Click here to switch to the map view.

The map label for this gene is yfcM [H]

Identifier: 238895847

GI number: 238895847

Start: 3790765

End: 3791313

Strand: Reverse

Name: yfcM [H]

Synonym: KP1_3966

Alternate gene names: 238895847

Gene position: 3791313-3790765 (Counterclockwise)

Preceding gene: 238895848

Following gene: 238895846

Centisome position: 72.24

GC content: 55.37

Gene sequence:

>549_bases
ATGCAACAGCAACACCATTATCAGCAGCTGATAGACCTTTTCGACAGCTGCTTTGCCGAAGAATTTAATACCCGCCTGAT
TAAAGGCGACGATGAGCCGATCTACCTTCCGGCTGACGATGAAACGCCCTATCACCGTATCGTGTTTGCGCACGGATTTT
TTGCCAGCGCCCTGCACGAGATCTCTCACTGGTGTGTCGCCGGCAAGGCGCGTCGCGAACAAGTAGATTTTGGCTACTGG
TACTGCCCGGACGGCCGCGATGCGATGACCCAAAGCCAGTTTGAGGATGTCGAGGTGAAACCGCAGGCCTTTGAGTGGCT
GTTCTGCGTGGCGGCGGGATTTCCGTTTAACGTCAGCTGTGACAATCTGGAAGGGGACGTTGAGCCCGATCGCATCGCCT
TCCAGCGCCGGGTGCATGCTCGGGTGATGACTTTACTTGAACAAGGGATCCCCGAACGTCCGGCGCGCTTTATTCGCGCG
TTACAACACTATTATCAAACGCCGCCATTGACGGCGAAACACTTTCCGTGGCCGGAAGACCTGCACTAA

Upstream 100 bases:

>100_bases
TGATCCGGCCGATGATCGTTATCGTCTCGGCGGTGATGAGCGCGAAACTTCTTTATGACAGCCACGGGGCTGAGATTTTG
CAGTGGTTGGGAATTCATTA

Downstream 100 bases:

>100_bases
GGCCGCACATTACATGACAAGAGGTAAGATGATGATCGCGGAGTTTGAATCACGCATTCTGGCGCTGATTGACAACATGG
TAGACCACGCCAGTGATGAT

Product: putative transporting ATPase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 182; Mature: 182

Protein sequence:

>182_residues
MQQQHHYQQLIDLFDSCFAEEFNTRLIKGDDEPIYLPADDETPYHRIVFAHGFFASALHEISHWCVAGKARREQVDFGYW
YCPDGRDAMTQSQFEDVEVKPQAFEWLFCVAAGFPFNVSCDNLEGDVEPDRIAFQRRVHARVMTLLEQGIPERPARFIRA
LQHYYQTPPLTAKHFPWPEDLH

Sequences:

>Translated_182_residues
MQQQHHYQQLIDLFDSCFAEEFNTRLIKGDDEPIYLPADDETPYHRIVFAHGFFASALHEISHWCVAGKARREQVDFGYW
YCPDGRDAMTQSQFEDVEVKPQAFEWLFCVAAGFPFNVSCDNLEGDVEPDRIAFQRRVHARVMTLLEQGIPERPARFIRA
LQHYYQTPPLTAKHFPWPEDLH
>Mature_182_residues
MQQQHHYQQLIDLFDSCFAEEFNTRLIKGDDEPIYLPADDETPYHRIVFAHGFFASALHEISHWCVAGKARREQVDFGYW
YCPDGRDAMTQSQFEDVEVKPQAFEWLFCVAAGFPFNVSCDNLEGDVEPDRIAFQRRVHARVMTLLEQGIPERPARFIRA
LQHYYQTPPLTAKHFPWPEDLH

Specific function: Unknown

COG id: COG3101

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: To H.influenzae HI_1563 [H]

Homologues:

Organism=Escherichia coli, GI1788666, Length=182, Percent_Identity=80.2197802197802, Blast_Score=321, Evalue=2e-89,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR007411 [H]

Pfam domain/function: PF04315 DUF462 [H]

EC number: NA

Molecular weight: Translated: 21360; Mature: 21360

Theoretical pI: Translated: 5.05; Mature: 5.05

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.7 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
4.4 %Cys+Met (Translated Protein)
2.7 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
4.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQQQHHYQQLIDLFDSCFAEEFNTRLIKGDDEPIYLPADDETPYHRIVFAHGFFASALHE
CCCHHHHHHHHHHHHHHHHHHHCCEEECCCCCEEEEECCCCCCCEEEEEEHHHHHHHHHH
ISHWCVAGKARREQVDFGYWYCPDGRDAMTQSQFEDVEVKPQAFEWLFCVAAGFPFNVSC
HHHHHHCCCHHHHCCCCCEEECCCCCCHHHHHHCCCCCCCHHHHHHHHHHHCCCCCCCCC
DNLEGDVEPDRIAFQRRVHARVMTLLEQGIPERPARFIRALQHYYQTPPLTAKHFPWPED
CCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCC
LH
CC
>Mature Secondary Structure
MQQQHHYQQLIDLFDSCFAEEFNTRLIKGDDEPIYLPADDETPYHRIVFAHGFFASALHE
CCCHHHHHHHHHHHHHHHHHHHCCEEECCCCCEEEEECCCCCCCEEEEEEHHHHHHHHHH
ISHWCVAGKARREQVDFGYWYCPDGRDAMTQSQFEDVEVKPQAFEWLFCVAAGFPFNVSC
HHHHHHCCCHHHHCCCCCEEECCCCCCHHHHHHCCCCCCCHHHHHHHHHHHCCCCCCCCC
DNLEGDVEPDRIAFQRRVHARVMTLLEQGIPERPARFIRALQHYYQTPPLTAKHFPWPED
CCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCC
LH
CC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9205837; 9278503 [H]