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The map label for this gene is yniC [H]

Identifier: 238895661

GI number: 238895661

Start: 3581871

End: 3582533

Strand: Reverse

Name: yniC [H]

Synonym: KP1_3757

Alternate gene names: 238895661

Gene position: 3582533-3581871 (Counterclockwise)

Preceding gene: 238895662

Following gene: 238895660

Centisome position: 68.26

GC content: 59.28

Gene sequence:

>663_bases
ATGGGTATGCAGGCGGTTATTTTTGACATGGATGGCGTGATTATTGATTCCGAGGCGCTGTGGCGTCAGGCGCAGATTGA
CGCCCTCGCGCAGTGGGGGGCAACGGCGAGCGTTGCTGAATGTGAAACCCTGACCAAGGGCAAGCGCCTCGACGACATTG
CCGGCACCTGGTGCCGCTATTTTCAGCTTGATCTCGCTCCGCAGCGGCTTGAAGACGCCATCCTGCAGCGCATCACCCGC
CTGATTGCCGCGAAAGGCGAACCGATGCGCGGGGTGCAGGAGGCGTTACGCTATTTTCGCGAAGCGGGTTATAAGATTGC
GCTCGCCACGTCATCATCTCGTCAGGTTATTGCCGCTGTGCTGAACAAGCTTTCGCTCTGGCACTTTTTTGACGCGATCT
CCAGCGCGGATGATGAACCACGCGGCAAACCGCACCCGGCGGTGTACCTCACGACGCTGCGGAAGCTCAATCTCAACGCC
AGCCAGTGTCTGGTGATTGAGGATAGCTTTACCGGCTTTTGCGCGGCCCAGTCGGCGGGGATTGCCACGATAGTGATTGC
AGAAGATAGCCAGCAGGCGCGTTTTCAGGCCGCCGCTGGCCGCTATCAAACCTTACCTGAACTGCTGGAAGCGCTTAGCG
CGGAGCCAGCGGCGGCGGTTTAA

Upstream 100 bases:

>100_bases
GGGGTTCTCCCACAAGGAAGCAACCGCCCGCGAGCAGGTTGAATTCTCATAGGTACTGCGGCTGGCATGCGCCTCATGCC
AGCCTTAATGAGGTGAACGA

Downstream 100 bases:

>100_bases
GTCAGCCATTTGTGGGCGCAGACATTCCCGGGATGTAGCTGGTCGGTTAATCTCTTTTCTGCGCTCACGCCCTTTTTTCT
CCTGGTCGATCTGCCTCACA

Product: putative enzyme

Products: glycerol; phosphate

Alternate protein names: NA

Number of amino acids: Translated: 220; Mature: 219

Protein sequence:

>220_residues
MGMQAVIFDMDGVIIDSEALWRQAQIDALAQWGATASVAECETLTKGKRLDDIAGTWCRYFQLDLAPQRLEDAILQRITR
LIAAKGEPMRGVQEALRYFREAGYKIALATSSSRQVIAAVLNKLSLWHFFDAISSADDEPRGKPHPAVYLTTLRKLNLNA
SQCLVIEDSFTGFCAAQSAGIATIVIAEDSQQARFQAAAGRYQTLPELLEALSAEPAAAV

Sequences:

>Translated_220_residues
MGMQAVIFDMDGVIIDSEALWRQAQIDALAQWGATASVAECETLTKGKRLDDIAGTWCRYFQLDLAPQRLEDAILQRITR
LIAAKGEPMRGVQEALRYFREAGYKIALATSSSRQVIAAVLNKLSLWHFFDAISSADDEPRGKPHPAVYLTTLRKLNLNA
SQCLVIEDSFTGFCAAQSAGIATIVIAEDSQQARFQAAAGRYQTLPELLEALSAEPAAAV
>Mature_219_residues
GMQAVIFDMDGVIIDSEALWRQAQIDALAQWGATASVAECETLTKGKRLDDIAGTWCRYFQLDLAPQRLEDAILQRITRL
IAAKGEPMRGVQEALRYFREAGYKIALATSSSRQVIAAVLNKLSLWHFFDAISSADDEPRGKPHPAVYLTTLRKLNLNAS
QCLVIEDSFTGFCAAQSAGIATIVIAEDSQQARFQAAAGRYQTLPELLEALSAEPAAAV

Specific function: Catalyzes the dephosphorylation of the artificial chromogenic substrate p-nitrophenyl phosphate (pNPP) and of the natural substrates 2-deoxyglucose 6-phosphate and mannose 6- phosphate [H]

COG id: COG0637

COG function: function code R; Predicted phosphatase/phosphohexomutase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the HAD-like hydrolase superfamily. CbbY/CbbZ/Gph/YieH family [H]

Homologues:

Organism=Escherichia coli, GI1788021, Length=208, Percent_Identity=34.1346153846154, Blast_Score=112, Evalue=1e-26,
Organism=Escherichia coli, GI1789046, Length=180, Percent_Identity=28.8888888888889, Blast_Score=77, Evalue=1e-15,
Organism=Escherichia coli, GI1790151, Length=191, Percent_Identity=24.0837696335079, Blast_Score=70, Evalue=9e-14,
Organism=Caenorhabditis elegans, GI17554716, Length=197, Percent_Identity=26.9035532994924, Blast_Score=71, Evalue=4e-13,
Organism=Drosophila melanogaster, GI20129151, Length=192, Percent_Identity=26.0416666666667, Blast_Score=73, Evalue=2e-13,
Organism=Drosophila melanogaster, GI17137324, Length=194, Percent_Identity=27.8350515463918, Blast_Score=67, Evalue=9e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005834
- InterPro:   IPR023214
- InterPro:   IPR006402
- InterPro:   IPR005833
- InterPro:   IPR023198 [H]

Pfam domain/function: PF00702 Hydrolase [H]

EC number: 3.1.3.21

Molecular weight: Translated: 24021; Mature: 23889

Theoretical pI: Translated: 4.89; Mature: 4.89

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.8 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
3.6 %Cys+Met (Translated Protein)
1.8 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
3.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGMQAVIFDMDGVIIDSEALWRQAQIDALAQWGATASVAECETLTKGKRLDDIAGTWCRY
CCCEEEEEECCCEEECHHHHHHHHHHHHHHHCCCCCCHHHHHHHHCCCCHHHHHHHHHHH
FQLDLAPQRLEDAILQRITRLIAAKGEPMRGVQEALRYFREAGYKIALATSSSRQVIAAV
HHHCCCHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHCCCEEEEECCCCHHHHHHH
LNKLSLWHFFDAISSADDEPRGKPHPAVYLTTLRKLNLNASQCLVIEDSFTGFCAAQSAG
HHHHHHHHHHHHHHCCCCCCCCCCCCEEHEEHHHHCCCCCCEEEEEECCCCCCHHHCCCC
IATIVIAEDSQQARFQAAAGRYQTLPELLEALSAEPAAAV
EEEEEEECCCHHHHHHHHHCHHHHHHHHHHHHCCCCCCCC
>Mature Secondary Structure 
GMQAVIFDMDGVIIDSEALWRQAQIDALAQWGATASVAECETLTKGKRLDDIAGTWCRY
CCEEEEEECCCEEECHHHHHHHHHHHHHHHCCCCCCHHHHHHHHCCCCHHHHHHHHHHH
FQLDLAPQRLEDAILQRITRLIAAKGEPMRGVQEALRYFREAGYKIALATSSSRQVIAAV
HHHCCCHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHCCCEEEEECCCCHHHHHHH
LNKLSLWHFFDAISSADDEPRGKPHPAVYLTTLRKLNLNASQCLVIEDSFTGFCAAQSAG
HHHHHHHHHHHHHHCCCCCCCCCCCCEEHEEHHHHCCCCCCEEEEEECCCCCCHHHCCCC
IATIVIAEDSQQARFQAAAGRYQTLPELLEALSAEPAAAV
EEEEEEECCCHHHHHHHHHCHHHHHHHHHHHHCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: glycerol 1-phosphate; H2O

Specific reaction: glycerol 1-phosphate + H2O = glycerol + phosphate

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]