Click here to switch to the map view.

The map label for this gene is yohC [H]

Identifier: 238895698

GI number: 238895698

Start: 3626697

End: 3627284

Strand: Reverse

Name: yohC [H]

Synonym: KP1_3799

Alternate gene names: 238895698

Gene position: 3627284-3626697 (Counterclockwise)

Preceding gene: 238895700

Following gene: 238895697

Centisome position: 69.11

GC content: 57.82

Gene sequence:

>588_bases
ATGAACCATGTCTGGGGGCTCTTCGCTCATCCCAACCGGGAAATGAGCGTGATTAAGAGCGAGAATGAAACCATTTCTCA
TCACTATACGCATCATGTGCTGCTGATGGCGGCGGTTCCGGTAATCTGCGCCTTTATCGGCACCACGCAGCTGGGCTGGA
ACTTCGGCGATGGCACCGTGATTAAACTGTCGATGCTGACCGGACTGGCGCTGGCGGTGCTGTTTTACGCCGTGATGCTC
GCCGGGGTGGCGATCATGGGGCGGGTCATTTGGTGGATGGCGAGGCAGTATCCGCAGCAGCCTTCCCTGAAACGCTGCAT
GGTGTTTGCCGGCTACGTCGCCACCCCGCTGTTTCTGAGCGGGATTGTGGCGCTCTATCCGCTGGTCTGGCTGTGCGCGC
TGGTCGGTACTATTGCGCTGTTCTATACCGGGTATCTGCTGTATCTCGGCATTCCGACCTTCCTGAGCATTAATCGGGAA
GAGGGGTTAAGCTTTGCCAGCTCGACGCTAGCTATTGGGGTACTGGTGCTGGAAGTGCTGCTGGCCATCACCGTGGTGCT
CTGGGGGTATGGCTACCGACTCTTCTGA

Upstream 100 bases:

>100_bases
AACGCGGCGACGCAGAATTTTCTGTGCTGTACATAAAATAATCTACAGGGTGAATTATACTTGGATCAGTGCAGTACGAA
GCCGTGACAAGGGGGACGCT

Downstream 100 bases:

>100_bases
TCGGGCGACACGGGTAAATATGCATTGCCGGCAAATATGTATTTTATGTCGGCAATGCAGCATTTCTTCACGATTCTTAT
TAGGCACAGGGCCTTACGGC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 195; Mature: 195

Protein sequence:

>195_residues
MNHVWGLFAHPNREMSVIKSENETISHHYTHHVLLMAAVPVICAFIGTTQLGWNFGDGTVIKLSMLTGLALAVLFYAVML
AGVAIMGRVIWWMARQYPQQPSLKRCMVFAGYVATPLFLSGIVALYPLVWLCALVGTIALFYTGYLLYLGIPTFLSINRE
EGLSFASSTLAIGVLVLEVLLAITVVLWGYGYRLF

Sequences:

>Translated_195_residues
MNHVWGLFAHPNREMSVIKSENETISHHYTHHVLLMAAVPVICAFIGTTQLGWNFGDGTVIKLSMLTGLALAVLFYAVML
AGVAIMGRVIWWMARQYPQQPSLKRCMVFAGYVATPLFLSGIVALYPLVWLCALVGTIALFYTGYLLYLGIPTFLSINRE
EGLSFASSTLAIGVLVLEVLLAITVVLWGYGYRLF
>Mature_195_residues
MNHVWGLFAHPNREMSVIKSENETISHHYTHHVLLMAAVPVICAFIGTTQLGWNFGDGTVIKLSMLTGLALAVLFYAVML
AGVAIMGRVIWWMARQYPQQPSLKRCMVFAGYVATPLFLSGIVALYPLVWLCALVGTIALFYTGYLLYLGIPTFLSINRE
EGLSFASSTLAIGVLVLEVLLAITVVLWGYGYRLF

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI87082055, Length=195, Percent_Identity=86.6666666666667, Blast_Score=333, Evalue=4e-93,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006977 [H]

Pfam domain/function: PF04893 Yip1 [H]

EC number: NA

Molecular weight: Translated: 21577; Mature: 21577

Theoretical pI: Translated: 8.45; Mature: 8.45

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.5 %Cys     (Translated Protein)
4.1 %Met     (Translated Protein)
5.6 %Cys+Met (Translated Protein)
1.5 %Cys     (Mature Protein)
4.1 %Met     (Mature Protein)
5.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNHVWGLFAHPNREMSVIKSENETISHHYTHHVLLMAAVPVICAFIGTTQLGWNFGDGTV
CCCCEEEEECCCCCHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCE
IKLSMLTGLALAVLFYAVMLAGVAIMGRVIWWMARQYPQQPSLKRCMVFAGYVATPLFLS
EHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHH
GIVALYPLVWLCALVGTIALFYTGYLLYLGIPTFLSINREEGLSFASSTLAIGVLVLEVL
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHCCHHHHHHHHHHHHHHHHH
LAITVVLWGYGYRLF
HHHHHHHHHCCHHCC
>Mature Secondary Structure
MNHVWGLFAHPNREMSVIKSENETISHHYTHHVLLMAAVPVICAFIGTTQLGWNFGDGTV
CCCCEEEEECCCCCHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCE
IKLSMLTGLALAVLFYAVMLAGVAIMGRVIWWMARQYPQQPSLKRCMVFAGYVATPLFLS
EHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHH
GIVALYPLVWLCALVGTIALFYTGYLLYLGIPTFLSINREEGLSFASSTLAIGVLVLEVL
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHCCHHHHHHHHHHHHHHHHH
LAITVVLWGYGYRLF
HHHHHHHHHCCHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 12471157 [H]