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The map label for this gene is yfbS [H]

Identifier: 238895812

GI number: 238895812

Start: 3757944

End: 3759776

Strand: Reverse

Name: yfbS [H]

Synonym: KP1_3929

Alternate gene names: 238895812

Gene position: 3759776-3757944 (Counterclockwise)

Preceding gene: 238895813

Following gene: 238895809

Centisome position: 71.63

GC content: 58.81

Gene sequence:

>1833_bases
GTGAACGGTGAATTGATTTGGGTTTTATCCCTCCTGGCCATCGCGGTTGTGCTGTTTGCTACCGGCAAGGTGCGCATGGA
TGCTATCGCCCTGATGGTCATTGTCGCCTTTGTCCTCAGCGGAACGCTGACGTTAAATGAAGCTTTTTCCGGATTCAGCG
ATCCTAACGTGATCCTGATTGCCGCCCTGTTTATTATCGGCGATGGCCTGGTGCGCACCGGAGTCGCCACCAAAATGGGG
GCATGGCTGGTGAGCGTGGCGGGGAACAGCGAAACCAAGATGCTGATCTACCTGATGCTCACCGTCGCCGGTCTGGGCGC
GTTTATGAGCTCCACCGGGGTGGTCGCCATTTTCATCCCGGTGGTACTTAGCGTCTCGGCGCGGATGAATACCTCGCCAT
CGCGGCTGATGATGCCGCTGAGCTTCGCCGGGCTTATCAGCGGGATGATGACCCTGGTGGCGACGCCGCCCAACCTGGTG
GTCAACAGTGAATTGCTGCGCGAGGGACTGCACGGCTTCAGCTTTTTCAGCGTCACGCCGATTGGCCTGGTGGTGCTGAT
CCTGGGCATCGTCTATATGCTGGCGGTGCGCTTTATGCTGAAGACGGATAATGGCGACTCCGCACGCGATGGGCGAAAAA
GAAGCACCTTCCGCGATTTGATCCGCGAATATCACCTCACCGGCCGCGCTCGCCGGCTGGCCATCCGCCCGGGTTCGCCG
ATGATCGGTCAGCGGCTGGATGATTTAAAGCTGCGTGAGCGCTACTGCGCCAACGTGATCGGCGTTGAACGCTGGCGGCG
GTTCCGCCGGGTAATTGTCAACGTCAACGGGGTATCGGAATTTCGCGCCCGCGACGTCCTGCTAATCGATATGTCCGCCT
CCGATGTCGATTTACGCCAGTTCTGCGGCGAGCAAATGCTTGAGCCGATGGTGCTGCGCGGCGAGTATTTTGCCGATCAG
GCGCTGGATGTGGGGATGGCGGAGGTGGCGCTGATCCCGGATTCAGAGATGATGGGCAAAACGGTGCGAGAGATAGCCTT
CCGCACCCGGTTTGGTCTCAATATCGTCGGCATGAAGCGCGATGGCAAAGCGATGGATGGTTCGGTGGTCGACGAGCCGC
TGCAGCTCGGCGATATCCTGCTGGTGGTCGGCAACTGGCGGCAAATTGCCTTGCTGGCGAAGCGCGGCCGGGATTTCGTG
GTGCTCAATATGCCGGTTGAGGTCGATGACGCTTCGCCGGCCCACAGCCAGGCTCCGCATGCGATTTTCTGCCTGGTGCT
GATGGTAGCCCTGATGCTCACCGATGAAATTCCCAACCCGATTGCCGCGATTATCGCCTGTCTGCTGATGGGCAAATTCC
GCTGCATCAATGCCGAAAGCGCCTACAAGGCGATCCACTGGCCGAGCATTATTTTGATTGTTGGGATGATGCCGTTTGCC
CTGGCGCTGCAAAAAACCGGCGGGGTGGATCTGGTGGTGAAGGGACTGATGGATGTCGCCGGAGGCGAGGGGCCTTATCT
GATGCTCGGCTGCCTGTTCGTGATGTGCGCGGCGATTGGGCTGTTTATCTCAAACACCGCCACGGCGGTGCTGATGGCGC
CTATTGCCTTAGCGGCGGCGAAGTCAATGGGCGTCTCACCCTATCCTTTTGCCATGGTGGTGGCGATGGCGGCTTCGGCG
GCGTTTATGACCCCGGTCTCCTCGCCGGTTAACACCCTGGTGCTTGGCCCGGGCAAGTACTCATTTAGCGATTTTGTCAA
AATAGGCGTGCCCTTTACCATACTGGTGATGGTGGTCTGCGTCCTGCTAATCCCGGTACTGTTTCCGTTTTAA

Upstream 100 bases:

>100_bases
GTAAATGTGCGTCTTAAAGCGTAAACCCATGATTTCGCCCCGCGTCGTCGGGGCTTTTTTATGCCACTATGTCGACTCCC
ACTTGTGACAAGGAAACGTT

Downstream 100 bases:

>100_bases
GATATTCTGGCCGGGTAGAGCACAACCGCCGCCCGGCCAGAACCTTACAGCGGCGAATCCTGGCTAATTTCGTCCAGCGA
CAGCTGGAAGCTTGGGACGA

Product: putative membrane-associated response regulator

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 610; Mature: 610

Protein sequence:

>610_residues
MNGELIWVLSLLAIAVVLFATGKVRMDAIALMVIVAFVLSGTLTLNEAFSGFSDPNVILIAALFIIGDGLVRTGVATKMG
AWLVSVAGNSETKMLIYLMLTVAGLGAFMSSTGVVAIFIPVVLSVSARMNTSPSRLMMPLSFAGLISGMMTLVATPPNLV
VNSELLREGLHGFSFFSVTPIGLVVLILGIVYMLAVRFMLKTDNGDSARDGRKRSTFRDLIREYHLTGRARRLAIRPGSP
MIGQRLDDLKLRERYCANVIGVERWRRFRRVIVNVNGVSEFRARDVLLIDMSASDVDLRQFCGEQMLEPMVLRGEYFADQ
ALDVGMAEVALIPDSEMMGKTVREIAFRTRFGLNIVGMKRDGKAMDGSVVDEPLQLGDILLVVGNWRQIALLAKRGRDFV
VLNMPVEVDDASPAHSQAPHAIFCLVLMVALMLTDEIPNPIAAIIACLLMGKFRCINAESAYKAIHWPSIILIVGMMPFA
LALQKTGGVDLVVKGLMDVAGGEGPYLMLGCLFVMCAAIGLFISNTATAVLMAPIALAAAKSMGVSPYPFAMVVAMAASA
AFMTPVSSPVNTLVLGPGKYSFSDFVKIGVPFTILVMVVCVLLIPVLFPF

Sequences:

>Translated_610_residues
MNGELIWVLSLLAIAVVLFATGKVRMDAIALMVIVAFVLSGTLTLNEAFSGFSDPNVILIAALFIIGDGLVRTGVATKMG
AWLVSVAGNSETKMLIYLMLTVAGLGAFMSSTGVVAIFIPVVLSVSARMNTSPSRLMMPLSFAGLISGMMTLVATPPNLV
VNSELLREGLHGFSFFSVTPIGLVVLILGIVYMLAVRFMLKTDNGDSARDGRKRSTFRDLIREYHLTGRARRLAIRPGSP
MIGQRLDDLKLRERYCANVIGVERWRRFRRVIVNVNGVSEFRARDVLLIDMSASDVDLRQFCGEQMLEPMVLRGEYFADQ
ALDVGMAEVALIPDSEMMGKTVREIAFRTRFGLNIVGMKRDGKAMDGSVVDEPLQLGDILLVVGNWRQIALLAKRGRDFV
VLNMPVEVDDASPAHSQAPHAIFCLVLMVALMLTDEIPNPIAAIIACLLMGKFRCINAESAYKAIHWPSIILIVGMMPFA
LALQKTGGVDLVVKGLMDVAGGEGPYLMLGCLFVMCAAIGLFISNTATAVLMAPIALAAAKSMGVSPYPFAMVVAMAASA
AFMTPVSSPVNTLVLGPGKYSFSDFVKIGVPFTILVMVVCVLLIPVLFPF
>Mature_610_residues
MNGELIWVLSLLAIAVVLFATGKVRMDAIALMVIVAFVLSGTLTLNEAFSGFSDPNVILIAALFIIGDGLVRTGVATKMG
AWLVSVAGNSETKMLIYLMLTVAGLGAFMSSTGVVAIFIPVVLSVSARMNTSPSRLMMPLSFAGLISGMMTLVATPPNLV
VNSELLREGLHGFSFFSVTPIGLVVLILGIVYMLAVRFMLKTDNGDSARDGRKRSTFRDLIREYHLTGRARRLAIRPGSP
MIGQRLDDLKLRERYCANVIGVERWRRFRRVIVNVNGVSEFRARDVLLIDMSASDVDLRQFCGEQMLEPMVLRGEYFADQ
ALDVGMAEVALIPDSEMMGKTVREIAFRTRFGLNIVGMKRDGKAMDGSVVDEPLQLGDILLVVGNWRQIALLAKRGRDFV
VLNMPVEVDDASPAHSQAPHAIFCLVLMVALMLTDEIPNPIAAIIACLLMGKFRCINAESAYKAIHWPSIILIVGMMPFA
LALQKTGGVDLVVKGLMDVAGGEGPYLMLGCLFVMCAAIGLFISNTATAVLMAPIALAAAKSMGVSPYPFAMVVAMAASA
AFMTPVSSPVNTLVLGPGKYSFSDFVKIGVPFTILVMVVCVLLIPVLFPF

Specific function: Unknown

COG id: COG0471

COG function: function code P; Di- and tricarboxylate transporters

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein (Probable) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 2 RCK C-terminal domains [H]

Homologues:

Organism=Escherichia coli, GI1788629, Length=610, Percent_Identity=85.2459016393443, Blast_Score=1041, Evalue=0.0,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004680
- InterPro:   IPR001898
- InterPro:   IPR006037 [H]

Pfam domain/function: PF03600 CitMHS; PF02080 TrkA_C [H]

EC number: NA

Molecular weight: Translated: 65843; Mature: 65843

Theoretical pI: Translated: 8.55; Mature: 8.55

Prosite motif: PS01271 NA_SULFATE

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
6.2 %Met     (Translated Protein)
7.5 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
6.2 %Met     (Mature Protein)
7.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNGELIWVLSLLAIAVVLFATGKVRMDAIALMVIVAFVLSGTLTLNEAFSGFSDPNVILI
CCCCEEHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCEEEHHHHCCCCCCCHHHH
AALFIIGDGLVRTGVATKMGAWLVSVAGNSETKMLIYLMLTVAGLGAFMSSTGVVAIFIP
HHHHHHCCCHHHHCHHHHHHHEEEEECCCCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHH
VVLSVSARMNTSPSRLMMPLSFAGLISGMMTLVATPPNLVVNSELLREGLHGFSFFSVTP
HHHHHHHCCCCCHHHEEHHHHHHHHHHHHHHHHCCCCCCEECHHHHHHHCCCCCHHHHHH
IGLVVLILGIVYMLAVRFMLKTDNGDSARDGRKRSTFRDLIREYHLTGRARRLAIRPGSP
HHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCEEEEECCCCC
MIGQRLDDLKLRERYCANVIGVERWRRFRRVIVNVNGVSEFRARDVLLIDMSASDVDLRQ
HHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHEEECCCCHHHCCCCEEEEECCCCCCHHHH
FCGEQMLEPMVLRGEYFADQALDVGMAEVALIPDSEMMGKTVREIAFRTRFGLNIVGMKR
HHHHHHHCHHHHCCHHHHHHHHCCCCHHEEECCCHHHHHHHHHHHHHHHHCCCEEEEECC
DGKAMDGSVVDEPLQLGDILLVVGNWRQIALLAKRGRDFVVLNMPVEVDDASPAHSQAPH
CCCCCCCCHHCCCHHHCCEEEEECCCHHHHHHHHCCCCEEEEECCEEECCCCCCCCCCCH
AIFCLVLMVALMLTDEIPNPIAAIIACLLMGKFRCINAESAYKAIHWPSIILIVGMMPFA
HHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCEEECCHHHHHHHCCHHHHHHHHHHHHH
LALQKTGGVDLVVKGLMDVAGGEGPYLMLGCLFVMCAAIGLFISNTATAVLMAPIALAAA
HHHHCCCCHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
KSMGVSPYPFAMVVAMAASAAFMTPVSSPVNTLVLGPGKYSFSDFVKIGVPFTILVMVVC
HHCCCCCCHHHHHHHHHHHHHHHCCCCCCCCEEEECCCCCCHHHHHHHCCCHHHHHHHHH
VLLIPVLFPF
HHHHHHHCCC
>Mature Secondary Structure
MNGELIWVLSLLAIAVVLFATGKVRMDAIALMVIVAFVLSGTLTLNEAFSGFSDPNVILI
CCCCEEHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCEEEHHHHCCCCCCCHHHH
AALFIIGDGLVRTGVATKMGAWLVSVAGNSETKMLIYLMLTVAGLGAFMSSTGVVAIFIP
HHHHHHCCCHHHHCHHHHHHHEEEEECCCCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHH
VVLSVSARMNTSPSRLMMPLSFAGLISGMMTLVATPPNLVVNSELLREGLHGFSFFSVTP
HHHHHHHCCCCCHHHEEHHHHHHHHHHHHHHHHCCCCCCEECHHHHHHHCCCCCHHHHHH
IGLVVLILGIVYMLAVRFMLKTDNGDSARDGRKRSTFRDLIREYHLTGRARRLAIRPGSP
HHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCEEEEECCCCC
MIGQRLDDLKLRERYCANVIGVERWRRFRRVIVNVNGVSEFRARDVLLIDMSASDVDLRQ
HHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHEEECCCCHHHCCCCEEEEECCCCCCHHHH
FCGEQMLEPMVLRGEYFADQALDVGMAEVALIPDSEMMGKTVREIAFRTRFGLNIVGMKR
HHHHHHHCHHHHCCHHHHHHHHCCCCHHEEECCCHHHHHHHHHHHHHHHHCCCEEEEECC
DGKAMDGSVVDEPLQLGDILLVVGNWRQIALLAKRGRDFVVLNMPVEVDDASPAHSQAPH
CCCCCCCCHHCCCHHHCCEEEEECCCHHHHHHHHCCCCEEEEECCEEECCCCCCCCCCCH
AIFCLVLMVALMLTDEIPNPIAAIIACLLMGKFRCINAESAYKAIHWPSIILIVGMMPFA
HHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCEEECCHHHHHHHCCHHHHHHHHHHHHH
LALQKTGGVDLVVKGLMDVAGGEGPYLMLGCLFVMCAAIGLFISNTATAVLMAPIALAAA
HHHHCCCCHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
KSMGVSPYPFAMVVAMAASAAFMTPVSSPVNTLVLGPGKYSFSDFVKIGVPFTILVMVVC
HHCCCCCCHHHHHHHHHHHHHHHCCCCCCCCEEEECCCCCCHHHHHHHCCCHHHHHHHHH
VLLIPVLFPF
HHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]