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The map label for this gene is virB6

Identifier: 238895549

GI number: 238895549

Start: 3453950

End: 3455029

Strand: Direct

Name: virB6

Synonym: KP1_3631

Alternate gene names: NA

Gene position: 3453950-3455029 (Clockwise)

Preceding gene: 238895548

Following gene: 238895550

Centisome position: 65.81

GC content: 46.85

Gene sequence:

>1080_bases
ATGGCCGAACTCGGTACATTTGAATTTATAGATAAACAGCTAATTGGTGGTATAACTCAATCTACCAGTGGGTTGATGAT
GGAACATTCATCAATGGTTATGGGGCTGGCCGCTGTGTCAGCCACCATATACATCATGTGGCGTGGCTACCAGACGCTGG
CGGGGAAGCTCTCCACGCCGATGGAAGACACGATGTGGGACATCATGAGAATGGCGATCATCCTGTCGTTTGTGGCTAAC
GTCAGTGGTTATCTCGATGGCGTGATCGATGCCATCAACGGTTTAAAGGAGGGTTTTTCTGGAGGCGACAATATCTGGCA
AATACTAGATACCTTATGGGATAAGGCAAAAGTTTTGGGGAAAACATTACACGATATGGATAATTCCACATATGTAAAAG
ATGAGGGGATGACCGCTCAATTTTATGTATGGCTTGGGATATTTATTCTTATGGCTTTAACAGCTTTTGTTTCGATGGTC
GCTGAGATAATGATCTTACTTCTTAGCATCACTGCGCCTATTTTTATTTTTTGCCTTATGTATGGTTTTTTGCGACCGAT
GTTTAATAACTGGTTGCAAAATATATTTGCAGCGATATTAACCGTTCTATTTTCAGCATTATCATTAAGAGTAGTCATAA
ACTTTATGACTAAAATATTAGCCCAATCTCAAGCCGGAGCTGCACAGTCAAATATTGTGGAACTAGGCGCACAGGTCTGT
TTGGCTGGTATCTGTGCCGCAATACTGGTGTATATTTCCGCTAAAGTAGCCGCAGCACTGGCCGGGGCAAGCGCTACCGT
ATCCATGCAGGGGCTGGCCGCTGTAGGTATCGGTGCTGCTTTTGGTGCCGGGAAGCTGGCCGGGGGGGGACTTAAAGAAA
CCAAACGTTCCGCCCTGGACAACATTCAGGGCTGGAAGGATGCGAATGCAGGTAAGCCCGGCAAGCCCGGAGGTGAGTTA
GGCTATAACGCTTCTAAAGCGCGTAAATACGCGATTGAGCAGATGATAGCCCGGAACGAAGCGCGGAGACTGGCACAGAG
GAGGGAATCCGCGGTTAAGAAGTTCAACAGCCAGGTCTGA

Upstream 100 bases:

>100_bases
GAGACGCTTCTGAAAACTGCAAAAACGCAAATGAAGCCCATTATCAAATACAGCAATTAAACGCACCAACGCTAAAATTC
CATGATTAGAGAGGTTCTTT

Downstream 100 bases:

>100_bases
CGTCTCCAGTTCATCCCCCCAAAATATCAGCCTATGAAAATATAATTATATTTTCATATTCCTAATCTAGTTGAGGAAAT
CTTTGATGAAACGCTTGATT

Product: type IV secretion system VirB6 component

Products: NA

Alternate protein names: TrbL/VirB6 Plasmid Conjugal Transfer Protein; Type IV Secretory Pathway VirB6 Component; Conjugal Transfer Protein; TriE Conjugal Transfer Protein; Type IV Secretion System VirB6 Component; Conjugal Transfer Protein TriE; Conjugal Transfer; Pilx6 Protein

Number of amino acids: Translated: 359; Mature: 358

Protein sequence:

>359_residues
MAELGTFEFIDKQLIGGITQSTSGLMMEHSSMVMGLAAVSATIYIMWRGYQTLAGKLSTPMEDTMWDIMRMAIILSFVAN
VSGYLDGVIDAINGLKEGFSGGDNIWQILDTLWDKAKVLGKTLHDMDNSTYVKDEGMTAQFYVWLGIFILMALTAFVSMV
AEIMILLLSITAPIFIFCLMYGFLRPMFNNWLQNIFAAILTVLFSALSLRVVINFMTKILAQSQAGAAQSNIVELGAQVC
LAGICAAILVYISAKVAAALAGASATVSMQGLAAVGIGAAFGAGKLAGGGLKETKRSALDNIQGWKDANAGKPGKPGGEL
GYNASKARKYAIEQMIARNEARRLAQRRESAVKKFNSQV

Sequences:

>Translated_359_residues
MAELGTFEFIDKQLIGGITQSTSGLMMEHSSMVMGLAAVSATIYIMWRGYQTLAGKLSTPMEDTMWDIMRMAIILSFVAN
VSGYLDGVIDAINGLKEGFSGGDNIWQILDTLWDKAKVLGKTLHDMDNSTYVKDEGMTAQFYVWLGIFILMALTAFVSMV
AEIMILLLSITAPIFIFCLMYGFLRPMFNNWLQNIFAAILTVLFSALSLRVVINFMTKILAQSQAGAAQSNIVELGAQVC
LAGICAAILVYISAKVAAALAGASATVSMQGLAAVGIGAAFGAGKLAGGGLKETKRSALDNIQGWKDANAGKPGKPGGEL
GYNASKARKYAIEQMIARNEARRLAQRRESAVKKFNSQV
>Mature_358_residues
AELGTFEFIDKQLIGGITQSTSGLMMEHSSMVMGLAAVSATIYIMWRGYQTLAGKLSTPMEDTMWDIMRMAIILSFVANV
SGYLDGVIDAINGLKEGFSGGDNIWQILDTLWDKAKVLGKTLHDMDNSTYVKDEGMTAQFYVWLGIFILMALTAFVSMVA
EIMILLLSITAPIFIFCLMYGFLRPMFNNWLQNIFAAILTVLFSALSLRVVINFMTKILAQSQAGAAQSNIVELGAQVCL
AGICAAILVYISAKVAAALAGASATVSMQGLAAVGIGAAFGAGKLAGGGLKETKRSALDNIQGWKDANAGKPGKPGGELG
YNASKARKYAIEQMIARNEARRLAQRRESAVKKFNSQV

Specific function: Unknown

COG id: COG3704

COG function: function code U; Type IV secretory pathway, VirB6 components

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 38593; Mature: 38462

Theoretical pI: Translated: 9.01; Mature: 9.01

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
5.6 %Met     (Translated Protein)
6.4 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
5.3 %Met     (Mature Protein)
6.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAELGTFEFIDKQLIGGITQSTSGLMMEHSSMVMGLAAVSATIYIMWRGYQTLAGKLSTP
CCCCCHHHHHHHHHHCCHHHCCCCHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHCCCC
MEDTMWDIMRMAIILSFVANVSGYLDGVIDAINGLKEGFSGGDNIWQILDTLWDKAKVLG
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHH
KTLHDMDNSTYVKDEGMTAQFYVWLGIFILMALTAFVSMVAEIMILLLSITAPIFIFCLM
HHHHHCCCCCEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
YGFLRPMFNNWLQNIFAAILTVLFSALSLRVVINFMTKILAQSQAGAAQSNIVELGAQVC
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHH
LAGICAAILVYISAKVAAALAGASATVSMQGLAAVGIGAAFGAGKLAGGGLKETKRSALD
HHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHH
NIQGWKDANAGKPGKPGGELGYNASKARKYAIEQMIARNEARRLAQRRESAVKKFNSQV
HCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
>Mature Secondary Structure 
AELGTFEFIDKQLIGGITQSTSGLMMEHSSMVMGLAAVSATIYIMWRGYQTLAGKLSTP
CCCCHHHHHHHHHHCCHHHCCCCHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHCCCC
MEDTMWDIMRMAIILSFVANVSGYLDGVIDAINGLKEGFSGGDNIWQILDTLWDKAKVLG
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHH
KTLHDMDNSTYVKDEGMTAQFYVWLGIFILMALTAFVSMVAEIMILLLSITAPIFIFCLM
HHHHHCCCCCEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
YGFLRPMFNNWLQNIFAAILTVLFSALSLRVVINFMTKILAQSQAGAAQSNIVELGAQVC
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHH
LAGICAAILVYISAKVAAALAGASATVSMQGLAAVGIGAAFGAGKLAGGGLKETKRSALD
HHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHH
NIQGWKDANAGKPGKPGGELGYNASKARKYAIEQMIARNEARRLAQRRESAVKKFNSQV
HCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA