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The map label for this gene is allS [H]

Identifier: 238895746

GI number: 238895746

Start: 3680264

End: 3681151

Strand: Reverse

Name: allS [H]

Synonym: KP1_3850

Alternate gene names: 238895746

Gene position: 3681151-3680264 (Counterclockwise)

Preceding gene: 238895748

Following gene: 238895743

Centisome position: 70.14

GC content: 61.15

Gene sequence:

>888_bases
ATGAAAACCCTACAGTATTCATTCGCACAGATTGAAGCCTTCGCGACGATTGCTGAGACCGGCAGCCTGTCGCAGGCGGC
CATTCGTTTAGCTAAAGACCGGACCACGCTGCGCGATCTGCTGGACTATCTGGAAGATGCGCTGGGCTACCGGCTGTTCA
GCCGTGAAGGACGTAGCCTGACGCTAACTGCCGAGGGCGAGCAGCTGTTTCGCCAGGCGCATCTGCTGTTGCGTCAGGCG
CAGGCTTTCGAGTCTTTTGCGCAAACGCTGCCGCAAACCGCCGGGCAGGCGCTGCGTCTGGTGTACGATCCCTTCGTGCC
GCGTGAATTTCTCTGTGCGCTGGCCGATAACCTGGCCCGACGGCAGATCCGCCTGAGCTGCTGGAGCGCCTCGCGTCGCG
AAGCCGAGCAGGCGCTGAGCGATGGCGTGGCGGAGATGGCGATTTGTCAGGCTAACAACCGCACGCTGGGGAGCGAAATG
GAGTGGCGGGCGCTCGGCACCGTGGATCTGCGTTTCTACGCGGCGGACAGCCTGTTCCACGACGCTCCGCGGCCGCTGAC
GCTATTGAATCTTTCGTTGACGCCGCAGTTAGTGATGCACCGGCGCAGTGACGATCAAATCGCCCGCCGGCTGCAGATTT
CCGGCCATACGCTGTATATGAATGAAATTACCCTGTTGCGCCATGCGCTGGAGCAGGGGAGGGGCTGGGGGTTTTTACCG
GACCATTTGCGGCCAGGCGAGTGGCAGGGAGTCAGTGAAATCGCGACGGAGGTCGGCAGTCAGGGGCTGAACGTCACTAT
GGTGATGCTCTGGCTGCCCGGAATGAATAAGCATCGGATGCTTAGCGACATCGTGCACGAGGCGCCGGAGCTTTGGCTGC
GCAGATAA

Upstream 100 bases:

>100_bases
ATTTCCTCGTTTGCCATAGATTCGCTGCGCAGTATATAAATCGGCGCGCGCCGGCTAAAATCAGCACATGGGGGATTTTC
CCCCTTAAGGGAGAAAAAGG

Downstream 100 bases:

>100_bases
CAAAACGCCCCGGAGCCTGAGACCCCGGGGCGCTTGCCATACAACTTGCTATCGGCGATTACGCGCGAACGAAGTCGATG
TGAGTCAGTTTCGGCTTGAA

Product: putative LysR-family transcriptional regulator

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 295; Mature: 295

Protein sequence:

>295_residues
MKTLQYSFAQIEAFATIAETGSLSQAAIRLAKDRTTLRDLLDYLEDALGYRLFSREGRSLTLTAEGEQLFRQAHLLLRQA
QAFESFAQTLPQTAGQALRLVYDPFVPREFLCALADNLARRQIRLSCWSASRREAEQALSDGVAEMAICQANNRTLGSEM
EWRALGTVDLRFYAADSLFHDAPRPLTLLNLSLTPQLVMHRRSDDQIARRLQISGHTLYMNEITLLRHALEQGRGWGFLP
DHLRPGEWQGVSEIATEVGSQGLNVTMVMLWLPGMNKHRMLSDIVHEAPELWLRR

Sequences:

>Translated_295_residues
MKTLQYSFAQIEAFATIAETGSLSQAAIRLAKDRTTLRDLLDYLEDALGYRLFSREGRSLTLTAEGEQLFRQAHLLLRQA
QAFESFAQTLPQTAGQALRLVYDPFVPREFLCALADNLARRQIRLSCWSASRREAEQALSDGVAEMAICQANNRTLGSEM
EWRALGTVDLRFYAADSLFHDAPRPLTLLNLSLTPQLVMHRRSDDQIARRLQISGHTLYMNEITLLRHALEQGRGWGFLP
DHLRPGEWQGVSEIATEVGSQGLNVTMVMLWLPGMNKHRMLSDIVHEAPELWLRR
>Mature_295_residues
MKTLQYSFAQIEAFATIAETGSLSQAAIRLAKDRTTLRDLLDYLEDALGYRLFSREGRSLTLTAEGEQLFRQAHLLLRQA
QAFESFAQTLPQTAGQALRLVYDPFVPREFLCALADNLARRQIRLSCWSASRREAEQALSDGVAEMAICQANNRTLGSEM
EWRALGTVDLRFYAADSLFHDAPRPLTLLNLSLTPQLVMHRRSDDQIARRLQISGHTLYMNEITLLRHALEQGRGWGFLP
DHLRPGEWQGVSEIATEVGSQGLNVTMVMLWLPGMNKHRMLSDIVHEAPELWLRR

Specific function: Positive regulator essential for the expression of AllD operon. Binds to the AllD promoter [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 HTH lysR-type DNA-binding domain [H]

Homologues:

Organism=Escherichia coli, GI1786713, Length=248, Percent_Identity=29.4354838709677, Blast_Score=68, Evalue=6e-13,

Paralogues:

None

Copy number: 10-20 Molecules/Cell [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000847
- InterPro:   IPR005119
- InterPro:   IPR011991 [H]

Pfam domain/function: PF00126 HTH_1; PF03466 LysR_substrate [H]

EC number: NA

Molecular weight: Translated: 33492; Mature: 33492

Theoretical pI: Translated: 6.96; Mature: 6.96

Prosite motif: PS50931 HTH_LYSR

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
3.1 %Met     (Translated Protein)
4.1 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
3.1 %Met     (Mature Protein)
4.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKTLQYSFAQIEAFATIAETGSLSQAAIRLAKDRTTLRDLLDYLEDALGYRLFSREGRSL
CCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEE
TLTAEGEQLFRQAHLLLRQAQAFESFAQTLPQTAGQALRLVYDPFVPREFLCALADNLAR
EEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHH
RQIRLSCWSASRREAEQALSDGVAEMAICQANNRTLGSEMEWRALGTVDLRFYAADSLFH
HHHHHHHHHHHHHHHHHHHHCCHHHHHHHCCCCCCCCCCCCEEEECEEEEEEEEHHHHHC
DAPRPLTLLNLSLTPQLVMHRRSDDQIARRLQISGHTLYMNEITLLRHALEQGRGWGFLP
CCCCCEEEEEECCCHHHHHHCCCHHHHHHHHHHCCCEEEHHHHHHHHHHHHHCCCCCCCC
DHLRPGEWQGVSEIATEVGSQGLNVTMVMLWLPGMNKHRMLSDIVHEAPELWLRR
CCCCCCCCCCHHHHHHHHCCCCCCEEEEEEECCCCCHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MKTLQYSFAQIEAFATIAETGSLSQAAIRLAKDRTTLRDLLDYLEDALGYRLFSREGRSL
CCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEE
TLTAEGEQLFRQAHLLLRQAQAFESFAQTLPQTAGQALRLVYDPFVPREFLCALADNLAR
EEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHH
RQIRLSCWSASRREAEQALSDGVAEMAICQANNRTLGSEMEWRALGTVDLRFYAADSLFH
HHHHHHHHHHHHHHHHHHHHCCHHHHHHHCCCCCCCCCCCCEEEECEEEEEEEEHHHHHC
DAPRPLTLLNLSLTPQLVMHRRSDDQIARRLQISGHTLYMNEITLLRHALEQGRGWGFLP
CCCCCEEEEEECCCHHHHHHCCCHHHHHHHHHHCCCEEEHHHHHHHHHHHHHCCCCCCCC
DHLRPGEWQGVSEIATEVGSQGLNVTMVMLWLPGMNKHRMLSDIVHEAPELWLRR
CCCCCCCCCCHHHHHHHHCCCCCCEEEEEEECCCCCHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: DNA [C]

Specific reaction: Protein + DNA = Protein-DNA [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]