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The map label for this gene is ubiX [H]

Identifier: 238895831

GI number: 238895831

Start: 3774662

End: 3775231

Strand: Reverse

Name: ubiX [H]

Synonym: KP1_3948

Alternate gene names: 238895831

Gene position: 3775231-3774662 (Counterclockwise)

Preceding gene: 238895832

Following gene: 238895830

Centisome position: 71.93

GC content: 58.6

Gene sequence:

>570_bases
GTGAAACGACTGATTATTGGCATTTCCGGCGCCAGCGGCGCCATTTACGGCGTGCGGATGCTGCAGGTGCTAAGAGATGT
GCCGGATATTGAAACTCATCTCATCCTCAGCCAGGCGGCGCGCCAGACGTTGGCCATGGAGACCGACTACTCCGTACGTG
AGGTGCAGGCGCTAGCCGATGTGGTGCATGACGCCCGCGATATCGCCGCCAGTATCTCTTCCGGTTCGTTTAAAACCGCC
GGGATGGTGATTTTACCCTGCTCAATGAAGACGCTCTCGGGCATTGTCCATAGCTATACGGATGGCCTGCTGACCCGGGC
GGCGGATGTCGTGCTGAAAGAGCGTCGTCCGCTGGTGCTCTGCGTGCGGGAAACGCCGTTCCATTTGGGCCATCTGCGTC
TGCTGGTTCAGGCCGCAGATCTGGGGGCGGTGATAATGCCGCCGGTACCGGCTTTTTACCACCGGCCACAGAGCCTGGAC
GATGTCATCAACCAGACCGTCAATCGGGTACTCGATCAATTTGATATTAGTCTGGAGCACGACTTGTTTACCCGCTGGCA
GGGGGCCTAG

Upstream 100 bases:

>100_bases
GACGGCGGGCTTTTTTTCGCCCCTCAACTGTGCGTCAATAGTTGCGCCAGAGGCTATAATCCGGCAAAGTCTGCGGCACA
CGCGCAAGGGGTAACAGAAC

Downstream 100 bases:

>100_bases
TGTCGCACTATAGTGGTGCATGAAATGTACGCTTGCGCTGCGGTGGTGCAAATTTGTTGCCGCGATCAAATCCTCGACAT
TTATTTCGTCTTTTTGCGCT

Product: 3-octaprenyl-4-hydroxybenzoate carboxy-lyase

Products: NA

Alternate protein names: Polyprenyl p-hydroxybenzoate decarboxylase [H]

Number of amino acids: Translated: 189; Mature: 189

Protein sequence:

>189_residues
MKRLIIGISGASGAIYGVRMLQVLRDVPDIETHLILSQAARQTLAMETDYSVREVQALADVVHDARDIAASISSGSFKTA
GMVILPCSMKTLSGIVHSYTDGLLTRAADVVLKERRPLVLCVRETPFHLGHLRLLVQAADLGAVIMPPVPAFYHRPQSLD
DVINQTVNRVLDQFDISLEHDLFTRWQGA

Sequences:

>Translated_189_residues
MKRLIIGISGASGAIYGVRMLQVLRDVPDIETHLILSQAARQTLAMETDYSVREVQALADVVHDARDIAASISSGSFKTA
GMVILPCSMKTLSGIVHSYTDGLLTRAADVVLKERRPLVLCVRETPFHLGHLRLLVQAADLGAVIMPPVPAFYHRPQSLD
DVINQTVNRVLDQFDISLEHDLFTRWQGA
>Mature_189_residues
MKRLIIGISGASGAIYGVRMLQVLRDVPDIETHLILSQAARQTLAMETDYSVREVQALADVVHDARDIAASISSGSFKTA
GMVILPCSMKTLSGIVHSYTDGLLTRAADVVLKERRPLVLCVRETPFHLGHLRLLVQAADLGAVIMPPVPAFYHRPQSLD
DVINQTVNRVLDQFDISLEHDLFTRWQGA

Specific function: Unknown

COG id: COG0163

COG function: function code H; 3-polyprenyl-4-hydroxybenzoate decarboxylase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the polyprenyl P-hydroxybenzoate / phenylacrylic acid decarboxylases family [H]

Homologues:

Organism=Escherichia coli, GI1788650, Length=189, Percent_Identity=87.8306878306878, Blast_Score=347, Evalue=3e-97,
Organism=Saccharomyces cerevisiae, GI6320746, Length=187, Percent_Identity=47.0588235294118, Blast_Score=184, Evalue=7e-48,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003382
- InterPro:   IPR004507 [H]

Pfam domain/function: PF02441 Flavoprotein [H]

EC number: 4.1.1.-

Molecular weight: Translated: 20797; Mature: 20797

Theoretical pI: Translated: 6.88; Mature: 6.88

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
3.2 %Met     (Translated Protein)
4.2 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
3.2 %Met     (Mature Protein)
4.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKRLIIGISGASGAIYGVRMLQVLRDVPDIETHLILSQAARQTLAMETDYSVREVQALAD
CCEEEEEECCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHH
VVHDARDIAASISSGSFKTAGMVILPCSMKTLSGIVHSYTDGLLTRAADVVLKERRPLVL
HHHHHHHHHHHHCCCCCCCCCEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEE
CVRETPFHLGHLRLLVQAADLGAVIMPPVPAFYHRPQSLDDVINQTVNRVLDQFDISLEH
EEECCCCHHHHHHHHHHHHCCCEEECCCCHHHHCCCCCHHHHHHHHHHHHHHHHCCCCCH
DLFTRWQGA
HHHHHCCCC
>Mature Secondary Structure
MKRLIIGISGASGAIYGVRMLQVLRDVPDIETHLILSQAARQTLAMETDYSVREVQALAD
CCEEEEEECCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHH
VVHDARDIAASISSGSFKTAGMVILPCSMKTLSGIVHSYTDGLLTRAADVVLKERRPLVL
HHHHHHHHHHHHCCCCCCCCCEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEE
CVRETPFHLGHLRLLVQAADLGAVIMPPVPAFYHRPQSLDDVINQTVNRVLDQFDISLEH
EEECCCCHHHHHHHHHHHHCCCEEECCCCHHHHCCCCCHHHHHHHHHHHHHHHHCCCCCH
DLFTRWQGA
HHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: Carbon-Carbon Lyases; Carboxy-Lyases [C]

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]