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The map label for this gene is yeeY [H]

Identifier: 238895594

GI number: 238895594

Start: 3498419

End: 3499309

Strand: Reverse

Name: yeeY [H]

Synonym: KP1_3677

Alternate gene names: 238895594

Gene position: 3499309-3498419 (Counterclockwise)

Preceding gene: 238895595

Following gene: 238895593

Centisome position: 66.67

GC content: 63.97

Gene sequence:

>891_bases
ATGAAACCACTGCTGGATGTCCTCGTGATCCTGGATGCCCTGGAAAAAGAGGGCAGCTTTGCCGCCGCGTCGGCAAAGCT
CTTTAAAACGCCCTCGGCGCTGAGCTACACCATTCACCGCCTGGAAAGCGATCTCAATATTCAGCTGCTCGACCGCAGCG
GCCATCGCGCGCGCTTTACCCCCAGCGGACAGATGCTGCTGGAGAAAGGGCGGGAGGTGCTGCATATCGCCCGCGAACTG
GAGAACCGGGCGGTTAAGCTGCAGCAGGGGTGGGAGAATAGCCTTCGTCTGGCGGTGGACAGCACCTTTCCCGTGGCGCT
GCTCTCGCCGCCAATCGCTGCATTTTATCAACAACAGCCGCTGACCCGGCTGCACTTCACGCTGAACCCCTCCCTGCTGG
ACTGGCGGCCGCTGACTGACGGGCAGGCCGATCTGCTGCTGGGGGCGCTCGGCGAGCCGCCGCCGCTGAGCGGTTATGAC
TATCTCCCCCTCGGCGAGCTGGAGCTGCTGCTGGTCGTTGCTCCACAGCATCCGCTGGCGCGACACCGCGCACCGCTAAG
CTGGCGAACCCTGCGCCGTTACCGGGCGGTGGCCACTGGCGAGGGCGGGGCGCTACTCAGCGATCAGGAGACCCTGACGG
TGTGTGACGCCGCGGGGCAGCTGGCGCTGCTGCGCCTGGGGCTGGGCTGGGGGTGCCTGCCGCGCTATCAGGTGCAGGGT
CTGCTGGACAGCGGCGAGCTGGTCTGCATGACCGTGCGCGGGCTGTCGCCTCGTCAACGCGCGTGGATCGCCTGGAATGA
CGCCACCTGCGGTTTGGCTGGCAAATGGTGGCGGGAAACGCTATTAGCAAATAGTGCTATTTTTACAATTTATCATACGG
AAACCGTATAG

Upstream 100 bases:

>100_bases
TCTGCAATGAGCTGGGGTTTGAGTACCAGTACCCCGATCCGCTGGTGATGCCGATGGAGTGATCCGCCAGCGGTGATTCG
CATACCGTAAGGGGGTAGCG

Downstream 100 bases:

>100_bases
ATATTAGCACGTTAAAAATTATGCTTACGCAATGAACTTCATAACATCTTGTCAACGCCGTTGAATTTGTTGCAAAATAT
GCGGCCTGAAAACCAGAGAC

Product: putative LysR-family transcriptional regulator

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 296; Mature: 296

Protein sequence:

>296_residues
MKPLLDVLVILDALEKEGSFAAASAKLFKTPSALSYTIHRLESDLNIQLLDRSGHRARFTPSGQMLLEKGREVLHIAREL
ENRAVKLQQGWENSLRLAVDSTFPVALLSPPIAAFYQQQPLTRLHFTLNPSLLDWRPLTDGQADLLLGALGEPPPLSGYD
YLPLGELELLLVVAPQHPLARHRAPLSWRTLRRYRAVATGEGGALLSDQETLTVCDAAGQLALLRLGLGWGCLPRYQVQG
LLDSGELVCMTVRGLSPRQRAWIAWNDATCGLAGKWWRETLLANSAIFTIYHTETV

Sequences:

>Translated_296_residues
MKPLLDVLVILDALEKEGSFAAASAKLFKTPSALSYTIHRLESDLNIQLLDRSGHRARFTPSGQMLLEKGREVLHIAREL
ENRAVKLQQGWENSLRLAVDSTFPVALLSPPIAAFYQQQPLTRLHFTLNPSLLDWRPLTDGQADLLLGALGEPPPLSGYD
YLPLGELELLLVVAPQHPLARHRAPLSWRTLRRYRAVATGEGGALLSDQETLTVCDAAGQLALLRLGLGWGCLPRYQVQG
LLDSGELVCMTVRGLSPRQRAWIAWNDATCGLAGKWWRETLLANSAIFTIYHTETV
>Mature_296_residues
MKPLLDVLVILDALEKEGSFAAASAKLFKTPSALSYTIHRLESDLNIQLLDRSGHRARFTPSGQMLLEKGREVLHIAREL
ENRAVKLQQGWENSLRLAVDSTFPVALLSPPIAAFYQQQPLTRLHFTLNPSLLDWRPLTDGQADLLLGALGEPPPLSGYD
YLPLGELELLLVVAPQHPLARHRAPLSWRTLRRYRAVATGEGGALLSDQETLTVCDAAGQLALLRLGLGWGCLPRYQVQG
LLDSGELVCMTVRGLSPRQRAWIAWNDATCGLAGKWWRETLLANSAIFTIYHTETV

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 HTH lysR-type DNA-binding domain [H]

Homologues:

Organism=Escherichia coli, GI87082024, Length=299, Percent_Identity=57.190635451505, Blast_Score=332, Evalue=1e-92,
Organism=Escherichia coli, GI1789492, Length=284, Percent_Identity=33.0985915492958, Blast_Score=132, Evalue=2e-32,
Organism=Escherichia coli, GI1787949, Length=277, Percent_Identity=27.0758122743682, Blast_Score=104, Evalue=6e-24,
Organism=Escherichia coli, GI1786508, Length=291, Percent_Identity=27.4914089347079, Blast_Score=101, Evalue=7e-23,
Organism=Escherichia coli, GI1786713, Length=277, Percent_Identity=24.5487364620939, Blast_Score=93, Evalue=2e-20,
Organism=Escherichia coli, GI1790262, Length=174, Percent_Identity=33.3333333333333, Blast_Score=82, Evalue=6e-17,
Organism=Escherichia coli, GI1789440, Length=199, Percent_Identity=28.1407035175879, Blast_Score=66, Evalue=2e-12,
Organism=Escherichia coli, GI87081904, Length=178, Percent_Identity=29.7752808988764, Blast_Score=62, Evalue=5e-11,

Paralogues:

None

Copy number: 10-20 Molecules/Cell [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000847
- InterPro:   IPR005119
- InterPro:   IPR011991 [H]

Pfam domain/function: PF00126 HTH_1; PF03466 LysR_substrate [H]

EC number: NA

Molecular weight: Translated: 32785; Mature: 32785

Theoretical pI: Translated: 7.58; Mature: 7.58

Prosite motif: PS50931 HTH_LYSR

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
1.0 %Met     (Translated Protein)
2.4 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
1.0 %Met     (Mature Protein)
2.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKPLLDVLVILDALEKEGSFAAASAKLFKTPSALSYTIHRLESDLNIQLLDRSGHRARFT
CCHHHHHHHHHHHHHCCCCEEEHHHHHHCCCCHHHHHHHHHCCCCEEEEEECCCCEEEEC
PSGQMLLEKGREVLHIARELENRAVKLQQGWENSLRLAVDSTFPVALLSPPIAAFYQQQP
CCHHHHHHCCHHHHHHHHHHHHHEEEECCCCCCCEEEEECCCCCEEECCCCHHHHHCCCC
LTRLHFTLNPSLLDWRPLTDGQADLLLGALGEPPPLSGYDYLPLGELELLLVVAPQHPLA
CEEEEEEECCCEEECCCCCCCCHHHHEECCCCCCCCCCCCCCCCCCEEEEEEECCCCCHH
RHRAPLSWRTLRRYRAVATGEGGALLSDQETLTVCDAAGQLALLRLGLGWGCLPRYQVQG
HCCCCCCHHHHHHHHHEEECCCCEEECCCCEEEEECCCCCEEEEEECCCCCCCCCHHHHE
LLDSGELVCMTVRGLSPRQRAWIAWNDATCGLAGKWWRETLLANSAIFTIYHTETV
ECCCCCEEEEEECCCCCCCCEEEEECCCCCCCCHHHHHHHHHCCCEEEEEEEECCC
>Mature Secondary Structure
MKPLLDVLVILDALEKEGSFAAASAKLFKTPSALSYTIHRLESDLNIQLLDRSGHRARFT
CCHHHHHHHHHHHHHCCCCEEEHHHHHHCCCCHHHHHHHHHCCCCEEEEEECCCCEEEEC
PSGQMLLEKGREVLHIARELENRAVKLQQGWENSLRLAVDSTFPVALLSPPIAAFYQQQP
CCHHHHHHCCHHHHHHHHHHHHHEEEECCCCCCCEEEEECCCCCEEECCCCHHHHHCCCC
LTRLHFTLNPSLLDWRPLTDGQADLLLGALGEPPPLSGYDYLPLGELELLLVVAPQHPLA
CEEEEEEECCCEEECCCCCCCCHHHHEECCCCCCCCCCCCCCCCCCEEEEEEECCCCCHH
RHRAPLSWRTLRRYRAVATGEGGALLSDQETLTVCDAAGQLALLRLGLGWGCLPRYQVQG
HCCCCCCHHHHHHHHHEEECCCCEEECCCCEEEEECCCCCEEEEEECCCCCCCCCHHHHE
LLDSGELVCMTVRGLSPRQRAWIAWNDATCGLAGKWWRETLLANSAIFTIYHTETV
ECCCCCEEEEEECCCCCCCCEEEEECCCCCCCCHHHHHHHHHCCCEEEEEEEECCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: DNA [C]

Specific reaction: Protein + DNA = Protein-DNA [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9097040; 9278503 [H]