCGTTTCCATTAGCTATTACCAGTTACTTTGGTAGTATGCCGTTG
ATTTATACTGTAATAGATATCCAAAGTTTAATCAGTGCGGCATTAATTTTTACGACGTTTCTTTATTATCCAATGCGGAT
GATTATCAGTCCGCGCTACGCCCGACGTTTCTGGCAGCAGGAATGTTTACCGTGGCTGGCACCACAATATCGCTCCTTTA
CCCTATATTGGTTTATCGCGTTGGCGGTGATATTAACGCTATTGTGTGCGCCGTATCAGTCTGAATTTATTGCCGGTTAT
TTAGTTCCGGTTATTTTTATTGTTTACTTTATCGGTATCAGTCGAATAGGCCATGCGCTATTGCGTATTTCATGGTCTGT
CTCGGCCTTTTTGCTGGTGGTATATAACAAAAACTTTCTCCAGGGGGTGCAAAGCGAGTATTCACTCTCCTTTGTGCTGT
CGGTTCTGATCTCCTTTACTATCTGTTTGTTTTATATGGCCGACATCTATGCCCGCAGCGACCGCAACAAACGCCGCTGG
CGTAGCCAGGCGGAAGAGGATCCGCTGACCGGCTTGCCTAACCTGCGCGCGCTGGAGAGCCATTTACAGAGCTGTCCTCA
GCAGGCTATCTGCAGCCTGCGTATTGATAATCTCGACTTTCTCAGTCGGCATTATGGTCTGATGATGGGGGTGGACTGTA
AACGGCAGATTATTCGGGCGCTGCAACCGCTGCTGGGAGCGGCGGATAAAGTCTTCCAGGTACCGGGCAGCGAACTGATC
CTCGTGCTTGATGGACCGGAGCCGTCGTCCCGCTTGAACCATATGGTCGCGGTCCTCAACCACAAAAAGTTCAGCTGGCA
CAATCAGCCGCTGGATTTGGAGTTTGGCGCGGCCTGGGGCCGCGATGACGGCCAGGGTGAGGGACTTTACCAGATGCTGG
GCCAGCTAAGCTGGCTTTCCGAACAGGCGGGCAGTGAACGTCGGGTGCTGGCGCTGGACGAGGAGCAGGATCTGGTGGTG
GATCAAACTACCGAGCAGGTGCGCCTCCTAATGCGCGTCAAGCAAGTGCTCAAAGATCGCGCGCTGATGCTCTATGCGCA
ACCGATTCAGAATCCGGAGGGGGAGGGTTATCATGAGATCCTCACGCGCATGCGCTGTGGCGATAGCGTCATTATGCCCG
ACCGATTCATTCCGCTGATTGTGCAGTTTAACCTCAGCCAACGTTTTGACATGCTGGTGCTGGAGACCTTGTTCAGTATG
CTCCATAAGCATCCCGGCCAGCGCTTCTCGGTCAACCTGCTGCCTGCAACTCTGATGCAAAAGAACAGCGCAGGGCAGAT
TATCGCGCTGTTTCAACGCTATAGCGTCTCGCCAGAACTTATAACTATTGAGGTGACCGAAGAGCAGGCCTTCTCTAATG
CGGACACCAGTCGGCAAAATCTTGAAGCGTTGCGCGCGTTTGGCTGCGCCATCGCTATTGATGACTTTGGCACCGGCTAT
GCGAACTATGAACGTCTGAAACATTTACAGGCCGATATCATTAAGATTGACGGCTGCTTCGTCCGCGACATCCTCACGGA
CCCGCTGGACGCCATCATGGTGAAATCGATTGTCGAGATGGCGCGGGCGAAACAGATGAGCGTGGTGGCGGAATATGTCG
AAAGCGAACCGCAAAAAGCGCGCTTGCTGGAGCTGGGCGTGAATTATCTGCAGGGTTATCTGATCGGTAAACCACAGCCG
CTGGGTGAATGA

Upstream 100 bases:

>100_bases
CAGACTTTTTCCTGATAATTCGCCTTGCCTGCCCTAAATAAGCAACATAACATTTCCCCCATTAAACGTGATGAGGTTTC
TGGAGTTTTAATTAACAATA

Downstream 100 bases:

>100_bases
CGGGCAAAAAAAAGCCGGGCATTGCCCGGCTCAGATGACTGACGTCTGTTACAGAACCAGCGCCGCAATCGAGGCGGACA
GCACGCTAACCAGCGTGGAG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 723; Mature: 723

Protein sequence:

>723_residues
MLDKININIKKTLLAFIICLVAIPLARFISPQTIIDGNLIYIAWLPISVMFSVIFIFGRYAIAPLILAFAITNSFLIKLT
LPQAFILLFCQLFAVFVSCAILRLMVGKRWRCGPTAKHMGARIFWGGFFAPVLLKITMYLAGQYFAFPLAITSYFGSMPL
IYTVIDIQSLISAALIFTTFLYYPMRMIISPRYARRFWQQECLPWLAPQYRSFTLYWFIALAVILTLLCAPYQSEFIAGY
LVPVIFIVYFIGISRIGHALLRISWSVSAFLLVVYNKNFLQGVQSEYSLSFVLSVLISFTICLFYMADIYARSDRNKRRW
RSQAEEDPLTGLPNLRALESHLQSCPQQAICSLRIDNLDFLSRHYGLMMGVDCKRQIIRALQPLLGAADKVFQVPGSELI
LVLDGPEPSSRLNHMVAVLNHKKFSWHNQPLDLEFGAAWGRDDGQGEGLYQMLGQLSWLSEQAGSERRVLALDEEQDLVV
DQTTEQVRLLMRVKQVLKDRALMLYAQPIQNPEGEGYHEILTRMRCGDSVIMPDRFIPLIVQFNLSQRFDMLVLETLFSM
LHKHPGQRFSVNLLPATLMQKNSAGQIIALFQRYSVSPELITIEVTEEQAFSNADTSRQNLEALRAFGCAIAIDDFGTGY
ANYERLKHLQADIIKIDGCFVRDILTDPLDAIMVKSIVEMARAKQMSVVAEYVESEPQKARLLELGVNYLQGYLIGKPQP
LGE

Sequences:

>Translated_723_residues
MLDKININIKKTLLAFIICLVAIPLARFISPQTIIDGNLIYIAWLPISVMFSVIFIFGRYAIAPLILAFAITNSFLIKLT
LPQAFILLFCQLFAVFVSCAILRLMVGKRWRCGPTAKHMGARIFWGGFFAPVLLKITMYLAGQYFAFPLAITSYFGSMPL
IYTVIDIQSLISAALIFTTFLYYPMRMIISPRYARRFWQQECLPWLAPQYRSFTLYWFIALAVILTLLCAPYQSEFIAGY
LVPVIFIVYFIGISRIGHALLRISWSVSAFLLVVYNKNFLQGVQSEYSLSFVLSVLISFTICLFYMADIYARSDRNKRRW
RSQAEEDPLTGLPNLRALESHLQSCPQQAICSLRIDNLDFLSRHYGLMMGVDCKRQIIRALQPLLGAADKVFQVPGSELI
LVLDGPEPSSRLNHMVAVLNHKKFSWHNQPLDLEFGAAWGRDDGQGEGLYQMLGQLSWLSEQAGSERRVLALDEEQDLVV
DQTTEQVRLLMRVKQVLKDRALMLYAQPIQNPEGEGYHEILTRMRCGDSVIMPDRFIPLIVQFNLSQRFDMLVLETLFSM
LHKHPGQRFSVNLLPATLMQKNSAGQIIALFQRYSVSPELITIEVTEEQAFSNADTSRQNLEALRAFGCAIAIDDFGTGY
ANYERLKHLQADIIKIDGCFVRDILTDPLDAIMVKSIVEMARAKQMSVVAEYVESEPQKARLLELGVNYLQGYLIGKPQP
LGE
>Mature_723_residues
MLDKININIKKTLLAFIICLVAIPLARFISPQTIIDGNLIYIAWLPISVMFSVIFIFGRYAIAPLILAFAITNSFLIKLT
LPQAFILLFCQLFAVFVSCAILRLMVGKRWRCGPTAKHMGARIFWGGFFAPVLLKITMYLAGQYFAFPLAITSYFGSMPL
IYTVIDIQSLISAALIFTTFLYYPMRMIISPRYARRFWQQECLPWLAPQYRSFTLYWFIALAVILTLLCAPYQSEFIAGY
LVPVIFIVYFIGISRIGHALLRISWSVSAFLLVVYNKNFLQGVQSEYSLSFVLSVLISFTICLFYMADIYARSDRNKRRW
RSQAEEDPLTGLPNLRALESHLQSCPQQAICSLRIDNLDFLSRHYGLMMGVDCKRQIIRALQPLLGAADKVFQVPGSELI
LVLDGPEPSSRLNHMVAVLNHKKFSWHNQPLDLEFGAAWGRDDGQGEGLYQMLGQLSWLSEQAGSERRVLALDEEQDLVV
DQTTEQVRLLMRVKQVLKDRALMLYAQPIQNPEGEGYHEILTRMRCGDSVIMPDRFIPLIVQFNLSQRFDMLVLETLFSM
LHKHPGQRFSVNLLPATLMQKNSAGQIIALFQRYSVSPELITIEVTEEQAFSNADTSRQNLEALRAFGCAIAIDDFGTGY
ANYERLKHLQADIIKIDGCFVRDILTDPLDAIMVKSIVEMARAKQMSVVAEYVESEPQKARLLELGVNYLQGYLIGKPQP
LGE

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 GGDEF domain [H]

Homologues:

Organism=Escherichia coli, GI87082096, Length=720, Percent_Identity=53.0555555555556, Blast_Score=784, Evalue=0.0,
Organism=Escherichia coli, GI1788849, Length=717, Percent_Identity=29.9860529986053, Blast_Score=318, Evalue=5e-88,
Organism=Escherichia coli, GI87081743, Length=240, Percent_Identity=32.0833333333333, Blast_Score=116, Evalue=6e-27,
Organism=Escherichia coli, GI1790496, Length=236, Percent_Identity=31.3559322033898, Blast_Score=112, Evalue=9e-26,
Organism=Escherichia coli, GI226510982, Length=156, Percent_Identity=34.6153846153846, Blast_Score=100, Evalue=3e-22,
Organism=Escherichia coli, GI1787541, Length=423, Percent_Identity=25.531914893617, Blast_Score=100, Evalue=5e-22,
Organism=Escherichia coli, GI1786507, Length=208, Percent_Identity=29.8076923076923, Blast_Score=93, Evalue=5e-20,
Organism=Escherichia coli, GI1788502, Length=217, Percent_Identity=30.4147465437788, Blast_Score=91, Evalue=3e-19,
Organism=Escherichia coli, GI87081921, Length=442, Percent_Identity=21.4932126696833, Blast_Score=89, Evalue=1e-18,
Organism=Escherichia coli, GI1787055, Length=258, Percent_Identity=26.3565891472868, Blast_Score=84, Evalue=4e-17,
Organism=Escherichia coli, GI87081980, Length=238, Percent_Identity=28.5714285714286, Blast_Score=82, Evalue=1e-16,
Organism=Escherichia coli, GI87081845, Length=235, Percent_Identity=27.2340425531915, Blast_Score=79, Evalue=8e-16,
Organism=Escherichia coli, GI1789650, Length=247, Percent_Identity=23.0769230769231, Blast_Score=75, Evalue=1e-14,
Organism=Escherichia coli, GI1787410, Length=168, Percent_Identity=27.3809523809524, Blast_Score=63, Evalue=7e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001054
- InterPro:   IPR000160
- InterPro:   IPR001633
- InterPro:   IPR007895 [H]

Pfam domain/function: PF00563 EAL; PF05231 MASE1 [H]

EC number: NA

Molecular weight: Translated: 82167; Mature: 82167

Theoretical pI: Translated: 8.22; Mature: 8.22

Prosite motif: PS50883 EAL

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.8 %Cys     (Translated Protein)
3.2 %Met     (Translated Protein)
5.0 %Cys+Met (Translated Protein)
1.8 %Cys     (Mature Protein)
3.2 %Met     (Mature Protein)
5.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLDKININIKKTLLAFIICLVAIPLARFISPQTIIDGNLIYIAWLPISVMFSVIFIFGRY
CCCCEECHHHHHHHHHHHHHHHHHHHHHCCCCEEECCCEEEEEHHHHHHHHHHHHHHHHH
AIAPLILAFAITNSFLIKLTLPQAFILLFCQLFAVFVSCAILRLMVGKRWRCGPTAKHMG
HHHHHHHHHHHHCCEEEEEECHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHCC
ARIFWGGFFAPVLLKITMYLAGQYFAFPLAITSYFGSMPLIYTVIDIQSLISAALIFTTF
CEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHH
LYYPMRMIISPRYARRFWQQECLPWLAPQYRSFTLYWFIALAVILTLLCAPYQSEFIAGY
HHHHHHHHHCCHHHHHHHHHHCCHHCCCCCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHH
LVPVIFIVYFIGISRIGHALLRISWSVSAFLLVVYNKNFLQGVQSEYSLSFVLSVLISFT
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEECCHHHHHHHHHHHHHHHHHHHHHHH
ICLFYMADIYARSDRNKRRWRSQAEEDPLTGLPNLRALESHLQSCPQQAICSLRIDNLDF
HHHHHHHHHHHHCCCHHHHHHHCCCCCCCCCCCCHHHHHHHHHHCHHHHHHHHCCCCHHH
LSRHYGLMMGVDCKRQIIRALQPLLGAADKVFQVPGSELILVLDGPEPSSRLNHMVAVLN
HHHHCCHHCCCCHHHHHHHHHHHHHCCCHHHHCCCCCCEEEEECCCCCHHHHHHHHHHHH
HKKFSWHNQPLDLEFGAAWGRDDGQGEGLYQMLGQLSWLSEQAGSERRVLALDEEQDLVV
CCCCCCCCCCCCEEECCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCEEEEECCCCCCCC
DQTTEQVRLLMRVKQVLKDRALMLYAQPIQNPEGEGYHEILTRMRCGDSVIMPDRFIPLI
CCHHHHHHHHHHHHHHHHHHHHEEEECCCCCCCCCCHHHHHHHHHCCCCCCCCCCCEEEE
VQFNLSQRFDMLVLETLFSMLHKHPGQRFSVNLLPATLMQKNSAGQIIALFQRYSVSPEL
EEECCHHHHHHHHHHHHHHHHHHCCCCEEEEEECHHHHHCCCCCCHHHHHHHHHCCCCCE
ITIEVTEEQAFSNADTSRQNLEALRAFGCAIAIDDFGTGYANYERLKHLQADIIKIDGCF
EEEEEEHHHHHCCCCCCHHHHHHHHHHCCEEEEECCCCCCHHHHHHHHHHHHHEEECCHH
VRDILTDPLDAIMVKSIVEMARAKQMSVVAEYVESEPQKARLLELGVNYLQGYLIGKPQP
HHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCEECCCCCC
LGE
CCC
>Mature Secondary Structure
MLDKININIKKTLLAFIICLVAIPLARFISPQTIIDGNLIYIAWLPISVMFSVIFIFGRY
CCCCEECHHHHHHHHHHHHHHHHHHHHHCCCCEEECCCEEEEEHHHHHHHHHHHHHHHHH
AIAPLILAFAITNSFLIKLTLPQAFILLFCQLFAVFVSCAILRLMVGKRWRCGPTAKHMG
HHHHHHHHHHHHCCEEEEEECHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHCC
ARIFWGGFFAPVLLKITMYLAGQYFAFPLAITSYFGSMPLIYTVIDIQSLISAALIFTTF
CEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHH
LYYPMRMIISPRYARRFWQQECLPWLAPQYRSFTLYWFIALAVILTLLCAPYQSEFIAGY
HHHHHHHHHCCHHHHHHHHHHCCHHCCCCCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHH
LVPVIFIVYFIGISRIGHALLRISWSVSAFLLVVYNKNFLQGVQSEYSLSFVLSVLISFT
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEECCHHHHHHHHHHHHHHHHHHHHHHH
ICLFYMADIYARSDRNKRRWRSQAEEDPLTGLPNLRALESHLQSCPQQAICSLRIDNLDF
HHHHHHHHHHHHCCCHHHHHHHCCCCCCCCCCCCHHHHHHHHHHCHHHHHHHHCCCCHHH
LSRHYGLMMGVDCKRQIIRALQPLLGAADKVFQVPGSELILVLDGPEPSSRLNHMVAVLN
HHHHCCHHCCCCHHHHHHHHHHHHHCCCHHHHCCCCCCEEEEECCCCCHHHHHHHHHHHH
HKKFSWHNQPLDLEFGAAWGRDDGQGEGLYQMLGQLSWLSEQAGSERRVLALDEEQDLVV
CCCCCCCCCCCCEEECCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCEEEEECCCCCCCC
DQTTEQVRLLMRVKQVLKDRALMLYAQPIQNPEGEGYHEILTRMRCGDSVIMPDRFIPLI
CCHHHHHHHHHHHHHHHHHHHHEEEECCCCCCCCCCHHHHHHHHHCCCCCCCCCCCEEEE
VQFNLSQRFDMLVLETLFSMLHKHPGQRFSVNLLPATLMQKNSAGQIIALFQRYSVSPEL
EEECCHHHHHHHHHHHHHHHHHHCCCCEEEEEECHHHHHCCCCCCHHHHHHHHHCCCCCE
ITIEVTEEQAFSNADTSRQNLEALRAFGCAIAIDDFGTGYANYERLKHLQADIIKIDGCF
EEEEEEHHHHHCCCCCCHHHHHHHHHHCCEEEEECCCCCCHHHHHHHHHHHHHEEECCHH
VRDILTDPLDAIMVKSIVEMARAKQMSVVAEYVESEPQKARLLELGVNYLQGYLIGKPQP
HHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCEECCCCCC
LGE
CCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9205837; 9278503; 2201776 [H]