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The map label for this gene is yohJ [C]

Identifier: 238895708

GI number: 238895708

Start: 3637127

End: 3637561

Strand: Direct

Name: yohJ [C]

Synonym: KP1_3809

Alternate gene names: 238895708

Gene position: 3637127-3637561 (Clockwise)

Preceding gene: 238895701

Following gene: 238895709

Centisome position: 69.3

GC content: 53.79

Gene sequence:

>435_bases
TTGTATGATGAATGCACTTCATCAAGGGTTATTACCATGAGTAAATCGCTGACTATTATCTGGCAGTACCTGCGGGCTTT
CGTCCTGATTTACGCCTGCCTGTACGCCGGAATTTTTATCGCCGGGCTGCTGCCTATCACTATCCCCGGCAGCATCATCG
GCATGCTGATCCTCTTCGTGCTGCTGGCGCTGCAAATTATGCCGCCGCAATGGGTCAACCCCGGCTGCAATATCCTGATC
CGCTATATGGCGCTGCTGTTCGTGCCGATCGGCGTTGGGGTGATGCAGTACTGGGATCTGCTGCGCGCCCAGCTGGGGCC
TGTCGTTATCTCCTGCGCCATCAGTACGCTGGTGGTGTTTGTAGTGGTGAGCTGGAGCTCCCATTTGGTGCATGGCGAAC
GTAAAGTGATTGGCCAAAAAGGAAAAGAAGAATGA

Upstream 100 bases:

>100_bases
CAAGGTGTCGGGCCCTGACGGGTGAGACTATGGTTCCCGTAAGCTATCAGCGCTATGCATAGAATTCATGATGTGATCGG
TAGCACATTTTAGGGATTAA

Downstream 100 bases:

>100_bases
TGCATGAAATCTGGTGGTCGCTACCGCTAACCCTGATCGTCTTTTTTCTCGCCCGCAAACTGGCGGCCCGCTTTAAGTTC
CCGCTGCTCAACCCGCTGCT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 144; Mature: 144

Protein sequence:

>144_residues
MYDECTSSRVITMSKSLTIIWQYLRAFVLIYACLYAGIFIAGLLPITIPGSIIGMLILFVLLALQIMPPQWVNPGCNILI
RYMALLFVPIGVGVMQYWDLLRAQLGPVVISCAISTLVVFVVVSWSSHLVHGERKVIGQKGKEE

Sequences:

>Translated_144_residues
MYDECTSSRVITMSKSLTIIWQYLRAFVLIYACLYAGIFIAGLLPITIPGSIIGMLILFVLLALQIMPPQWVNPGCNILI
RYMALLFVPIGVGVMQYWDLLRAQLGPVVISCAISTLVVFVVVSWSSHLVHGERKVIGQKGKEE
>Mature_144_residues
MYDECTSSRVITMSKSLTIIWQYLRAFVLIYACLYAGIFIAGLLPITIPGSIIGMLILFVLLALQIMPPQWVNPGCNILI
RYMALLFVPIGVGVMQYWDLLRAQLGPVVISCAISTLVVFVVVSWSSHLVHGERKVIGQKGKEE

Specific function: Unknown

COG id: COG1380

COG function: function code R; Putative effector of murein hydrolase LrgA

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0299 family [H]

Homologues:

Organism=Escherichia coli, GI1788463, Length=132, Percent_Identity=87.1212121212121, Blast_Score=236, Evalue=5e-64,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005538
- InterPro:   IPR022957 [H]

Pfam domain/function: PF03788 LrgA [H]

EC number: NA

Molecular weight: Translated: 16015; Mature: 16015

Theoretical pI: Translated: 8.62; Mature: 8.62

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.8 %Cys     (Translated Protein)
4.2 %Met     (Translated Protein)
6.9 %Cys+Met (Translated Protein)
2.8 %Cys     (Mature Protein)
4.2 %Met     (Mature Protein)
6.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MYDECTSSRVITMSKSLTIIWQYLRAFVLIYACLYAGIFIAGLLPITIPGSIIGMLILFV
CCCCCCCCCEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHH
LLALQIMPPQWVNPGCNILIRYMALLFVPIGVGVMQYWDLLRAQLGPVVISCAISTLVVF
HHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
VVVSWSSHLVHGERKVIGQKGKEE
HHHHHHHHHHHHHHHHHCCCCCCC
>Mature Secondary Structure
MYDECTSSRVITMSKSLTIIWQYLRAFVLIYACLYAGIFIAGLLPITIPGSIIGMLILFV
CCCCCCCCCEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHH
LLALQIMPPQWVNPGCNILIRYMALLFVPIGVGVMQYWDLLRAQLGPVVISCAISTLVVF
HHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
VVVSWSSHLVHGERKVIGQKGKEE
HHHHHHHHHHHHHHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: NA